CuGenDBv2

Gene ID	Lsi07G005990
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Ankyrin repeat-containing protein
Genome location	chr07:6412450..6412983
RNA-Seq Expression	Lsi07G005990
Synteny	Lsi07G005990
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	IPR026961 - PGG domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0051191.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]

1.2e-46

63.28

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAIG
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG

TYK03713.1 receptor-interacting serine/threonine-protein kinase 4-like [Cucumis melo var. makuwa]

1.2e-46

63.28

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAIG
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG

XP_008447612.1 PREDICTED: uncharacterized protein LOC103490026 [Cucumis melo]

2.4e-47

63.48

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAIGY
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY

XP_011649355.1 uncharacterized protein LOC101212496 [Cucumis sativus]

8.2e-48

64.2

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KARN K +R E   L T     G WK  KKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  + T    +E+ M FGLY  
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY
         +  N T++F AGT V++ QQ E+Y  Y+W+NT+SF  SM+VILMIV R PLKNR+CS LLA AMCIAV+ LAIGY
Subjt:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY

XP_016903124.1 PREDICTED: uncharacterized protein LOC107992044 [Cucumis melo]

6.7e-42

58.19

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Query:  KARNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K++R E    + +  TG+WK  +KK LKYKG+W++EVQ TMMLVATVIATVTFQ GVN   GVWQQDT F+Y+S   N+T+         GLYS 
Subjt:  KARNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY
        L+   N+T+V PAGT+++ YQQ E YW YLWINT+SF  SMS++LMIV R  L+NR+CS LL +A CIAVV LAIGY
Subjt:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMQ1 ANK_REP_REGION domain-containing protein

2.0e-47

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KARN K +R E   L T     G WK  KKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  + T    +E+ M FGLY  
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG
         +  N T++F AGT V++ QQ E+Y  Y+W+NT+SF  SM+VILMIV R PLKNR+CS LLA AMCIAV+ LAIG
Subjt:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG

A0A1S3BIS1 uncharacterized protein LOC103490026

1.2e-47

63.48

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAIGY
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY

A0A1S4E4H3 uncharacterized protein LOC107992044

3.3e-42

58.19

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Query:  KARNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K++R E    + +  TG+WK  +KK LKYKG+W++EVQ TMMLVATVIATVTFQ GVN   GVWQQDT F+Y+S   N+T+         GLYS 
Subjt:  KARNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY
        L+   N+T+V PAGT+++ YQQ E YW YLWINT+SF  SMS++LMIV R  L+NR+CS LL +A CIAVV LAIGY
Subjt:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGY

A0A5A7UCE2 Ankyrin repeat-containing protein

5.7e-47

63.28

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAIG
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG

A0A5D3BVH5 Receptor-interacting serine/threonine-protein kinase 4-like

5.7e-47

63.28

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Query:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KARNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAIG
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13950.1 unknown protein

4.8e-14

35.33

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Query:  KKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWA
        K LK +GDW+++ +G +M+ ATVIA ++FQ  VNP  GVWQ D     + SF N T                 G        AGTAVL Y+  +   Y  
Subjt:  KKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWA

Query:  YLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGYF
         +  +T+SF TSMS+IL+++    L+NR+   +L   M +AV+ ++  +F
Subjt:  YLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGYF

AT4G13266.1 unknown protein

4.7e-09

27.7

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Query:  LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWAYL
        L ++GDW+++ +G +++ ATVIA ++F   VNP  GVWQ +      SS   TT+ +                 +T     GT++L +   +   Y   +
Subjt:  LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWAYL

Query:  WINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGYF
          N +SF  SM +I +++     +NRL   ++ M M +AV+ ++  +F
Subjt:  WINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGYF

Sequences

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CDS sequence

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ATGAAAAAGGCAAGAAACCCCAAAAAACAAAGAGTAGAATTTGCACGGTTGAGAACAGGGCGGTGGAAGTCATTGAAGAAGAAACTAAAATACAAAGGGGATTGGGTTCA
AGAAGTGCAAGGCACAATGATGCTTGTGGCTACCGTGATTGCAACGGTAACTTTTCAAGGGGGAGTGAATCCTTCGGACGGCGTTTGGCAACAAGACACTCAATTCACTT
ATTCTTCGAGTTTCAACAATACTACATATCCTTCTCATGAATACGACATGGCCTTCGGCTTATATAGCGACCTTGCTGGCATTAACAAGACAATTGTATTTCCAGCTGGA
ACTGCAGTACTGAGATACCAACAATTCGAGCTATACTGGGCATACTTATGGATTAACACAATATCGTTCTTCACATCGATGAGCGTGATTTTGATGATCGTCGGCCGATG
TCCGCTAAAAAATAGGCTTTGTAGTTTGCTATTGGCCATGGCCATGTGCATAGCAGTGGTATTCTTAGCAATTGGGTACTTTCGGTATGGTTAA

mRNA sequence

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Protein sequence

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MKKARNPKKQRVEFARLRTGRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAG
TAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIGYFRYG

Lsi07G005990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome