; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G006000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G006000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationchr07:6423039..6424145
RNA-Seq ExpressionLsi07G006000
SyntenyLsi07G006000
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058458.1 inversin-A-like isoform X2 [Cucumis melo var. makuwa]1.2e-4149.07Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNE+EIRI M S+ EEN RK+YE T+KGCIESLK LMEEDPY+IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+SACF YD++G IPLHYAV+SGQ +++Q+L+K RPRSLWMKL +NGQTVLHLCVE+NHLE +K LIETYVN DEDFLN+ 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTLRK
        D +G+TILDLSM LR+
Subjt:  DHNGDTILDLSMTLRK

KAG6581828.1 hypothetical protein SDJN03_21830, partial [Cucurbita argyrosperma subsp. sororia]6.4e-3859.18Show/hide
Query:  EEINNEQEIRIPMCSNNEE-NIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVL
        ++    QEIRI M S  +      ++ A+K G I++++ L+E       NN SAC  YDN+GFIPLHYAVI+GQ++IM+ELI ARP+S+WMKL++G+T+L
Subjt:  EEINNEQEIRIPMCSNNEE-NIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVL

Query:  HLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTLRKS
        HLCVE+NHL+GIKLLIET++N  E FLNTTD NG+TILDLSMTLRKS
Subjt:  HLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTLRKS

XP_004141216.1 uncharacterized protein LOC101203970 [Cucumis sativus]3.1e-4050Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNEQEIRI M S  +ENIRK+Y A +KGCIESLK L+EEDP +IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+++ F YD++G IPLHYAV+SGQ +IMQ+LIKARPRSLWMKL +NGQTVLHLCVE+NHLEG+K LIETYVN DEDFLNT 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTL
        D NG+TILDLSM L
Subjt:  DHNGDTILDLSMTL

XP_008464012.1 PREDICTED: uncharacterized protein LOC103501999 isoform X1 [Cucumis melo]1.2e-4149.07Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNE+EIRI M S+ EEN RK+YE T+KGCIESLK LMEEDPY+IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+SACF YD++G IPLHYAV+SGQ +++Q+L+K RPRSLWMKL +NGQTVLHLCVE+NHLE +K LIETYVN DEDFLN+ 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTLRK
        D +G+TILDLSM LR+
Subjt:  DHNGDTILDLSMTLRK

XP_008464013.1 PREDICTED: inversin-A-like isoform X2 [Cucumis melo]1.2e-4149.07Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNE+EIRI M S+ EEN RK+YE T+KGCIESLK LMEEDPY+IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+SACF YD++G IPLHYAV+SGQ +++Q+L+K RPRSLWMKL +NGQTVLHLCVE+NHLE +K LIETYVN DEDFLN+ 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTLRK
        D +G+TILDLSM LR+
Subjt:  DHNGDTILDLSMTLRK

TrEMBL top hitse value%identityAlignment
A0A0A0LFQ3 ANK_REP_REGION domain-containing protein1.5e-4050Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNEQEIRI M S  +ENIRK+Y A +KGCIESLK L+EEDP +IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+++ F YD++G IPLHYAV+SGQ +IMQ+LIKARPRSLWMKL +NGQTVLHLCVE+NHLEG+K LIETYVN DEDFLNT 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTL
        D NG+TILDLSM L
Subjt:  DHNGDTILDLSMTL

A0A1S3CKK7 inversin-A-like isoform X26.0e-4249.07Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNE+EIRI M S+ EEN RK+YE T+KGCIESLK LMEEDPY+IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+SACF YD++G IPLHYAV+SGQ +++Q+L+K RPRSLWMKL +NGQTVLHLCVE+NHLE +K LIETYVN DEDFLN+ 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTLRK
        D +G+TILDLSM LR+
Subjt:  DHNGDTILDLSMTLRK

A0A1S3CM14 uncharacterized protein LOC103501999 isoform X16.0e-4249.07Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNE+EIRI M S+ EEN RK+YE T+KGCIESLK LMEEDPY+IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+SACF YD++G IPLHYAV+SGQ +++Q+L+K RPRSLWMKL +NGQTVLHLCVE+NHLE +K LIETYVN DEDFLN+ 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTLRK
        D +G+TILDLSM LR+
Subjt:  DHNGDTILDLSMTLRK

A0A5A7UTH2 Inversin-A-like isoform X26.0e-4249.07Show/hide
Query:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------
        ME  NNE+EIRI M S+ EEN RK+YE T+KGCIESLK LMEEDPY+IQ                                                   
Subjt:  MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQ---------------------------------------------------

Query:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT
                           N+SACF YD++G IPLHYAV+SGQ +++Q+L+K RPRSLWMKL +NGQTVLHLCVE+NHLE +K LIETYVN DEDFLN+ 
Subjt:  ------------------NNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKL-HNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTT

Query:  DHNGDTILDLSMTLRK
        D +G+TILDLSM LR+
Subjt:  DHNGDTILDLSMTLRK

A0A6J1GV64 uncharacterized protein LOC111457477 isoform X11.2e-3758.5Show/hide
Query:  EEINNEQEIRIPMCSNNEE-NIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVL
        ++    QEIRI M S  +      ++ A+K G I++++ L+E       NN SAC  YDN+GFIPLHYAVI+GQ++IM+E I ARP+S+WMKL++G+T+L
Subjt:  EEINNEQEIRIPMCSNNEE-NIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVL

Query:  HLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTLRKS
        HLCVE++HLEGIKLLIET++N  E FLNTTD NG+TILDLSMTLRKS
Subjt:  HLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTLRKS

SwissProt top hitse value%identityAlignment
Q804S5 E3 ubiquitin-protein ligase mib11.7e-0440.98Show/hide
Query:  DNNGFIPLHYAVISGQMNIMQELIKARPRSLWM---KLHNGQTVLHLCVENNHLEGIKLLI
        +NNGF  LH+A + G  + M+ L+   PR  W+   K  +G T LHL   NNH+E  +LL+
Subjt:  DNNGFIPLHYAVISGQMNIMQELIKARPRSLWM---KLHNGQTVLHLCVENNHLEGIKLLI

Q80SY4 E3 ubiquitin-protein ligase MIB11.7e-0440.98Show/hide
Query:  DNNGFIPLHYAVISGQMNIMQELIKARPRSLWM---KLHNGQTVLHLCVENNHLEGIKLLI
        +NNGF  LH+A + G  + M+ L+   PR  W+   K  +G T LHL   NNH+E  +LL+
Subjt:  DNNGFIPLHYAVISGQMNIMQELIKARPRSLWM---KLHNGQTVLHLCVENNHLEGIKLLI

Q86YT6 E3 ubiquitin-protein ligase MIB11.7e-0440.98Show/hide
Query:  DNNGFIPLHYAVISGQMNIMQELIKARPRSLWM---KLHNGQTVLHLCVENNHLEGIKLLI
        +NNGF  LH+A + G  + M+ L+   PR  W+   K  +G T LHL   NNH+E  +LL+
Subjt:  DNNGFIPLHYAVISGQMNIMQELIKARPRSLWM---KLHNGQTVLHLCVENNHLEGIKLLI

Q8GYH5 Ankyrin repeat-containing protein BDA16.7e-0626.15Show/hide
Query:  NEENIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLL--
        NE  +  ++ A +   +E   +L++ DP L++            G  PLH     G ++++ + + A P S+     NG+T+LH+ + N+  E +K+L  
Subjt:  NEENIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLL--

Query:  -IETYVNHDE---DFLNTTDHNGDTILDLS
         ++   + D+   D LN  D  G+T+L L+
Subjt:  -IETYVNHDE---DFLNTTDHNGDTILDLS

Q9VUX2 E3 ubiquitin-protein ligase mind-bomb2.0e-0527.42Show/hide
Query:  NNEENIRKVYEATKKGCIESLKKLMEED--PYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKL
        NN      ++ A  KG   ++K L+ +   P++++          ++G+  LH A ++  + I + L+     ++  +  N QT LHL VE  H++ +KL
Subjt:  NNEENIRKVYEATKKGCIESLKKLMEED--PYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKL

Query:  LIETYVNHDEDFLNTTDHNGDTIL
        L++     D   LN  D +GDT L
Subjt:  LIETYVNHDEDFLNTTDHNGDTIL

Arabidopsis top hitse value%identityAlignment
AT1G10340.1 Ankyrin repeat family protein1.8e-0628.57Show/hide
Query:  NGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTL
        NG  PLH AV+ G + I++E +   P S      + +TV HL   N +++    + E+   + +  L  TD +G+T+L ++ ++
Subjt:  NGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTL

AT1G10340.2 Ankyrin repeat family protein1.8e-0628.57Show/hide
Query:  NGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTL
        NG  PLH AV+ G + I++E +   P S      + +TV HL   N +++    + E+   + +  L  TD +G+T+L ++ ++
Subjt:  NGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTL

AT4G03500.1 Ankyrin repeat family protein2.8e-0728.87Show/hide
Query:  YLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLLIETYVN-HDEDFLNTTDHNGDTILDLS
        YL   N    +  D++G  P H A   G + I++E++K  P ++ +   +GQ +LHL  +   L+ IK ++    + + +  +N  D NG+T L L+
Subjt:  YLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLLIETYVN-HDEDFLNTTDHNGDTILDLS

AT4G11000.1 Ankyrin repeat family protein2.1e-0730.15Show/hide
Query:  SNNEENI-RKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGF--IPLHYAVISGQMNIMQELIKARPRSLWMKLH-NGQTVLHLCVENNHLEG
        S  +ENI  ++    + G IE L +L+ EDP ++ +       +D   F   PLH A   GQ +   EL+  +P SL +KL+ +G + LHL ++NNH++ 
Subjt:  SNNEENI-RKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGF--IPLHYAVISGQMNIMQELIKARPRSLWMKLH-NGQTVLHLCVENNHLEG

Query:  IKLLIETYVNHDEDFLNTTDHNGDTILDLSMTLRKS
        + L      N  E  L+  D +G+T+  ++  + ++
Subjt:  IKLLIETYVNHDEDFLNTTDHNGDTILDLSMTLRKS

AT5G54610.1 ankyrin4.8e-0726.15Show/hide
Query:  NEENIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLL--
        NE  +  ++ A +   +E   +L++ DP L++            G  PLH     G ++++ + + A P S+     NG+T+LH+ + N+  E +K+L  
Subjt:  NEENIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLEGIKLL--

Query:  -IETYVNHDE---DFLNTTDHNGDTILDLS
         ++   + D+   D LN  D  G+T+L L+
Subjt:  -IETYVNHDE---DFLNTTDHNGDTILDLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGATCAATAATGAGCAAGAAATTAGAATTCCGATGTGTTCTAATAATGAAGAAAATATAAGAAAGGTGTATGAGGCAACAAAGAAGGGATGTATTGAAAGCTT
GAAGAAACTGATGGAAGAAGATCCATATCTCATTCAAAATAACATCAGTGCTTGCTTTCCTTACGATAATAATGGGTTCATTCCTCTCCACTATGCAGTAATTTCTGGAC
AAATGAATATCATGCAAGAGCTGATCAAAGCAAGGCCACGATCTCTTTGGATGAAGCTCCACAATGGTCAAACTGTTCTACATTTATGTGTTGAAAATAACCATTTGGAG
GGCATAAAGTTGCTTATTGAAACATATGTGAATCATGATGAAGACTTCCTAAATACAACTGATCACAACGGGGACACTATTTTGGATCTATCAATGACGCTCAGAAAAAG
T
mRNA sequenceShow/hide mRNA sequence
AGAGAATAATGGAGGAGATCAATAATGAGCAAGAAATTAGAATTCCGATGTGTTCTAATAATGAAGAAAATATAAGAAAGGTGTATGAGGCAACAAAGAAGGGATGTATT
GAAAGCTTGAAGAAACTGATGGAAGAAGATCCATATCTCATTCAAAATAACATCAGTGCTTGCTTTCCTTACGATAATAATGGGTTCATTCCTCTCCACTATGCAGTAAT
TTCTGGACAAATGAATATCATGCAAGAGCTGATCAAAGCAAGGCCACGATCTCTTTGGATGAAGCTCCACAATGGTCAAACTGTTCTACATTTATGTGTTGAAAATAACC
ATTTGGAGGGCATAAAGTTGCTTATTGAAACATATGTGAATCATGATGAAGACTTCCTAAATACAACTGATCACAACGGGGACACTATTTTGGATCTATCAATGACGCTC
AGAAAAAGT
Protein sequenceShow/hide protein sequence
MEEINNEQEIRIPMCSNNEENIRKVYEATKKGCIESLKKLMEEDPYLIQNNISACFPYDNNGFIPLHYAVISGQMNIMQELIKARPRSLWMKLHNGQTVLHLCVENNHLE
GIKLLIETYVNHDEDFLNTTDHNGDTILDLSMTLRKS