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Lsi07G006170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G006170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationchr07:6651312..6651936
RNA-Seq ExpressionLsi07G006170
SyntenyLsi07G006170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463997.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]3.3e-2774.67Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFSPPPPFPPP
        MERPLTTLIFVISGFAFSVLSLLVESQT D AN TL     SPP+PSPPPPSP PPPP L PPPPPPPPPP    P PSPSPPPFSP PP       PPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFSPPPPFPPP

Query:  PPPRRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV
           RRSPPP  ASS++ +KK PPVPP NINTNQ SK+SLNKGKKVGLFFV
Subjt:  PPPRRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV

XP_011651738.2 LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]1.6e-2675.51Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFSPPPPFPPPPPP
        MERPLTTLIFVI+GFAFSVLSLLVESQT DGAN TL     SPP PS PPPSP PPPP L PPPPPP PPPP  P   PPP   PPPFSPPPP PPP   
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFSPPPPFPPPPPP

Query:  RRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV
        RR+PPP  ASS++ +KK PPVPP NINTNQGSK+SLNKGKKVGLFFV
Subjt:  RRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV

XP_022998566.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]7.9e-1362.43Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP----------PPPPPP--PPPPLPS--PSPPPFSPPP
        MERPL+T IFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP LSPP          PP  PP  PPPP P+  P PP F PPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP----------PPPPPP--PPPPLPS--PSPPPFSPPP

Query:  ----PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV
            P SPPP FPPPP P     RS   PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFV
Subjt:  ----PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV

XP_023523257.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]5.1e-1263.64Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPP--PPPPPPPPLPS---PSPPPFSPPPP---FSPPP
        MERP +TLIFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP   PPPP  PP  PPPP P+   P PP F PPPP    SPPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPP--PPPPPPPPLPS---PSPPPFSPPPP---FSPPP

Query:  PFPPPPPP------RRSPPPS---HASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV
        P  PPPP       R +PPPS    ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFV
Subjt:  PFPPPPPP------RRSPPPS---HASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV

XP_038900729.1 proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]2.1e-3484Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSP-PPPPPPPPPPPLPSPSPPPFSP-PPPFSPPPPFPPPP
        MERPLTTLIFVISGFAFSVLSLLVESQTQDGAN TL     SPPIPSPPPPSPPPPPP LSP PPPPPPPPPPP+ SP PPP SP PPPFSPPPPFP P 
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSP-PPPPPPPPPPPLPSPSPPPFSP-PPPFSPPPPFPPPP

Query:  PPRRSPPPSHASSIQNRKKSPPVPPNNI-NTNQGSKQSLNKGKKVGLFFV
        PPRR PPP HAS  +N KKSPPVPP NI NTNQGSK+SLNKGKKVGLFFV
Subjt:  PPRRSPPPSHASSIQNRKKSPPVPPNNI-NTNQGSKQSLNKGKKVGLFFV

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein9.4e-2876.19Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFSPPPPFPPPPPP
        MERPLTTLIFVI+GFAFSVLSLLVESQT DGAN TL     SPP PS PPPSP PPPP L PPPPPPPPPPP  P   PPP   PPPFSPPPP PPP   
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFSPPPPFPPPPPP

Query:  RRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV
        RR+PPP  ASS++ +KK PPVPP NINTNQGSK+SLNKGKKVGLFFV
Subjt:  RRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV

A0A1S3CKG6 leucine-rich repeat extensin-like protein 31.6e-2774.67Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFSPPPPFPPP
        MERPLTTLIFVISGFAFSVLSLLVESQT D AN TL     SPP+PSPPPPSP PPPP L PPPPPPPPPP    P PSPSPPPFSP PP       PPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFSPPPPFPPP

Query:  PPPRRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV
           RRSPPP  ASS++ +KK PPVPP NINTNQ SK+SLNKGKKVGLFFV
Subjt:  PPPRRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV

A0A5N6QK60 Uncharacterized protein1.1e-0450Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSP-PPPFSPPPPFPPPP-
        ME PL TL+ +I GFA  +L+LL ESQ   G N      + +PP PSPPPP PP PPP   PPPPPPP PPPP P P PPP  P PPP SPPPP P PP 
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSP-PPPFSPPPPFPPPP-

Query:  ---PPRRS------------PPPSHASSIQ------NRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV
           PP  S            PPP H S+ Q      +R++ PP P         SKQ +N GKKVGLFFV
Subjt:  ---PPRRS------------PPPSHASSIQ------NRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFV

A0A6J1G9A4 leucine-rich repeat extensin-like protein 39.4e-1263.92Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPP--FSPPPPFPPPP
        MERP +TLIFVISGFAFS+LSLLVESQ +DGA  + SPP   PP PSPPPPSPPPPPP   PPPP  PP  PP PSPSP    PPPP   SPPPP  PPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPP--FSPPPPFPPPP

Query:  PPRRS--------PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV
        P   S        PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFV
Subjt:  PPRRS--------PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV

A0A6J1KAI1 leucine-rich repeat extensin-like protein 33.8e-1362.43Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP----------PPPPPP--PPPPLPS--PSPPPFSPPP
        MERPL+T IFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP LSPP          PP  PP  PPPP P+  P PP F PPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP----------PPPPPP--PPPPLPS--PSPPPFSPPP

Query:  ----PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV
            P SPPP FPPPP P     RS   PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFV
Subjt:  ----PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCAAGATGGAGCCAATTCTACTCTCTC
GCCGCCGATTGTGTCTCCGCCGATACCTTCTCCACCGCCTCCCTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCACCCCCGCCTCCGCCTCCGCCTCCGC
TTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCATTTTCCCCACCCCCTCCATTTCCACCGCCTCCGCCACCTCGCCGTAGTCCGCCGCCCTCTCATGCATCC
TCCATACAGAATAGAAAAAAATCGCCACCAGTGCCTCCGAATAACATTAATACTAATCAAGGGTCGAAGCAAAGTCTCAATAAGGGGAAGAAAGTTGGGTTGTTCTTTGT
AGAGCCGAGGAGTGTAGAAGAATTCTTGAGGATATGGCGGTCATCGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCAAGATGGAGCCAATTCTACTCTCTC
GCCGCCGATTGTGTCTCCGCCGATACCTTCTCCACCGCCTCCCTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCACCCCCGCCTCCGCCTCCGCCTCCGC
TTCCATCGCCATCTCCTCCCCCATTTTCCCCACCGCCTCCATTTTCCCCACCCCCTCCATTTCCACCGCCTCCGCCACCTCGCCGTAGTCCGCCGCCCTCTCATGCATCC
TCCATACAGAATAGAAAAAAATCGCCACCAGTGCCTCCGAATAACATTAATACTAATCAAGGGTCGAAGCAAAGTCTCAATAAGGGGAAGAAAGTTGGGTTGTTCTTTGT
AGAGCCGAGGAGTGTAGAAGAATTCTTGAGGATATGGCGGTCATCGAGCTAA
Protein sequenceShow/hide protein sequence
MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFSPPPPFPPPPPPRRSPPPSHAS
SIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVEPRSVEEFLRIWRSSS