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Lsi07G006380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G006380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin-conjugating enzyme E2 34-like
Genome locationchr07:6816004..6816991
RNA-Seq ExpressionLsi07G006380
SyntenyLsi07G006380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19187.1 uncharacterized protein E5676_scaffold522G001220 [Cucumis melo var. makuwa]2.7e-6681.99Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS
        MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q  K AS EEETGRK LAQEKK+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        GP+Y+ ATT +GRPRRRPMSGPIASLFNPSMRTE EIPYMCL QLS  N+NHNYGPIYLVT
Subjt:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

XP_008460365.1 PREDICTED: uncharacterized protein LOC103499209 isoform X2 [Cucumis melo]1.3e-6581.37Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS
        MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q  K AS EEE GRK LAQEKK+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        GP+Y+ ATT +GRPRRRPMSGPIASLFNPSMRTE EIPYMCL QLS  N+NHNYGPIYLVT
Subjt:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

XP_011651731.1 uncharacterized protein LOC101209455 [Cucumis sativus]2.8e-7185.71Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS
        MKKSIS DYEM++PGFDDFD+GLNFSKFLEEAKHHA++Q FK AS EEET RKWLAQEKK+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        GPIY+ A TIDGRPRRRPMSGPIASLFNP+MRTE EIPYMCLHQLS  NTN NYGPIYLVT
Subjt:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

XP_022152626.1 uncharacterized protein LOC111020302 [Momordica charantia]7.1e-6781.6Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKA--STEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERN-PHTPNKRRVH
        M KS+SPD EMDDPGFD+FD  L+FSKFLEEAKHHA+ QDFKA  STEEE GRKWL QEKKSKKSWK T+FSWLKSDKK+KPLPKPE N PHT +KR VH
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKA--STEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERN-PHTPNKRRVH

Query:  VSGPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        VSGPIYT A T DGRPRRRP SGPIASLFNPSMRTEMEIPYMCLHQL++ N++HNYGPIYLVT
Subjt:  VSGPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

XP_038895377.1 uncharacterized protein LOC120083617 [Benincasa hispida]3.5e-7487.5Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSG
        M KS+SPDYEMDDPGFDD DL LNFSKFL+EAK HA EQDFKASTEEETGRKWLAQEKKSKKSWKNTLFSWLKS+KKTKP+PKPE+NPHTPNKRRVHVSG
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSG

Query:  PIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        PIYT ATT D RPRR PMSGPIASLFNPSMRT+MEIPYM LHQL+T N+NH YGPIYLVT
Subjt:  PIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LC20 Uncharacterized protein1.4e-7185.71Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS
        MKKSIS DYEM++PGFDDFD+GLNFSKFLEEAKHHA++Q FK AS EEET RKWLAQEKK+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        GPIY+ A TIDGRPRRRPMSGPIASLFNP+MRTE EIPYMCLHQLS  NTN NYGPIYLVT
Subjt:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

A0A1S3CDK1 uncharacterized protein LOC103499209 isoform X26.5e-6681.37Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS
        MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q  K AS EEE GRK LAQEKK+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        GP+Y+ ATT +GRPRRRPMSGPIASLFNPSMRTE EIPYMCL QLS  N+NHNYGPIYLVT
Subjt:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

A0A5A7UEH5 Uncharacterized protein6.5e-6681.37Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS
        MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q  K AS EEE GRK LAQEKK+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        GP+Y+ ATT +GRPRRRPMSGPIASLFNPSMRTE EIPYMCL QLS  N+NHNYGPIYLVT
Subjt:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

A0A5D3D6L0 Uncharacterized protein1.3e-6681.99Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS
        MKKS S DYEM++ GFDDFD+GLNFS FLEEAKHHA+ Q  K AS EEETGRK LAQEKK+KKSWKNTLFSWLKSDKK+K LPKPE+NPHTPNKRRV+VS
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFK-ASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVS

Query:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        GP+Y+ ATT +GRPRRRPMSGPIASLFNPSMRTE EIPYMCL QLS  N+NHNYGPIYLVT
Subjt:  GPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

A0A6J1DIA9 uncharacterized protein LOC1110203023.5e-6781.6Show/hide
Query:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKA--STEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERN-PHTPNKRRVH
        M KS+SPD EMDDPGFD+FD  L+FSKFLEEAKHHA+ QDFKA  STEEE GRKWL QEKKSKKSWK T+FSWLKSDKK+KPLPKPE N PHT +KR VH
Subjt:  MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKA--STEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERN-PHTPNKRRVH

Query:  VSGPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT
        VSGPIYT A T DGRPRRRP SGPIASLFNPSMRTEMEIPYMCLHQL++ N++HNYGPIYLVT
Subjt:  VSGPIYTAATTIDGRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCTATTTCTCCTGATTATGAGATGGACGATCCTGGTTTTGATGATTTTGATCTTGGTCTCAATTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCATC
AGAACAAGATTTCAAGGCCTCCACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCATGGTTGAAAA
GTGACAAAAAGACCAAGCCTCTGCCTAAACCAGAAAGAAATCCTCACACACCCAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACTGCAGCTACGACCATTGAT
GGCAGACCCCGACGCCGTCCGATGTCTGGACCGATTGCTAGCCTCTTCAATCCTAGTATGAGAACAGAGATGGAGATCCCATATATGTGTCTCCACCAGCTTTCTACCTC
CAATACCAATCACAATTATGGTCCAATTTATCTTGTTACATAG
mRNA sequenceShow/hide mRNA sequence
TGGAAAGATAACAATAACAATGTGTAATTGAATTCTAAATGGAGTTCTTCAATTGGTGGTAATTGGAGTTTGCTCCTTTTGATTTTGATGCATAAGTTAAGAGCTTCTTC
TTCTTCTTCTTCTATTTTACCTCTTTTGAAGGTAGAATTTCTTTTTATGCTTTTTTGGCTTCATTCCAGAATTCTACCTGCCATTTCTTCTGAACCAAGCTTCCTTATTT
TGCTTTTCTTTTTCCTACTTGGGGAGCATTGGCAGAAAAACATGAACCACAAGAAATACAAAAAACATCCTGAAAGCTGACAAAAGTTGATCCCCAAATTTCATGTGTCC
AACTCTCCGTTATTTCTTGTCTCCTACCTCTTCTCTCTGATATTTTTTTCTGGACTTATTTAGTAGTTTGGTTGGCTATCTCTTGTTCAATGAAGAAATCTATTTCTCCT
GATTATGAGATGGACGATCCTGGTTTTGATGATTTTGATCTTGGTCTCAATTTTTCCAAGTTCTTGGAAGAAGCAAAACATCATGCATCAGAACAAGATTTCAAGGCCTC
CACAGAAGAAGAAACAGGAAGGAAATGGTTGGCACAAGAGAAAAAGAGCAAGAAATCATGGAAAAACACACTCTTCTCATGGTTGAAAAGTGACAAAAAGACCAAGCCTC
TGCCTAAACCAGAAAGAAATCCTCACACACCCAATAAAAGACGTGTTCATGTTTCTGGTCCAATTTACACTGCAGCTACGACCATTGATGGCAGACCCCGACGCCGTCCG
ATGTCTGGACCGATTGCTAGCCTCTTCAATCCTAGTATGAGAACAGAGATGGAGATCCCATATATGTGTCTCCACCAGCTTTCTACCTCCAATACCAATCACAATTATGG
TCCAATTTATCTTGTTACATAG
Protein sequenceShow/hide protein sequence
MKKSISPDYEMDDPGFDDFDLGLNFSKFLEEAKHHASEQDFKASTEEETGRKWLAQEKKSKKSWKNTLFSWLKSDKKTKPLPKPERNPHTPNKRRVHVSGPIYTAATTID
GRPRRRPMSGPIASLFNPSMRTEMEIPYMCLHQLSTSNTNHNYGPIYLVT