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Lsi07G006460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G006460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:6877369..6878565
RNA-Seq ExpressionLsi07G006460
SyntenyLsi07G006460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018241.1 hypothetical protein SDJN02_20109 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5783.1Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        M  TNCR     L SVTSLQ+KPLS++FMLKPAKFS+NRTLTLQIT S+ NN+VFEDRSNGVICYRD+DGEIICEGYDDEEPRIE+EIEKLPCE SRRRS
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        +GELK+DRLLLQQNWEK LE INGGAGSGRGELRIRANG SL
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

XP_022956325.1 uncharacterized protein LOC111458058 [Cucurbita moschata]4.1e-5883.8Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        M  TNCR     L SVTSLQ+KPLS++FMLKPAKFS+NRTLTLQIT S+ NN+VFEDRSNGVICYRD+DGEIICEGYDDEEPRIE+EIEKLPCE SRRRS
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        DGELK+DRLLLQQNWEK LE INGGAGSGRGELRIRANG SL
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

XP_022980749.1 uncharacterized protein LOC111480023 [Cucurbita maxima]1.4e-5883.8Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        M  TNCR     L S TSLQ+KPLS++FMLKPAKFS+NRTLTLQIT S+ NN+VFEDRSNGVICYRD+DGEIICEGYDDEEPRIEQEIEKLPCE SRRRS
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        DGELK+DRLLLQQNWEK LE INGGAGSGRGELRIRANG+SL
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

XP_023526222.1 uncharacterized protein LOC111789773 [Cucurbita pepo subsp. pepo]2.3e-5682.64Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        M  TNCR     L SVTSLQ+KPLS++FMLKPAKFS+NRT TLQIT S+ NN+VFEDRSNGVICYRD+DGEIICEGYDDEEPRIEQEIEKLPCE SRRRS
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGA--GSGRGELRIRANGYSL
        DGELK+DRLLLQQNWEK LE INGGA  GSGRGELRIRANG SL
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGA--GSGRGELRIRANGYSL

XP_038900432.1 uncharacterized protein LOC120087657 [Benincasa hispida]2.9e-5988.89Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFML-KPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMS-RR
        MAATNCR  LLP KS+TSLQ+KPLSK FML KPAK SVNRTLTLQITSSV NNLVFEDRSNGVICYRDEDGEIICEGYDDE+PRIEQEIEKLPCE S RR
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFML-KPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMS-RR

Query:  RSDGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        RSD E +MDRLLLQQNWEK+LEAINGGAGSGRGELRIRANGYSL
Subjt:  RSDGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LCR0 Uncharacterized protein1.8e-5178.87Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        MAATN R  LLPLKS TSLQ KPL  IFMLK  K SVNR L LQITSS+ NNLVFEDRSNGVICYRD+DGEIICEGYDDEE  IE+EIEKLPCE    R 
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        DGE+KMDRLLLQ  WEKQLE+INGGAGSGRGE+RI ANGY+L
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

A0A1S3CC94 uncharacterized protein LOC103499196 isoform X11.4e-5177.46Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        MAATN R  LLPLKS TSLQ+KPL+ +FMLKP K SVNRTLTLQITS + NNLVFEDRSNGVICYRD+DGEIICEGYDDEE  IE+E+EKLPCE S  R 
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        DGE+K DRLLLQ  WEKQLE+INGG GSGRGE+ I ANGY+L
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

A0A5D3D6I4 Uncharacterized protein1.4e-5177.46Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        MAATN R  LLPLKS TSLQ+KPL+ +FMLKP K SVNRTLTLQITS + NNLVFEDRSNGVICYRD+DGEIICEGYDDEE  IE+E+EKLPCE S  R 
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        DGE+K DRLLLQ  WEKQLE+INGG GSGRGE+ I ANGY+L
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

A0A6J1GXI0 uncharacterized protein LOC1114580582.0e-5883.8Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        M  TNCR     L SVTSLQ+KPLS++FMLKPAKFS+NRTLTLQIT S+ NN+VFEDRSNGVICYRD+DGEIICEGYDDEEPRIE+EIEKLPCE SRRRS
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        DGELK+DRLLLQQNWEK LE INGGAGSGRGELRIRANG SL
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

A0A6J1J044 uncharacterized protein LOC1114800236.9e-5983.8Show/hide
Query:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS
        M  TNCR     L S TSLQ+KPLS++FMLKPAKFS+NRTLTLQIT S+ NN+VFEDRSNGVICYRD+DGEIICEGYDDEEPRIEQEIEKLPCE SRRRS
Subjt:  MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRS

Query:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL
        DGELK+DRLLLQQNWEK LE INGGAGSGRGELRIRANG+SL
Subjt:  DGELKMDRLLLQQNWEKQLEAINGGAGSGRGELRIRANGYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14280.1 unknown protein6.7e-0639.24Show/hide
Query:  LLLPLKSVTSLQSKPLSKIFMLKPAKFSVN-RTLTLQITSSV---NNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPR
        L LPLK+   +     +K  ML+ ++  V  +  T+     +     N+VFED   G+ICY D++GE+ICEGY DE PR
Subjt:  LLLPLKSVTSLQSKPLSKIFMLKPAKFSVN-RTLTLQITSSV---NNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACAAATTGCAGATGTCTTCTTCTTCCCTTAAAATCTGTTACATCTCTTCAATCTAAACCTCTGAGCAAGATTTTTATGCTGAAACCTGCAAAATTTTCAGT
CAACAGAACTCTCACACTCCAAATTACATCTTCTGTGAACAACAACCTGGTTTTCGAGGATCGTTCTAATGGTGTGATTTGCTACAGAGATGAGGATGGAGAGATTATTT
GCGAAGGATATGATGATGAAGAGCCTCGTATTGAGCAAGAGATCGAGAAATTACCTTGTGAAATGTCTCGTCGAAGATCAGATGGCGAATTGAAGATGGATCGACTTCTA
TTACAGCAAAATTGGGAGAAGCAATTAGAAGCCATTAATGGCGGTGCGGGAAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTACAGTTTGTAG
mRNA sequenceShow/hide mRNA sequence
CTAGAATCAAATATGAAGCTTTTGAAAAAAAAATTGATATTCAATAACTCAATGTCATCTATTTTTCTTTTCTTATAGAAATCACATGTAGTGTAGTAAATATAGAAATG
ATATTTGTTTAAAATTAGAAAAATTGAAAAATGCTTTATAGTAGTAAAAGCCAAATGAAAAATTTGAGTAAATTAGGTTGTAGATTTGATTGAAGGCCCAATAGAATTGA
GTTACCCGCATGAGTATGGAAAAGTTTCAATGCCCAATTAGACAATTAATTAATTAAATTAATTATAGGGCTGAAGATAAGCAAATTGATTGTGACCCAAAAATTTTATA
ATCTGCAATATTTCAATGCTTTCTTCTTTGAAATCCATTGAAAGACGCTTTGGTTTTACGTAAAACATATTTTTAAAGCTCGAAGACCAGACTCTTTCAACATCTCCAAT
GGCAGCCACAAATTGCAGATGTCTTCTTCTTCCCTTAAAATCTGTTACATCTCTTCAATCTAAACCTCTGAGCAAGATTTTTATGCTGAAACCTGCAAAATTTTCAGTCA
ACAGAACTCTCACACTCCAAATTACATCTTCTGTGAACAACAACCTGGTTTTCGAGGATCGTTCTAATGGTGTGATTTGCTACAGAGATGAGGATGGAGAGATTATTTGC
GAAGGATATGATGATGAAGAGCCTCGTATTGAGCAAGAGATCGAGAAATTACCTTGTGAAATGTCTCGTCGAAGATCAGATGGCGAATTGAAGATGGATCGACTTCTATT
ACAGCAAAATTGGGAGAAGCAATTAGAAGCCATTAATGGCGGTGCGGGAAGTGGAAGAGGAGAGCTTCGAATTCGAGCGAATGGCTACAGTTTGTAGAAAATAATGGAAG
TTTGCAGGTAGAGTGAAAGAGAAAAGGGGGAAATTGCGGTTTCCTTGTGTTTCAAATTTGTATAATTTTACATATGCTTTACTTGATTTAGATTGTAAATTTAGCATACA
ATAAATTGTAAAATTGGTAAATTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MAATNCRCLLLPLKSVTSLQSKPLSKIFMLKPAKFSVNRTLTLQITSSVNNNLVFEDRSNGVICYRDEDGEIICEGYDDEEPRIEQEIEKLPCEMSRRRSDGELKMDRLL
LQQNWEKQLEAINGGAGSGRGELRIRANGYSL