; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G006510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G006510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description40S ribosomal protein SA
Genome locationchr07:6928059..6930231
RNA-Seq ExpressionLsi07G006510
SyntenyLsi07G006510
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144441.1 40S ribosomal protein SA isoform X1 [Cucumis sativus]4.3e-16997.1Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAA-VVAPPVSNVEWTQEP-VAIASDGWDAAVPPPAPSAE
        VDLFFYREPEEAKEKEEE+AVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPD+IPAP+AA VV PPVSNVEWTQEP VAIASDGWDAA PPPAPSAE
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAA-VVAPPVSNVEWTQEP-VAIASDGWDAAVPPPAPSAE

Query:  GGAPPAASWF
        GGA PAASWF
Subjt:  GGAPPAASWF

XP_008460336.2 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]2.7e-17197.08Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG
        VDLFFYREPEEAKEKEEE+AVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPD+IPAP+AAVV PPVSNVEWTQEPVA+ASDGWDAAVPPPAP+AEGG
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG

Query:  APPAASWF
        A PAASWF
Subjt:  APPAASWF

XP_022949415.1 40S ribosomal protein SA-like [Cucurbita moschata]2.4e-16493.81Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG
        VDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASDQWAGQISDAQWG PDV+P P AA V PPV +VEW QEPVA+ASDGWD AVPPPAPSAEG 
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG

Query:  APPAASW
        APPAASW
Subjt:  APPAASW

XP_031738662.1 40S ribosomal protein SA isoform X2 [Cucumis sativus]1.7e-17097.41Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAA-VVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEG
        VDLFFYREPEEAKEKEEE+AVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPD+IPAP+AA VV PPVSNVEWTQEPVAIASDGWDAA PPPAPSAEG
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAA-VVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEG

Query:  GAPPAASWF
        GA PAASWF
Subjt:  GAPPAASWF

XP_038903491.1 40S ribosomal protein SA-like [Benincasa hispida]4.6e-17196.75Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG
        VDLFFYREPEEAKEKEEE+AVAPPDYGIADYGGA LV+SDQWAGQISDAQWGAPDV+PAP+  V+APPV NVEWTQEPVA+ASDGWDAAVPPPAPSAEGG
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG

Query:  APPAASWF
        APPAASWF
Subjt:  APPAASWF

TrEMBL top hitse value%identityAlignment
A0A0A0L946 40S ribosomal protein SA2.1e-16997.1Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAA-VVAPPVSNVEWTQEP-VAIASDGWDAAVPPPAPSAE
        VDLFFYREPEEAKEKEEE+AVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPD+IPAP+AA VV PPVSNVEWTQEP VAIASDGWDAA PPPAPSAE
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAA-VVAPPVSNVEWTQEP-VAIASDGWDAAVPPPAPSAE

Query:  GGAPPAASWF
        GGA PAASWF
Subjt:  GGAPPAASWF

A0A1S3CDH5 40S ribosomal protein SA1.3e-17197.08Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG
        VDLFFYREPEEAKEKEEE+AVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPD+IPAP+AAVV PPVSNVEWTQEPVA+ASDGWDAAVPPPAP+AEGG
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG

Query:  APPAASWF
        A PAASWF
Subjt:  APPAASWF

A0A5D3D6J7 40S ribosomal protein SA5.0e-16393.83Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG
        VDLFFYREPEEAKEKEEE+AVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPD+IPAP+AAVV PPVSNVEWTQEP           VPPPAP+AEGG
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG

Query:  APPAASWF
        A PAASWF
Subjt:  APPAASWF

A0A6J1GCP6 40S ribosomal protein SA1.2e-16493.81Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG
        VDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASDQWAGQISDAQWG PDV+P P AA V PPV +VEW QEPVA+ASDGWD AVPPPAPSAEG 
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG

Query:  APPAASW
        APPAASW
Subjt:  APPAASW

A0A6J1K9M4 40S ribosomal protein SA1.3e-16393.16Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVM

Query:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG
        VDLFFYREPEEAKEKEEE AVAPPDYGIADYG APLVASDQWAGQISDAQWG PDV+P P AA V PPVS+VEW QEPVA+ASDGWD AVPPPAP  EG 
Subjt:  VDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGG

Query:  APPAASW
        APPAASW
Subjt:  APPAASW

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA6.5e-12876.45Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GH+WDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVDL

Query:  FFYREPEEAKEKEEEDAVAPPDYGIADYGGAPL--VASDQWAGQISDA-QWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPA---PSA
        FFYREPEE KE+E ++ VA PDYGI DY    L  +    W   I+DA QWGA     AP  AV      +       V IA+DGWDAA  PP    P  
Subjt:  FFYREPEEAKEKEEEDAVAPPDYGIADYGGAPL--VASDQWAGQISDA-QWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPA---PSA

Query:  EGGAPPAASW
          G PP A W
Subjt:  EGGAPPAASW

O22518 40S ribosomal protein SA3.2e-12779.25Show/hide
Query:  ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAI
        A A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAI
Subjt:  ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G +WDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMV

Query:  DLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEW--TQEPVAIASDGWDAAVPPP
        DLFFYREPEEAK++EEE+A A  DY I D+    + A  QW G I D  W   D +P P      P V  V W    E  A A   W  AVPPP
Subjt:  DLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEW--TQEPVAIASDGWDAAVPPP

O65751 40S ribosomal protein SA3.3e-12475.81Show/hide
Query:  MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MAT TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G +WDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDV

Query:  MVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPP--APSA
        MVDLFFYREPEEAK+  EED VA PDY IAD+  + + +  QW   I D  W   D +P P      P V  V W   P A+A D W  AVPPP   P+A
Subjt:  MVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPP--APSA

Query:  EGGAPPAASW
           + PA  W
Subjt:  EGGAPPAASW

O80377 40S ribosomal protein SA8.0e-12678.07Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GH+W+VMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVDL

Query:  FFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGGAPP
        FFYREPEE K++EEED +   DY +ADY  AP+  +DQW   I DAQWG   V PA  A      V    WT +   IA DGWDAA  PP P A G   P
Subjt:  FFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGGAPP

Query:  A
        A
Subjt:  A

Q08682 40S ribosomal protein Sa-18.0e-11870Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG +WD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWD

Query:  VMVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSA
        VMVDLFFYREPEE K ++E++A    +YG        +V  DQW   QI DA W      P    A ++   +   W+    A A  GW+AA PP     
Subjt:  VMVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSA

Query:  EGGAPPAASW
             PAA W
Subjt:  EGGAPPAASW

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA5.7e-11970Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG +WD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWD

Query:  VMVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSA
        VMVDLFFYREPEE K ++E++A    +YG        +V  DQW   QI DA W      P    A ++   +   W+    A A  GW+AA PP     
Subjt:  VMVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSA

Query:  EGGAPPAASW
             PAA W
Subjt:  EGGAPPAASW

AT1G72370.2 40s ribosomal protein SA1.8e-11769.68Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG +WD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWD

Query:  VMVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSA
        VMVDLFFYREPEE K ++E++A    +YG        +V  DQW   QI DA W      P    A ++   +   W+      A  GW+AA PP     
Subjt:  VMVDLFFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSA

Query:  EGGAPPAASW
             PAA W
Subjt:  EGGAPPAASW

AT3G04770.1 40s ribosomal protein SA B1.4e-10187.44Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  +WDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVD

AT3G04770.2 40s ribosomal protein SA B7.7e-11673.33Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  +WDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVDL

Query:  FFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWD
        FFYREPEEAK++ +E+A    DYG        +V  DQW   QISDA W      P   A  V   V+   W  E  ++ + GW+
Subjt:  FFYREPEEAKEKEEEDAVAPPDYGIADYGGAPLVASDQW-AGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCAACAGCACCACGTCAACTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAGAACTGTGACTTCCAAATGGA
GCGTTACGTTTTCAAGCGCCGCAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAGCTTCAGCTGGCTGCCAGAGTCATTGTTGGAATTGAGAATCCAC
AAGACATCATTGTTCAGTCTGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAACACACTGGTGCACATGCTATAGCCGGGAGGCACACCCCTGGAACCTTC
ACTAACCAGCTTCAGACCTCATTCAATGAGCCGCGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCTACAAT
TGCCTTTTGTGACACTGATTCACCAATGCGTTATGTTGACATTGGGATCCCTGCAAATAACAAGGGTAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCAAGGATGG
TTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATGAATGGGACGTGATGGTGGACTTGTTTTTCTACCGGGAGCCTGAGGAGGCTAAGGAGAAAGAAGAAGAAGATGCT
GTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCGCTTGTTGCCTCAGATCAATGGGCTGGGCAAATTTCTGATGCCCAGTGGGGTGCTCCTGATGTGAT
TCCAGCACCAGAGGCTGCTGTAGTTGCTCCACCTGTTTCGAATGTTGAGTGGACCCAAGAGCCAGTTGCTATAGCATCAGACGGATGGGATGCTGCAGTACCACCACCAG
CACCTTCAGCTGAAGGTGGCGCCCCTCCAGCTGCTAGTTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGCAACAGCACCACGTCAACTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAGAACTGTGACTTCCAAATGGA
GCGTTACGTTTTCAAGCGCCGCAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAGCTTCAGCTGGCTGCCAGAGTCATTGTTGGAATTGAGAATCCAC
AAGACATCATTGTTCAGTCTGCAAGACCTTATGGTCAGAGGGCTGTCTTAAAGTTTGCTCAACACACTGGTGCACATGCTATAGCCGGGAGGCACACCCCTGGAACCTTC
ACTAACCAGCTTCAGACCTCATTCAATGAGCCGCGTCTTCTGATACTGACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCTACAAT
TGCCTTTTGTGACACTGATTCACCAATGCGTTATGTTGACATTGGGATCCCTGCAAATAACAAGGGTAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCAAGGATGG
TTCTGCAGATGCGTGGAACTATTCGTGCAGGGCATGAATGGGACGTGATGGTGGACTTGTTTTTCTACCGGGAGCCTGAGGAGGCTAAGGAGAAAGAAGAAGAAGATGCT
GTTGCACCCCCAGATTATGGCATTGCAGATTATGGTGGTGCTCCGCTTGTTGCCTCAGATCAATGGGCTGGGCAAATTTCTGATGCCCAGTGGGGTGCTCCTGATGTGAT
TCCAGCACCAGAGGCTGCTGTAGTTGCTCCACCTGTTTCGAATGTTGAGTGGACCCAAGAGCCAGTTGCTATAGCATCAGACGGATGGGATGCTGCAGTACCACCACCAG
CACCTTCAGCTGAAGGTGGCGCCCCTCCAGCTGCTAGTTGGTTTTAA
Protein sequenceShow/hide protein sequence
MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHEWDVMVDLFFYREPEEAKEKEEEDA
VAPPDYGIADYGGAPLVASDQWAGQISDAQWGAPDVIPAPEAAVVAPPVSNVEWTQEPVAIASDGWDAAVPPPAPSAEGGAPPAASWF