; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G006670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G006670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:7159675..7160049
RNA-Seq ExpressionLsi07G006670
SyntenyLsi07G006670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581768.1 hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4380.49Show/hide
Query:  MAQSNEQEEGQSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLE
        M Q  E EEGQ GAGLR G RRG++FRRRRMPVARLGGKRSGR+VAWGRMLRK+RLRWVKLKCIAMVKK+K+YYTRLMKDI+E GAY +  SYQHR+LLE
Subjt:  MAQSNEQEEGQSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLE

Query:  TSFAIPILGVSLSTPSSILATTT
        TSFAIPILGVSLST SS+LA T+
Subjt:  TSFAIPILGVSLSTPSSILATTT

KAG7018218.1 hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4079.67Show/hide
Query:  MAQSNEQEEGQSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLE
        M Q  E EEGQ GAGLR GMR    FRRRRMPVARLGGKRSGR+VAWGRMLRK+RLRWVKLKCIAMVKK+K+YYTRLMKDI+E GAY +  SYQHR+LLE
Subjt:  MAQSNEQEEGQSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLE

Query:  TSFAIPILGVSLSTPSSILATTT
        TSFAIPILGVSLST SS+LA T+
Subjt:  TSFAIPILGVSLSTPSSILATTT

XP_022948735.1 uncharacterized protein LOC111452314 [Cucurbita moschata]1.1e-3878.05Show/hide
Query:  MAQSNEQEEG-QSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLL
        M QS+EQEEG Q+GAGLR   R+GIQFRRRRM VARLGGKRSGR+VAWGR LRK+RLRWVKLKCIAMVKK+KKY   LMKD+ME GAYG  DSYQHRLLL
Subjt:  MAQSNEQEEG-QSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLL

Query:  ETSFAIPILGVSLSTPSSILATT
        ETSFAIPILGVS ST S+  A +
Subjt:  ETSFAIPILGVSLSTPSSILATT

XP_022956317.1 uncharacterized protein LOC111458050 [Cucurbita moschata]3.1e-4178.74Show/hide
Query:  MAQSNEQEEGQSGAGL----RSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHR
        M Q  E EEGQ GAGL    R G RRG++FRRRRMPVARLGGKRSGR+VAWGRMLRK+RLRWVKLKCIAMVKK+K+YYTRLMKDI+E GAY    SYQHR
Subjt:  MAQSNEQEEGQSGAGL----RSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHR

Query:  LLLETSFAIPILGVSLSTPSSILATTT
        LLLETSFAIPILGVSLST SS+LA T+
Subjt:  LLLETSFAIPILGVSLSTPSSILATTT

XP_038891072.1 uncharacterized protein LOC120080455 [Benincasa hispida]1.5e-4889.52Show/hide
Query:  MAQSNEQEEGQSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGY-PDSYQHRLLL
        MAQS EQ EGQ  AGLR GMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRK+RLRWVK+KCIAMVKKIKKYYT LMKDIMEGGAYGY  DSYQHRLL+
Subjt:  MAQSNEQEEGQSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGY-PDSYQHRLLL

Query:  ETSFAIPILGVSLSTPSSILATTT
        ETSFAIPILGVSLST SSILATT+
Subjt:  ETSFAIPILGVSLSTPSSILATTT

TrEMBL top hitse value%identityAlignment
A0A0A0LBW7 Uncharacterized protein2.7e-3580.95Show/hide
Query:  RRGIQF-RRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLETSFAIPILGVSLSTPSSIL
        R GIQF RRRRM VARLGGKRSGRIV WGR++RK+RL+WVK+KCI MVKK+KKYY  LMKDIME GAYGY DSYQHRLLLETSFAIPILGVSLST SSI 
Subjt:  RRGIQF-RRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLETSFAIPILGVSLSTPSSIL

Query:  ATTTS
        A T +
Subjt:  ATTTS

A0A5D3DCV1 Uncharacterized protein7.1e-3683Show/hide
Query:  RRGIQFRRRR-MPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLETSFAIPILGVSLSTPSSIL
        R GIQFRRRR M VARLGGKRSGRI+AWGR++RK+RL+WVK+KCI MVKK+KKYY +LMKDIME GAYGY DSYQHRLLLETSFAIPILGVSLST SSI+
Subjt:  RRGIQFRRRR-MPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLETSFAIPILGVSLSTPSSIL

A0A6J1D3L4 uncharacterized protein LOC1110169631.9e-2562.93Show/hide
Query:  AQSNEQEEGQSGAGLRSGMRRGIQF-RRRRMPVARLGGKRSGRIVA-WGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEG-GAYGYPDSYQHRLL
        +Q  E  E ++G GLR   RRGIQF RRRRMPVARLGG  SG      GRM+RK+R+RWVKL+C+AMVKK+KK+Y +++KD++E   A  YP+SYQHR+L
Subjt:  AQSNEQEEGQSGAGLRSGMRRGIQF-RRRRMPVARLGGKRSGRIVA-WGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEG-GAYGYPDSYQHRLL

Query:  LETSFAIPILGVSLST
        LETSFAIPIL  SLST
Subjt:  LETSFAIPILGVSLST

A0A6J1GAR0 uncharacterized protein LOC1114523145.3e-3978.05Show/hide
Query:  MAQSNEQEEG-QSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLL
        M QS+EQEEG Q+GAGLR   R+GIQFRRRRM VARLGGKRSGR+VAWGR LRK+RLRWVKLKCIAMVKK+KKY   LMKD+ME GAYG  DSYQHRLLL
Subjt:  MAQSNEQEEG-QSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLL

Query:  ETSFAIPILGVSLSTPSSILATT
        ETSFAIPILGVS ST S+  A +
Subjt:  ETSFAIPILGVSLSTPSSILATT

A0A6J1GVZ8 uncharacterized protein LOC1114580501.5e-4178.74Show/hide
Query:  MAQSNEQEEGQSGAGL----RSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHR
        M Q  E EEGQ GAGL    R G RRG++FRRRRMPVARLGGKRSGR+VAWGRMLRK+RLRWVKLKCIAMVKK+K+YYTRLMKDI+E GAY    SYQHR
Subjt:  MAQSNEQEEGQSGAGL----RSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHR

Query:  LLLETSFAIPILGVSLSTPSSILATTT
        LLLETSFAIPILGVSLST SS+LA T+
Subjt:  LLLETSFAIPILGVSLSTPSSILATTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54120.1 unknown protein6.0e-1142.72Show/hide
Query:  SGMRRGIQFRRRRMPVARLGGKRSGRIVAWG-----RMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLE-TSFAIPILGVS
        S  RR I  RRR+  V RLGGK S   V+ G     +M+R+M+LRW+KL  + +VKKIK +Y  L+K+ ++ GA    ++ Q R+ +E  +FA+P LG+S
Subjt:  SGMRRGIQFRRRRMPVARLGGKRSGRIVAWG-----RMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLE-TSFAIPILGVS

Query:  LST
         S+
Subjt:  LST

AT3G14060.1 unknown protein7.3e-0941.49Show/hide
Query:  RRGIQFRRRRMPVARLGGKRSGRIVAWG--RMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLET-SFAIPILGVS
        RR I  RRR+  V RLGGK S    ++   +++ +MRL+W++L  + +VKKIK YY  ++K+  E GA     + Q R+ +ET +FA P LG+S
Subjt:  RRGIQFRRRRMPVARLGGKRSGRIVAWG--RMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLET-SFAIPILGVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCAAAGCAATGAGCAGGAAGAAGGGCAGTCAGGGGCGGGACTGCGGTCGGGGATGCGTCGGGGGATTCAGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTCGG
GGGGAAGAGATCGGGGCGGATCGTGGCGTGGGGGAGGATGCTGAGGAAGATGAGACTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACT
ATACAAGGTTGATGAAGGATATAATGGAAGGAGGAGCATATGGCTATCCTGATTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATTTTGGGTGTC
TCTCTCTCTACTCCTTCAAGTATTCTTGCTACTACAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCAAAGCAATGAGCAGGAAGAAGGGCAGTCAGGGGCGGGACTGCGGTCGGGGATGCGTCGGGGGATTCAGTTTCGGAGGCGACGAATGCCAGTGGCACGGCTCGG
GGGGAAGAGATCGGGGCGGATCGTGGCGTGGGGGAGGATGCTGAGGAAGATGAGACTAAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACT
ATACAAGGTTGATGAAGGATATAATGGAAGGAGGAGCATATGGCTATCCTGATTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATTTTGGGTGTC
TCTCTCTCTACTCCTTCAAGTATTCTTGCTACTACAACTTCATGA
Protein sequenceShow/hide protein sequence
MAQSNEQEEGQSGAGLRSGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKMRLRWVKLKCIAMVKKIKKYYTRLMKDIMEGGAYGYPDSYQHRLLLETSFAIPILGV
SLSTPSSILATTTS