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Lsi07G006830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G006830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionribosomal protein-related
Genome locationchr07:7348233..7348685
RNA-Seq ExpressionLsi07G006830
SyntenyLsi07G006830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148109.1 uncharacterized protein LOC111016865 [Momordica charantia]4.6e-6084Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
        MGE  SP  P SLPQ NSTATPM+SSGT+RRK P+PQEL+SHYESQGL SHDASIKVIEDLQNALFRI+SSGRGKKDKLLVETS+KIDAT +R+AILDLK
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        LDSKPGYAETFA+GLASGSVL G+G+VMPHVFGA  NIWSSVSN TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
XP_022955496.1 uncharacterized protein LOC111457504 [Cucurbita moschata]7.2e-6185.43Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSS-GTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        M +S+SPA   SLPQDN+TATPM SS G +RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILDL
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSS-GTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        KLDSKPGYA+TFALGLASGSVLNGIG VMPHVFGA  NIWSSVS  TKHSS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
XP_022980748.1 uncharacterized protein LOC111480022 [Cucurbita maxima]2.9e-6286Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
        M +S+SPA   SLPQDN+TATPM SSG +RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILDLK
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        LDSKPGYA+TFALGLASGSVLNGIG VMPHVFGA  NIWSSVS  TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
XP_023527033.1 uncharacterized protein LOC111790380 [Cucurbita pepo subsp. pepo]7.9e-6084.77Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSS-GTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        M +S+SPA   SL QDN+TATPM SS G +RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILDL
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSS-GTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        KLDSKPGYA+TFALGLASGSVLNGIG VMPHVFGA  NIWSSVS  TKHSS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
XP_038893730.1 uncharacterized protein LOC120082569 [Benincasa hispida]3.4e-7196Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
        MGESHS APP SLPQDNSTA PMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        LDSKPGYAE+FALGLASGSVL+GIGTVMPHVFGA TNIWSSVSNLTKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
TrEMBL top hitse value%identityAlignment
A0A1S4DV46 uncharacterized protein LOC1034875375.5e-5983.22Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
        M +S SPAPP SLPQ     +P   S   RRKPPSPQELISHYESQG TSHDASIKVI+DLQNALF+IISSGRGKKDKLL+ETSRKIDATN+RLA+LDLK
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHS
        LDSKPGYAETFALGLASGSVLNG+GTVMPHVFGA TNIWSSV+NLTKHS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHS
A0A5A7VAF7 Putative ribosomal-like protein5.5e-5983.22Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
        M +S SPAPP SLPQ     +P   S   RRKPPSPQELISHYESQG TSHDASIKVI+DLQNALF+IISSGRGKKDKLL+ETSRKIDATN+RLA+LDLK
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHS
        LDSKPGYAETFALGLASGSVLNG+GTVMPHVFGA TNIWSSV+NLTKHS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHS
A0A6J1D308 uncharacterized protein LOC1110168652.2e-6084Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
        MGE  SP  P SLPQ NSTATPM+SSGT+RRK P+PQEL+SHYESQGL SHDASIKVIEDLQNALFRI+SSGRGKKDKLLVETS+KIDAT +R+AILDLK
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        LDSKPGYAETFA+GLASGSVL G+G+VMPHVFGA  NIWSSVSN TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
A0A6J1GTX5 uncharacterized protein LOC1114575043.5e-6185.43Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSS-GTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL
        M +S+SPA   SLPQDN+TATPM SS G +RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILDL
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSS-GTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        KLDSKPGYA+TFALGLASGSVLNGIG VMPHVFGA  NIWSSVS  TKHSS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
A0A6J1J075 uncharacterized protein LOC1114800221.4e-6286Show/hide
Query:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK
        M +S+SPA   SLPQDN+TATPM SSG +RRK PSPQEL+SHYESQGLTSHDASIKVIEDLQNAL RIISSGRGKKDKLLV+TSRKIDATN RLAILDLK
Subjt:  MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        LDSKPGYA+TFALGLASGSVLNGIG VMPHVFGA  NIWSSVS  TKHSS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16790.1 ribosomal protein-related3.7e-3154.41Show/hide
Query:  NSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGR--GKKDKLLVETSRKIDATNNRLAILDLKLDSKPGYAETFALG
        N+     +    + +K P+P ELISHY+ +GL   +ASIKVIEDLQNAL R++SS R    KDKL+ + +RKIDA N RLA++D KL++KPGY ETFALG
Subjt:  NSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGR--GKKDKLLVETSRKIDATNNRLAILDLKLDSKPGYAETFALG

Query:  LASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS
        LASG+ LNGI  V PHV      IWS+V   T  SS
Subjt:  LASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAATCACATTCACCAGCGCCTCCATATTCTCTCCCCCAAGACAACAGTACAGCGACCCCCATGACGTCTTCAGGAACCCGAAGAAGAAAGCCTCCTTCCCCACA
GGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATAGAAGACCTTCAGAATGCTCTCTTTAGGATCATCTCCTCCGGCAGAG
GCAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATGCTACCAATAATCGTCTTGCAATTCTCGACCTAAAGTTGGATTCCAAGCCGGGCTATGCCGAGACT
TTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGACTGTGATGCCCCATGTTTTTGGGGCTTTCACCAATATTTGGAGCTCTGTTAGTAATCTTACCAA
GCATTCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAATCACATTCACCAGCGCCTCCATATTCTCTCCCCCAAGACAACAGTACAGCGACCCCCATGACGTCTTCAGGAACCCGAAGAAGAAAGCCTCCTTCCCCACA
GGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATAGAAGACCTTCAGAATGCTCTCTTTAGGATCATCTCCTCCGGCAGAG
GCAAAAAGGACAAGCTTCTGGTCGAGACCTCAAGGAAGATCGATGCTACCAATAATCGTCTTGCAATTCTCGACCTAAAGTTGGATTCCAAGCCGGGCTATGCCGAGACT
TTTGCCCTAGGCTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGACTGTGATGCCCCATGTTTTTGGGGCTTTCACCAATATTTGGAGCTCTGTTAGTAATCTTACCAA
GCATTCTTCTTGA
Protein sequenceShow/hide protein sequence
MGESHSPAPPYSLPQDNSTATPMTSSGTRRRKPPSPQELISHYESQGLTSHDASIKVIEDLQNALFRIISSGRGKKDKLLVETSRKIDATNNRLAILDLKLDSKPGYAET
FALGLASGSVLNGIGTVMPHVFGAFTNIWSSVSNLTKHSS