; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G007090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G007090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationchr07:7604078..7609638
RNA-Seq ExpressionLsi07G007090
SyntenyLsi07G007090
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149752.1 protein SEH1 [Cucumis sativus]8.8e-17392.02Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGT+CSAWNYS+ RLAT S+DGTLVIFDSP PSSSSTS T TSNFKAHE AI K VWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN
        LCK FKSNSSQILD+QFGNSSSGLKMIAAFSDG+IKVYELMDPL+LK+WQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFV AFSSNTPQLN
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTA+KGDEVYAVAWAQNIGR YEVIAVATQ+GIAIW LGLSPD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_008451932.1 PREDICTED: protein SEH1 [Cucumis melo]5.4e-17894.48Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWN+S++RLAT S+DGTLVIFDSP PSSSSTSLTRTSNFKAHEAAI K VWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN
        LCK FKSNSSQILD+QFGNSSSGLKMIAAFSDG+IKVYELMDPLDLKSWQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFV AFSSNTPQLN
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTA+KGDEVYAVAWAQNIGR YEVIAVATQ+GIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022136602.1 protein SEH1 [Momordica charantia]9.8e-17292.05Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSA+RLAT S DGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAI+K VWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL
        LCKRFKSNS+Q+LDIQFGNSSSGLKMIAAFS  H+KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKASC SASISWNPHRGE QQSSFV A +SNTPQL
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQNIGR YEVIAVATQKGIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022942103.1 protein SEH1 [Cucurbita moschata]2.8e-17191.74Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLTRTSNFKAHEAAI K VWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL
        L K FKSNSSQI+DIQFGNSSSGLKMIAAFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+C SASISWNP+RGE QQSSFV AF S+TPQL
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGR YEVIAVATQKGIAIWRLGL+PD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_038897768.1 protein SEH1 [Benincasa hispida]5.7e-18096.01Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGT+CSAWNYSANRLATGSADGTL+IFDSPDPSSSSTSLTRTSNFK HEAAIIK VWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN
        LCK FK NSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA CSSASISWNPHRGEQQ SFV AFSSNTPQLN
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGR YEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHA FEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein4.3e-17392.02Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGT+CSAWNYS+ RLAT S+DGTLVIFDSP PSSSSTS T TSNFKAHE AI K VWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN
        LCK FKSNSSQILD+QFGNSSSGLKMIAAFSDG+IKVYELMDPL+LK+WQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFV AFSSNTPQLN
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTA+KGDEVYAVAWAQNIGR YEVIAVATQ+GIAIW LGLSPD DGRLS ERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH12.6e-17894.48Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWN+S++RLAT S+DGTLVIFDSP PSSSSTSLTRTSNFKAHEAAI K VWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN
        LCK FKSNSSQILD+QFGNSSSGLKMIAAFSDG+IKVYELMDPLDLKSWQLQAEFQNVIDSISTVRK+SCSSASISWNPHRGEQQSSFV AFSSNTPQLN
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLN

Query:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
        SAKVWEFDQAHQRWLPVAELALTA+KGDEVYAVAWAQNIGR YEVIAVATQ+GIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG
Subjt:  SAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH14.7e-17292.05Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSA+RLAT S DGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAI+K VWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL
        LCKRFKSNS+Q+LDIQFGNSSSGLKMIAAFS  H+KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKASC SASISWNPHRGE QQSSFV A +SNTPQL
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQNIGR YEVIAVATQKGIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH11.4e-17191.74Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSA+RL TGSADGT+VIFDS DPSSSSTSLTRTSNFKAHEAAI K VWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL
        L K FKSNSSQI+DIQFGNSSSGLKMIAAFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+C SASISWNP+RGE QQSSFV AF S+TPQL
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGR YEVIAVATQKGIAIWRLGL+PD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1J2X1 protein SEH11.2e-17091.13Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSA+RL TGSADGT+V+FDS DPSSSSTSLTRTSNFKAHEAAI K VWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL
        L K FKSNSSQILDIQFGNSSSGLKMIAAFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+C SASISWNP+RGE QQSSFV AF S+TPQL
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGE-QQSSFVSAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPVAELAL ADKGD VYAVAWAQNIGR YEVIAVATQKGIAIWRLGL+PD+DGRLSTERVALLSGHN EVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
A7YY75 Nucleoporin SEH11.1e-3229.07Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D     S S     T+++K H  ++ +  W  PE+G  +A    D T+++WEE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLNSAKVWEFD-Q
         + D++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      +  ++  S ++     AKV  F+  
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLNSAKVWEFD-Q

Query:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG
         + R    AE  LT    D V+ +A+A N+GRS+ ++A+AT K + I+ L        S     +     VA    HN +VW + W++ G  LAS+G DG
Subjt:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG

Query:  MVRLWQSNLNGVW
         VRLW++N    W
Subjt:  MVRLWQSNLNGVW

C1BK83 Nucleoporin SEH11.2e-3428.75Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQ-----WKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D  D    +     T+++K H  ++ +  W  PE+G  +A    D T+++WEE+V ++   Q     W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQ-----WKLCKRFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFS--SNTPQLNSAKVWEFD
         + D++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  ++  S  SNT      +++E+ 
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFS--SNTPQLNSAKVWEFD

Query:  QAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRL-----GLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG
        +  +++  V  L       D V+ +A+A N+GRS+ V+A+AT K + I++L       S     +L  +  A   GHN +VW + W++    LAS+G DG
Subjt:  QAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRL-----GLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG

Query:  MVRLWQSNLNGVW
         VRLW++N    W
Subjt:  MVRLWQSNLNGVW

Q5RAN6 Nucleoporin SEH11.1e-3229.07Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D     S S     T+++K H  ++ +  W  PE+G  +A    D T+++WEE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLNSAKVWEFD-Q
         + D++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  ++  S ++     AKV  F+  
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLNSAKVWEFD-Q

Query:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG
         + R    AE  +T    D V+ +A+A N+GRS+ ++A+AT K + I+ L        S     +     VA    HN +VW + W++ G  LAS+G DG
Subjt:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG

Query:  MVRLWQSNLNGVW
         VRLW++N    W
Subjt:  MVRLWQSNLNGVW

Q93VR9 Protein SEH11.8e-12363.08Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S +RLA GS +G L I++S   +SSS++ + TS  +  E++I+K VW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVSAFSSNTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFV AF+S++P L
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVSAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGR YEV+AVAT KGI IW +GL+PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP

Q96EE3 Nucleoporin SEH18.4e-3329.07Show/hide
Query:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R+AT S+D ++ ++D     S S     T+++K H  ++ +  W  PE+G  +A    D T+++WEE+V ++         W        + +
Subjt:  AWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLNSAKVWEFD-Q
         + D++F     GL +    +DG +++YE  D ++L  W LQ E            K SCS   ISWNP      S  ++  S ++     AKV  F+  
Subjt:  QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLNSAKVWEFD-Q

Query:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG
         + R    AE  +T    D V+ +A+A N+GRS+ ++A+AT K + I+ L        S     +     VA    HN +VW + W++ G  LAS+G DG
Subjt:  AHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLG------LSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG

Query:  MVRLWQSNLNGVW
         VRLW++N    W
Subjt:  MVRLWQSNLNGVW

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein1.2e-12463.08Show/hide
Query:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S +RLA GS +G L I++S   +SSS++ + TS  +  E++I+K VW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVSAFSSNTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFV AF+S++P L
Subjt:  LCKRFKSNSSQILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQS-SFVSAFSSNTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGR YEV+AVAT KGI IW +GL+PD +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCTATGGCGACCTTCGACAAAGGTACGGTCTGTTCAGCTTGGAACTACTCCGCCAACAGATTAGCCACCGGTTCTGCCGACGGAACCCTCGTCATCTTCGA
TTCTCCCGACCCTTCTTCCTCCTCCACCTCCTTAACTCGCACATCAAACTTCAAGGCACACGAGGCTGCAATTATTAAGACTGTTTGGGTCCCTCCGGAGTATGGTGATT
CCGTTGCATGCATTTGTTCAGATGGAACTTCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTTAAAAGTAATTCATCT
CAAATCCTAGACATCCAATTTGGAAATTCCTCCTCCGGTCTGAAAATGATTGCTGCATTTTCAGACGGTCATATAAAGGTTTACGAGCTTATGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACAGTCAGGAAAGCTTCTTGTTCATCTGCAAGTATATCTTGGAATCCACATCGAGGGGAAC
AGCAATCAAGCTTTGTTTCGGCTTTTAGTTCGAATACACCACAGCTTAATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTG
GCTTTGACTGCAGACAAAGGTGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGTCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATG
GCGCCTTGGATTAAGCCCGGACACGGATGGAAGACTGTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTA
TGACATTAGCATCAACAGGAAAGGACGGGATGGTACGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATAACTTAGCCCCCCAAAAATAAATAAAACACAGTTACGACGCCACAAAACCCCGAAGTAAGAGGAAGAGGGTGAAGCAAGATTTTGTAGCAGGCGAAGGCGCGAACTAG
AAATTGAGGGTTGAGATGGAGAAGGCTATGGCGACCTTCGACAAAGGTACGGTCTGTTCAGCTTGGAACTACTCCGCCAACAGATTAGCCACCGGTTCTGCCGACGGAAC
CCTCGTCATCTTCGATTCTCCCGACCCTTCTTCCTCCTCCACCTCCTTAACTCGCACATCAAACTTCAAGGCACACGAGGCTGCAATTATTAAGACTGTTTGGGTCCCTC
CGGAGTATGGTGATTCCGTTGCATGCATTTGTTCAGATGGAACTTCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTT
AAAAGTAATTCATCTCAAATCCTAGACATCCAATTTGGAAATTCCTCCTCCGGTCTGAAAATGATTGCTGCATTTTCAGACGGTCATATAAAGGTTTACGAGCTTATGGA
TCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACAGTCAGGAAAGCTTCTTGTTCATCTGCAAGTATATCTTGGAATC
CACATCGAGGGGAACAGCAATCAAGCTTTGTTTCGGCTTTTAGTTCGAATACACCACAGCTTAATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTT
CCTGTTGCAGAGTTGGCTTTGACTGCAGACAAAGGTGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGTCATATGAGGTAATAGCTGTTGCAACCCAGAA
AGGAATTGCAATATGGCGCCTTGGATTAAGCCCGGACACGGATGGAAGACTGTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAGATGGAGT
GGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGACGGGATGGTACGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACT
TCTTAAACTTGAGAACGTTTTTGTTTCTTTATGATGTAACCACTTCCTGTATTCACTATAAGGAAGAACTCCGAAATAATATTATTTGTCTTGCTGAGTGGGGTGCTAAT
GTCAGGGATACCTTGTTGGAGACCCTTCGAGAAAATCAATTGTCATTGATGCTTTTATTTCTCCAAATTGCTTTTACTGAGTTGAGACTAATGTTGCTCAAAGTATGAAG
TTCACGCAGACAAGAAGAAAGAATAAAACTTCACGTGAATTAGAGATTGAGAAGGAAAATAATGAGTGTATGAGTTTAAAACCAAGGACAATGTAGTATTTCTATCCACT
TTGATAACAGTTCATAAGAAACACTTGAAAGTAAATTTTAGAAATTTAACTTTGAAAGTGGTTTAATAATAGCTGACAGCTCAAAGAAACTTCCACTTTAAA
Protein sequenceShow/hide protein sequence
MEKAMATFDKGTVCSAWNYSANRLATGSADGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAIIKTVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSS
QILDIQFGNSSSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCSSASISWNPHRGEQQSSFVSAFSSNTPQLNSAKVWEFDQAHQRWLPVAEL
ALTADKGDEVYAVAWAQNIGRSYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS