; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G007200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G007200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:7789173..7789586
RNA-Seq ExpressionLsi07G007200
SyntenyLsi07G007200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577140.1 hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sororia]6.0e-4684.89Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL--QQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTKQ
        MI NLISSLNKKLQAVEISNRCRRTKK  TT VYR D+SKKKQ P L  Q +PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQ
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL--QQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTKQ

Query:  EANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
        EANRMLSRCSDGGVLEF DVA ELMRIPA RVSSSMV N
Subjt:  EANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN

KAG6600516.1 hypothetical protein SDJN03_05749, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4985.71Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKK--KTTTYVYRDDLSKKKQSPSLQQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKK-VVRITVKLTK
        MISNLISSLNKKLQAVEISNRCRRTKK   TTTYVYRDDL+KKKQSPS QQQPEIKKVKKRVRFA+TEPVIIAI       AEEETEKK VVRITVK+TK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKK--KTTTYVYRDDLSKKKQSPSLQQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKK-VVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
        QEANRMLSRCS+GGVLE GD ACELMRIPA RV SSMVAN
Subjt:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN

XP_008451951.1 PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo]2.0e-4683.33Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL-----QQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV
        MISNLISSLNKKLQAVEISNRC+RTKK  TTYVYRDDL+KKK SP L     Q QP EIKKVKKRVRFADTEPVIIAI TD EE   EEETEKKVVRITV
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL-----QQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV

Query:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
        KLTKQEANRMLSRCS+ GVLEFGDVA EL+RIP TRVSSS+VAN
Subjt:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN

XP_022985430.1 uncharacterized protein LOC111483436 [Cucurbita maxima]6.0e-4686.13Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKK--QSPSLQQ-QPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTK
        MI NLISSLNKKLQAVEISNRCRRTKK  TT VYR D+SKKK  QSPS  Q +PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKK--QSPSLQQ-QPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSM
        QEANRMLSRCSDGGVLEFGDVA ELMRIPA RVSSSM
Subjt:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSM

XP_038906331.1 uncharacterized protein LOC120092170 [Benincasa hispida]1.6e-5490.71Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSP---SLQQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTK
        MISN I SLNKKLQAVEISNRCRRTKK  TTYVYRDDLSKKKQSP   S Q QPEIKKVKKRVRFADTEPVIIAITD EER  EEETEKKVVRITVKLTK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSP---SLQQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
        +EANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
Subjt:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein7.1e-4580.56Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSP-----SLQQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV
        MISNLISSLNKKLQAVEIS+RC+RTKK  T YVYRD+L+KK  SP     S Q QP EIKKVKKRVRFADTEPVIIAI TD EE   E ETEKKVVRITV
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSP-----SLQQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV

Query:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
        KLTKQEANRMLSRCS+GGVLEFGDVA ELMRIP TRV SS+VAN
Subjt:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN

A0A1S3BS40 uncharacterized protein LOC1034930989.9e-4783.33Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL-----QQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV
        MISNLISSLNKKLQAVEISNRC+RTKK  TTYVYRDDL+KKK SP L     Q QP EIKKVKKRVRFADTEPVIIAI TD EE   EEETEKKVVRITV
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL-----QQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV

Query:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
        KLTKQEANRMLSRCS+ GVLEFGDVA EL+RIP TRVSSS+VAN
Subjt:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN

A0A5D3D246 Uncharacterized protein9.9e-4783.33Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL-----QQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV
        MISNLISSLNKKLQAVEISNRC+RTKK  TTYVYRDDL+KKK SP L     Q QP EIKKVKKRVRFADTEPVIIAI TD EE   EEETEKKVVRITV
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL-----QQQP-EIKKVKKRVRFADTEPVIIAI-TDTEERIAEEETEKKVVRITV

Query:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN
        KLTKQEANRMLSRCS+ GVLEFGDVA EL+RIP TRVSSS+VAN
Subjt:  KLTKQEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSMVAN

A0A6J1EU86 uncharacterized protein LOC1114376084.9e-4686.03Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL--QQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTKQ
        MI NLISSLNKKLQAVEISNRCRRTKK  TT VYR D+SKKKQ P L  Q +PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTKQ
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSL--QQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTKQ

Query:  EANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSM
        EANRMLSRCSDGGVLEFGDVA ELMRIPA RVSSSM
Subjt:  EANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSM

A0A6J1JBA8 uncharacterized protein LOC1114834362.9e-4686.13Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKK--QSPSLQQ-QPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTK
        MI NLISSLNKKLQAVEISNRCRRTKK  TT VYR D+SKKK  QSPS  Q +PEI+KVKKRVRFADTEPVIIAI D EER  EEETEKKVVRITVKLTK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKK--QSPSLQQ-QPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSM
        QEANRMLSRCSDGGVLEFGDVA ELMRIPA RVSSSM
Subjt:  QEANRMLSRCSDGGVLEFGDVACELMRIPATRVSSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCAACTTGATTTCAAGCTTGAACAAAAAGCTGCAGGCGGTTGAAATCAGTAATCGCTGCAGACGAACGAAGAAGAAGACGACGACTTACGTATACAGAGACGA
TCTGAGCAAGAAGAAGCAGTCGCCGTCGTTGCAGCAGCAGCCGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCCGATACGGAACCGGTGATAATCGCCATTACTG
ATACAGAGGAGCGGATTGCAGAGGAGGAAACAGAGAAGAAAGTTGTGAGAATTACGGTGAAATTGACGAAACAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGC
GGCGTTCTCGAATTTGGAGATGTGGCTTGTGAACTCATGCGAATTCCTGCAACTCGAGTTAGTTCATCTATGGTGGCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGCAACTTGATTTCAAGCTTGAACAAAAAGCTGCAGGCGGTTGAAATCAGTAATCGCTGCAGACGAACGAAGAAGAAGACGACGACTTACGTATACAGAGACGA
TCTGAGCAAGAAGAAGCAGTCGCCGTCGTTGCAGCAGCAGCCGGAGATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCCGATACGGAACCGGTGATAATCGCCATTACTG
ATACAGAGGAGCGGATTGCAGAGGAGGAAACAGAGAAGAAAGTTGTGAGAATTACGGTGAAATTGACGAAACAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGC
GGCGTTCTCGAATTTGGAGATGTGGCTTGTGAACTCATGCGAATTCCTGCAACTCGAGTTAGTTCATCTATGGTGGCCAATTGA
Protein sequenceShow/hide protein sequence
MISNLISSLNKKLQAVEISNRCRRTKKKTTTYVYRDDLSKKKQSPSLQQQPEIKKVKKRVRFADTEPVIIAITDTEERIAEEETEKKVVRITVKLTKQEANRMLSRCSDG
GVLEFGDVACELMRIPATRVSSSMVAN