; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G007300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G007300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin ligase SINAT3
Genome locationchr07:7889990..7891186
RNA-Seq ExpressionLsi07G007300
SyntenyLsi07G007300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK16544.1 uncharacterized protein E5676_scaffold21G003600 [Cucumis melo var. makuwa]1.0e-6684.21Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+      SVVDEE  SS PDQ SL SESDPDDSSF GCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPFS
        RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKR GQSMDEVTSGGGRTEASAS  RKDSSRYNP IPFS
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPFS

XP_008451929.1 PREDICTED: uncharacterized protein LOC103493082 isoform X1 [Cucumis melo]7.9e-6484.85Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+      SVVDEE  SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYN
        RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASAS  RKDSSR N
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYN

XP_008451930.1 PREDICTED: uncharacterized protein LOC103493082 isoform X2 [Cucumis melo]8.8e-6385.19Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+      SVVDEE  SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS
        RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASAS  RKDSS
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS

XP_011653222.1 uncharacterized protein LOC101208661 isoform X1 [Cucumis sativus]2.6e-6284.05Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGT+LLSVP PFFHSS   RF  TTS  F+SSRP  FLSSSSSSSSSS     SVVDEE  SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSR
        R+QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRT+ASAS GRKDSSR
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSR

XP_038900223.1 uncharacterized protein LOC120087246 isoform X2 [Benincasa hispida]1.2e-6483.43Show/hide
Query:  MGTALLSVPPPFFHSSS-------SYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIE
        MGTALLSVP PFFHSSS       S+R  S TSLRF+SSR +TFLSSSSSSSS+      SVVDEET SSPPDQ SL S+SDPDDSSFRGCKACGREEIE
Subjt:  MGTALLSVPPPFFHSSS-------SYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIE

Query:  RGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS
        RGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGF+ASGGRYKRRGQSMDEVTSGGGRTEASASAG+KDSS
Subjt:  RGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUY4 Uncharacterized protein7.0e-6683.53Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGT+LLSVP PFFHSS   RF  TTS  F+SSRP  FLSSSSSSSSSS     SVVDEE  SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPF
        R+QGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRT+ASAS GRKDSSRYNP I F
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPF

A0A1S3BSL8 uncharacterized protein LOC103493082 isoform X24.3e-6385.19Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+      SVVDEE  SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS
        RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASAS  RKDSS
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSS

A0A1S3BSP7 uncharacterized protein LOC103493082 isoform X13.8e-6484.85Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+      SVVDEE  SS PDQ SL SESDPDDSSFRGCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYN
        RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASAS  RKDSSR N
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYN

A0A5D3D003 Uncharacterized protein4.9e-6784.21Show/hide
Query:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG
        MGTALLSVP PFFHSS   RF  TTSL F+SSRP TFLSSSSSSSS+      SVVDEE  SS PDQ SL SESDPDDSSF GCKACG+EEIERGCNGEG
Subjt:  MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEG

Query:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPFS
        RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKR GQSMDEVTSGGGRTEASAS  RKDSSRYNP IPFS
Subjt:  RIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPFS

A0A6J1J5I4 uncharacterized protein LOC111481538 isoform X17.0e-5877.78Show/hide
Query:  MGTALLSVP----PPFFHSSSS----YRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEI
        MGTALLSVP     PFFHSS +    +     TSLRF+SSR V+FLSSSSSS+        SVVDEET SSPPD  SL SESDPD SSFRGCKACGREEI
Subjt:  MGTALLSVP----PPFFHSSSS----YRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEI

Query:  ERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSR
        ERGCNG+GRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGG R EASA AGRKDSSR
Subjt:  ERGCNGEGRIQGGIATVPGFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42070.1 unknown protein4.4e-2850.68Show/hide
Query:  HSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFG
        +S SS   P        S +   + SSSS   + SS   P  +   + SS P         D +D +F GC+ACG+EE E GCNG+GRIQGGIATVPGFG
Subjt:  HSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVPGFG

Query:  WWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDS
        WWPIKAYRPCP FV +GGRY+R GQSMDEV  G G +++S S    DS
Subjt:  WWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACTGCTCTTCTCTCAGTTCCTCCCCCATTCTTCCACTCCTCATCCTCCTATCGCTTTCCATCCACCACTTCTCTCCGATTTACATCATCTAGACCCGTCACCTT
CCTCTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCACCTTCTGTTGTTGACGAAGAAACTTATTCTTCTCCCCCAGATCAATTCTCTCTTCTCTCTGAAT
CTGACCCAGATGATTCTTCCTTCAGAGGTTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCT
GGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCTGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGG
AGGGAGGACTGAAGCCTCTGCCAGTGCTGGCAGAAAGGACTCGTCGAGGTACAATCCTAATATCCCTTTTTCGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAACTGCTCTTCTCTCAGTTCCTCCCCCATTCTTCCACTCCTCATCCTCCTATCGCTTTCCATCCACCACTTCTCTCCGATTTACATCATCTAGACCCGTCACCTT
CCTCTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTTCACCTTCTGTTGTTGACGAAGAAACTTATTCTTCTCCCCCAGATCAATTCTCTCTTCTCTCTGAAT
CTGACCCAGATGATTCTTCCTTCAGAGGTTGTAAGGCCTGTGGAAGGGAAGAAATTGAGAGGGGATGCAATGGTGAGGGAAGGATACAAGGTGGCATTGCAACAGTCCCT
GGTTTTGGTTGGTGGCCTATAAAGGCATACAGGCCTTGTCCTGGATTTGTAGCATCTGGTGGCAGATATAAGCGGCGTGGACAAAGCATGGACGAGGTTACATCTGGAGG
AGGGAGGACTGAAGCCTCTGCCAGTGCTGGCAGAAAGGACTCGTCGAGGTACAATCCTAATATCCCTTTTTCGAAGTAA
Protein sequenceShow/hide protein sequence
MGTALLSVPPPFFHSSSSYRFPSTTSLRFTSSRPVTFLSSSSSSSSSSSSSSPSVVDEETYSSPPDQFSLLSESDPDDSSFRGCKACGREEIERGCNGEGRIQGGIATVP
GFGWWPIKAYRPCPGFVASGGRYKRRGQSMDEVTSGGGRTEASASAGRKDSSRYNPNIPFSK