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Lsi07G007490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G007490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:8204259..8209315
RNA-Seq ExpressionLsi07G007490
SyntenyLsi07G007490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577123.1 hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1346.96Show/hide
Query:  MASISAFKTFIFIFLIFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEKNKVTRKLFGGAEAFVDYAS
        MAS++AF TF FIFL+F  PNSG AD L+LK+G   ++L     Q R                               VEKNKV RKL  GAE F DYAS
Subjt:  MASISAFKTFIFIFLIFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEKNKVTRKLFGGAEAFVDYAS

Query:  PDHNTRHEPRVGSPG
        P+HN RHEPR+GSPG
Subjt:  PDHNTRHEPRVGSPG

KAG6600409.1 hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1246.96Show/hide
Query:  MASISAFKTFIFIFLIFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEKNKVTRKLFGGAEAFVDYAS
        MAS++AFKTFIFIFL+F  PNSGDAD L LK+G   ++L     Q                               VI+EK K  RKL  GAE  +DYAS
Subjt:  MASISAFKTFIFIFLIFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEKNKVTRKLFGGAEAFVDYAS

Query:  PDHNTRHEPRVGSPG
        P HN RHEPRVG+PG
Subjt:  PDHNTRHEPRVGSPG

KGN53437.1 hypothetical protein Csa_015314 [Cucumis sativus]7.8e-1352.73Show/hide
Query:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT
        KTFIFIFL IF  PNSGDA DLSLKKG   ++L     Q                               +IVEK NKVTRKL  GAEAF DYASPDHNT
Subjt:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT

Query:  RHEPRVGSPG
        RHEPR G+PG
Subjt:  RHEPRVGSPG

TYK16509.1 hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa]7.3e-1149.09Show/hide
Query:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT
        KTFIFIFL IF  P+SGDA DLSLKKG   ++L     Q                               +IVEK N+VTRKL  GAE  +DYASPDHN+
Subjt:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT

Query:  RHEPRVGSPG
        RHEPR GSPG
Subjt:  RHEPRVGSPG

TrEMBL top hitse value%identityAlignment
A0A0A0KYH7 Uncharacterized protein3.8e-1352.73Show/hide
Query:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT
        KTFIFIFL IF  PNSGDA DLSLKKG   ++L     Q                               +IVEK NKVTRKL  GAEAF DYASPDHNT
Subjt:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT

Query:  RHEPRVGSPG
        RHEPR G+PG
Subjt:  RHEPRVGSPG

A0A5D3D203 Uncharacterized protein3.5e-1149.09Show/hide
Query:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT
        KTFIFIFL IF  P+SGDA DLSLKKG   ++L     Q                               +IVEK N+VTRKL  GAE  +DYASPDHN+
Subjt:  KTFIFIFL-IFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEK-NKVTRKLFGGAEAFVDYASPDHNT

Query:  RHEPRVGSPG
        RHEPR GSPG
Subjt:  RHEPRVGSPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAATCCACTCTCTCAATTTCAAATGGCCTCAATTTCTGCCTTCAAGACCTTCATTTTCATCTTCCTCATCTTCGCTTCCCCTAATTCAGGGGATGCTGATGACCT
GAGCTTGAAGAAGGGTAATGATGTTATGGAACTTGTTCAGACGAAACGGCAATGGAGGCACTCTTTTCCACCTACACTTTCCATTCTCACCGTTCATTTCACAAACACAA
ACAGGATATTTCCTCTGATTCTCCTCATTGAAAACGTGATAGTTGAAAAGAACAAAGTGACAAGAAAGCTTTTTGGAGGAGCAGAAGCATTTGTCGACTATGCAAGCCCA
GACCATAACACAAGACATGAGCCAAGAGTGGGAAGCCCTGGAGTTATGAATATTGAGAAGTTCATATGTAATCTAAACTACAAAAGTTTAGGACCGGATAATCTAATATC
TTTATGCATGAAGATAACCAATTTGGTTGATGTGGTTGACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAATCCACTCTCTCAATTTCAAATGGCCTCAATTTCTGCCTTCAAGACCTTCATTTTCATCTTCCTCATCTTCGCTTCCCCTAATTCAGGGGATGCTGATGACCT
GAGCTTGAAGAAGGGTAATGATGTTATGGAACTTGTTCAGACGAAACGGCAATGGAGGCACTCTTTTCCACCTACACTTTCCATTCTCACCGTTCATTTCACAAACACAA
ACAGGATATTTCCTCTGATTCTCCTCATTGAAAACGTGATAGTTGAAAAGAACAAAGTGACAAGAAAGCTTTTTGGAGGAGCAGAAGCATTTGTCGACTATGCAAGCCCA
GACCATAACACAAGACATGAGCCAAGAGTGGGAAGCCCTGGAGTTATGAATATTGAGAAGTTCATATGTAATCTAAACTACAAAAGTTTAGGACCGGATAATCTAATATC
TTTATGCATGAAGATAACCAATTTGGTTGATGTGGTTGACTTCTAG
Protein sequenceShow/hide protein sequence
MVNPLSQFQMASISAFKTFIFIFLIFASPNSGDADDLSLKKGNDVMELVQTKRQWRHSFPPTLSILTVHFTNTNRIFPLILLIENVIVEKNKVTRKLFGGAEAFVDYASP
DHNTRHEPRVGSPGVMNIEKFICNLNYKSLGPDNLISLCMKITNLVDVVDF