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Lsi07G007500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G007500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:8217265..8217977
RNA-Seq ExpressionLsi07G007500
SyntenyLsi07G007500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044962.1 hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa]2.1e-1276.67Show/hide
Query:  LSLKEGLNEE-PNPCGQ-RIG------RKILGN-EAMLMDYNEPSANPSHEPRKGTPGGR
        +SLKEGLNEE  NPCGQ RIG      RKILGN E +LMDYNEPSANPSHEPR+GTPGGR
Subjt:  LSLKEGLNEE-PNPCGQ-RIG------RKILGN-EAMLMDYNEPSANPSHEPRKGTPGGR

KAG6577122.1 hypothetical protein SDJN03_24696, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1151.76Show/hide
Query:  NSMLLKTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQRIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRASFNP
        +SM L T +++F   +L  +S  S G HG                ++ RK+LGNEA+LMDYNEPSANP HEPRKG+PGGRASFNP
Subjt:  NSMLLKTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQRIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRASFNP

KAG6577123.1 hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia]3.8e-0648.68Show/hide
Query:  FFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ------RIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA
        FF + L+ +  NS    GL+LKEGL + PNPCGQ      ++ RK+LG E    DY  P  N  HEPR G+PGGRA
Subjt:  FFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ------RIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA

KAG6600409.1 hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia]4.5e-0750Show/hide
Query:  MPNSMLLKTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQRI-----GRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA
        M +    KT I +F + I      NS    GL LKEGL + PNPCGQ I      RK+LG E  L+DY  PS NP HEPR G PGGRA
Subjt:  MPNSMLLKTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQRI-----GRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA

KAG6600410.1 hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1462.34Show/hide
Query:  ILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQRI-GRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRASFNP
        I+F  +I  S S  S   HG SL+  LNE+PNP  QRI  RK+LG +A LMDY+EP ANPSHEPR+G+PGGRASFNP
Subjt:  ILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQRI-GRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRASFNP

TrEMBL top hitse value%identityAlignment
A0A0A0KYH7 Uncharacterized protein7.0e-0646.43Show/hide
Query:  LKTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ-------RIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA
        +KT I +F I+ +     NS   H LSLK+GL +  NPCGQ       ++ RK+LG EA   DY  P  N  HEPR G PGGRA
Subjt:  LKTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ-------RIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA

A0A5A7TNM7 Uncharacterized protein1.0e-1276.67Show/hide
Query:  LSLKEGLNEE-PNPCGQ-RIG------RKILGN-EAMLMDYNEPSANPSHEPRKGTPGGR
        +SLKEGLNEE  NPCGQ RIG      RKILGN E +LMDYNEPSANPSHEPR+GTPGGR
Subjt:  LSLKEGLNEE-PNPCGQ-RIG------RKILGN-EAMLMDYNEPSANPSHEPRKGTPGGR

A0A5D3D203 Uncharacterized protein3.5e-0546.05Show/hide
Query:  FIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ-------RIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA
        FI +++ +  +S     LSLK+GL +  NPCGQ       R+ RK+LG E +L+DY  P  N  HEPR G+PGGRA
Subjt:  FIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ-------RIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRA

A0A6A1ULL4 Uncharacterized protein6.6e-0440.48Show/hide
Query:  KTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ---RI-GRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRASFNP
        K  I +  ++++ SSS+ ++G      ++ + E   P G+   RI  RK+LG    L DY  PSANP+HEP+KG+PGG+ S NP
Subjt:  KTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQ---RI-GRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRASFNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAATTCCATGCTACTTAAGACCACCATTATTCTCTTCTTTATCATGATCCTCGTCTCCTCTTCCCTTAATTCAGAAGGAGTTCATGGCCTGAGCTTAAAGGAGGG
TTTAAATGAAGAACCAAATCCTTGTGGTCAGAGAATTGGGAGAAAGATTTTGGGAAATGAAGCAATGTTGATGGATTACAATGAACCAAGTGCTAACCCAAGTCACGAGC
CAAGAAAAGGAACTCCTGGAGGTCGAGCAAGCTTCAACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAATTCCATGCTACTTAAGACCACCATTATTCTCTTCTTTATCATGATCCTCGTCTCCTCTTCCCTTAATTCAGAAGGAGTTCATGGCCTGAGCTTAAAGGAGGG
TTTAAATGAAGAACCAAATCCTTGTGGTCAGAGAATTGGGAGAAAGATTTTGGGAAATGAAGCAATGTTGATGGATTACAATGAACCAAGTGCTAACCCAAGTCACGAGC
CAAGAAAAGGAACTCCTGGAGGTCGAGCAAGCTTCAACCCATGA
Protein sequenceShow/hide protein sequence
MPNSMLLKTTIILFFIMILVSSSLNSEGVHGLSLKEGLNEEPNPCGQRIGRKILGNEAMLMDYNEPSANPSHEPRKGTPGGRASFNP