CuGenDBv2

Gene ID	Lsi07G007540
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	C2H2-type domain-containing protein
Genome location	chr07:8245720..8247688
RNA-Seq Expression	Lsi07G007540
Synteny	Lsi07G007540
Gene Ontology terms	NA
InterPro domains	IPR007513 - Uncharacterised protein family SERF, N-terminal IPR013087 - Zinc finger C2H2-type IPR026939 - ZNF706/At2g23090 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

EEF42492.1 conserved hypothetical protein [Ricinus communis]

9.9e-26

94.03

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES
        MTRGKQKIEAQ+RNAE+NQKPKGSQLEARAVALKVICPICK QLAN NQLGDHYASKHPKEKPPSES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES

KAG6577120.1 putative aspartic protease, partial [Cucurbita argyrosperma subsp. sororia]

7.6e-26

94.12

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG
        MTRGKQKIEAQ+RNAEKNQK KGSQ EARAVALKVICPICKVQLAN NQLGDHYASKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG

KAG6600413.1 hypothetical protein SDJN03_05646, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-26

97.01

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES
        MTRGKQKIEAQKRNAEKNQKPKGSQ EARAVALKVICPICKVQLAN NQLGDHYASKHPKEKPPSES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES

KAG7015122.1 hypothetical protein SDJN02_22755 [Cucurbita argyrosperma subsp. argyrosperma]

7.6e-26

94.12

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG
        MTRGKQKIEAQ+RNAEKNQK KGSQ EARAVALKVICPICKVQLAN NQLGDHYASKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG

TYK16504.1 zinc finger protein 706-like protein [Cucumis melo var. makuwa]

1.1e-27

98.53

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG
        MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHY SKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG

TrEMBL top hits

e value

%identity

Alignment

A0A2H5Q785 C2H2-type domain-containing protein

1.8e-25

91.04

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES
        MTRGKQKIEAQKRNAE+NQKPKGSQ+EARAVALKV CPICK QLANQNQ+GDHYASKHPKEKPP+ES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES

A0A5D3CZW8 Zinc finger protein 706-like protein

5.1e-28

98.53

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG
        MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHY SKHPKEKPPSESG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG

B9S1M3 C2H2-type domain-containing protein

4.8e-26

94.03

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES
        MTRGKQKIEAQ+RNAE+NQKPKGSQLEARAVALKVICPICK QLAN NQLGDHYASKHPKEKPPSES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES

D7TFG3 C2H2-type domain-containing protein

6.2e-26

89.71

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG
        MTRGKQKIEAQ+RNAE+NQKPKGSQ EARAVALK+ CPICKVQLANQNQLGDHY+SKHPKEKPPS+SG
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG

V4V2J0 C2H2-type domain-containing protein

1.8e-25

91.04

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Query:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES
        MTRGKQKIEAQKRNAE+NQKPKGSQ+EARAVALKV CPICK QLANQNQ+GDHYASKHPKEKPP+ES
Subjt:  MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSES

SwissProt top hits

e value

%identity

Alignment

Q5ZMM5 Zinc finger protein 706

2.9e-04

37.14

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Query:  MTRGKQKIEAQKRNAEKNQKPK----GSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSE
        M RG+QKI++Q++NA+K  + K      Q  A   AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEKNQKPK----GSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSE

Q9D115 Zinc finger protein 706

2.9e-04

38.57

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Query:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANQNQLGDHYASKHPKEKPPSE
        M RG+QKI++Q++NA+K    +K +G   +A A  AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANQNQLGDHYASKHPKEKPPSE

Q9Y5V0 Zinc finger protein 706

2.9e-04

38.57

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Query:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANQNQLGDHYASKHPKEKPPSE
        M RG+QKI++Q++NA+K    +K +G   +A A  AL   C +C+ Q+ +      H+ SKHPK   P E
Subjt:  MTRGKQKIEAQKRNAEK---NQKPKGSQLEARA-VALKVICPICKVQLANQNQLGDHYASKHPKEKPPSE

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGACCCGAGGAAAGCAGAAGATCGAAGCTCAGAAACGAAATGCGGAGAAAAATCAGAAGCCGAAAGGCTCACAGCTTGAGGCCAGAGCCGTTGCCCTTAAAGTCATCTG
CCCTATTTGCAAGGTACAGCTTGCAAATCAGAACCAGTTGGGTGATCATTATGCCTCCAAACATCCAAAGGAAAAGCCACCATCAGAATCTGGCTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MTRGKQKIEAQKRNAEKNQKPKGSQLEARAVALKVICPICKVQLANQNQLGDHYASKHPKEKPPSESG

Lsi07G007540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome