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Lsi07G007640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G007640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein
Genome locationchr07:8330023..8330679
RNA-Seq ExpressionLsi07G007640
SyntenyLsi07G007640
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148978.1 uncharacterized protein LOC101205531 [Cucumis sativus]8.0e-4895.05Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHV GE TPWVLDGRTGIYYPKGHEKVL SIPDGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
XP_008451903.1 PREDICTED: uncharacterized protein LOC103493056 [Cucumis melo]1.4e-4794.06Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHV GEATPWVLDGRTGIYYPKGHEKVL+ IPDGGGA VNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
XP_022931383.1 uncharacterized protein LOC111437581 [Cucurbita moschata]8.8e-4795Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPWVLDGRTGIYYPKGHE VLESIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
XP_023552297.1 uncharacterized protein LOC111810002 [Cucurbita pepo subsp. pepo]2.0e-4694Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAF+RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPWVLDGRTGIYYPKGHE VLESIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
XP_038884831.1 uncharacterized protein LOC120075477 [Benincasa hispida]2.1e-4896.04Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAF RGAQTMNSMFFKPIGRKGFHRKSSSPDM+RERVETESKE+KSNKSHV GEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
TrEMBL top hitse value%identityAlignment
A0A0A0KX78 Uncharacterized protein3.9e-4895.05Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHV GE TPWVLDGRTGIYYPKGHEKVL SIPDGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
A0A1S3BTQ2 uncharacterized protein LOC1034930566.6e-4894.06Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+SHV GEATPWVLDGRTGIYYPKGHEKVL+ IPDGGGA VNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
A0A6J1C4X8 uncharacterized protein LOC1110083063.1e-4593Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKE+KSNKSHV GEATPW+LD RTGIYYPKGHEKVLESIPDGGGAAVN QVN F+DEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
A0A6J1EYH0 uncharacterized protein LOC1114375814.3e-4795Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPWVLDGRTGIYYPKGHE VLESIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
A0A6J1J914 uncharacterized protein LOC1114828451.2e-4694Show/hide
Query:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAQ+MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKS V GE TPWVLDGRTGIYYPKGHE VLESIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein8.6e-1643.56Show/hide
Query:  RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETE----SKELKSNK-----SHVEGEATPWVLDGRTGIYYPKGHEKVLESI-PDGGGAAVNTQVNWF
        RGAQTMN+MF KP+ RK  H+KS+S D++R+ V+TE     +E+K+ +           A+ WV    TGIYYPKG EKV++ + P   G+  +  VNWF
Subjt:  RGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETE----SKELKSNK-----SHVEGEATPWVLDGRTGIYYPKGHEKVLESI-PDGGGAAVNTQVNWF

Query:  N
        +
Subjt:  N
AT3G19550.1 unknown protein5.8e-0429.85Show/hide
Query:  GRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGA
        GR G   K++  + M   +    +++  +     GE   WV   RTGI++P G E V+E +P+G  +
Subjt:  GRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAGCATTTGTGAGAGGGGCTCAGACAATGAACTCCATGTTCTTCAAACCGATTGGGCGAAAGGGCTTTCACAGGAAAAGCTCTTCTCCAGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGCAATAAGAGCCATGTGGAGGGTGAGGCAACTCCTTGGGTGCTTGATGGGCGAACTGGAATTTATTATCCTAAAGGCC
ACGAGAAGGTCCTCGAGAGCATTCCCGACGGCGGCGGTGCTGCAGTTAACACCCAGGTCAATTGGTTTAACGATGAAAACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAGCATTTGTGAGAGGGGCTCAGACAATGAACTCCATGTTCTTCAAACCGATTGGGCGAAAGGGCTTTCACAGGAAAAGCTCTTCTCCAGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGCAATAAGAGCCATGTGGAGGGTGAGGCAACTCCTTGGGTGCTTGATGGGCGAACTGGAATTTATTATCCTAAAGGCC
ACGAGAAGGTCCTCGAGAGCATTCCCGACGGCGGCGGTGCTGCAGTTAACACCCAGGTCAATTGGTTTAACGATGAAAACATTTAA
Protein sequenceShow/hide protein sequence
MATAFVRGAQTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNKSHVEGEATPWVLDGRTGIYYPKGHEKVLESIPDGGGAAVNTQVNWFNDENI