; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G007750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G007750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L29
Genome locationchr07:8452686..8463669
RNA-Seq ExpressionLsi07G007750
SyntenyLsi07G007750
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0007059 - chromosome segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domainsIPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]5.9e-5876.19Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI--------------------------QVGLILDNVEQLLEQQ
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI                          QVGL+LDNVEQLLE+Q
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI--------------------------QVGLILDNVEQLLEQQ

Query:  DLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        DLDPLYSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K+
Subjt:  DLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
XP_008451872.1 PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo]5.9e-5878.53Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL
        M KKHEIDTPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFI                     QVGL+LDNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNIVEI+N LSM K  EIQHLKDMLKTAEEQNR+IQGRIDVLRKGVQD SGMADAVKK+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]1.6e-5878.53Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI                     QVGL+LDNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]1.0e-5777.91Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ---------------------VGLILDNVEQLLEQQDLDPL
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQ                     VGL+LDNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ---------------------VGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]1.6e-5879.75Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL
        MEKK EIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFS+FT AEQEYLHRLFI                     QVGL+LDNVEQLLE+Q+LDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNI+EIAN LS+TKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQD S MADAVKK+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
TrEMBL top hitse value%identityAlignment
A0A0A0KV94 Uncharacterized protein1.3e-5576.07Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL
        M +KHE+D PVSS QIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQ+YLHRLFI                     QVGL+ DNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNIVEI N LSMTKK EIQHLKDMLKTAEEQN +IQGRID LRKGVQD SGMADAVKK+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
A0A1S3BTB0 uncharacterized protein LOC1034930302.9e-5878.53Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL
        M KKHEIDTPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFI                     QVGL+LDNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNIVEI+N LSM K  EIQHLKDMLKTAEEQNR+IQGRIDVLRKGVQD SGMADAVKK+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
A0A5A7TAS4 Uncharacterized protein2.9e-5878.53Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL
        M KKHEIDTPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFI                     QVGL+LDNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNIVEI+N LSM K  EIQHLKDMLKTAEEQNR+IQGRIDVLRKGVQD SGMADAVKK+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X17.5e-5978.53Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI                     QVGL+LDNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFI---------------------QVGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X14.9e-5877.91Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ---------------------VGLILDNVEQLLEQQDLDPL
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQ                     VGL+LDNVEQLLE+QDLDPL
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ---------------------VGLILDNVEQLLEQQDLDPL

Query:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
        YSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K+
Subjt:  YSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19350.1 embryo defective 30064.0e-2846.06Show/hide
Query:  MEKK-HEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLF---------------------IQVGLILDNVEQLLEQQDLDP
        MEK  HE D    S +  LKKSFK  +R LLT+CS+++F + FS+F+ AEQE L +L+                      QVG ILD VE+L+E+Q LDP
Subjt:  MEKK-HEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLF---------------------IQVGLILDNVEQLLEQQDLDP

Query:  LYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVN
        L+S KT+++ IA  L+ +KKNEIQ L  +L+ AEEQNR  + RI +L+K  QD+SG AD ++K+N
Subjt:  LYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGCACGAGATTGATACTCCGGTGAGCTCCAGCCAGATTGATCTGAAAAAGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGTGGGACTTATACTTGATAATGTTGAACAACTTTTGGAACAGC
AAGATCTAGACCCATTGTATTCCAAGAAGACTAATATTGTGGAAATTGCCAATTGTCTGTCCATGACAAAGAAGAATGAGATTCAACACTTGAAGGACATGCTAAAAACG
GCCGAGGAACAGAACCGGCTTATTCAAGGCCGTATCGATGTCCTAAGGAAAGGAGTGCAAGATGTCTCAGGCATGGCAGATGCTGTTAAAAAGGTAAATTTGAATCTCAT
TGATTGGAGAGGATCGAAGATGCTCGACAGCTCAATGAAAGCTGATGCGTACTATCCTTTAAGGTCAGAGATGGCAGCCACGAATCCAAGCAAACCAATTTTAGTTCCTT
CCGTGGCGCCACGTTCCAACAAATATTGTGAATTCAATTTTGACCTCCTAAGAAGGAATAGATGA
mRNA sequenceShow/hide mRNA sequence
GTTTCAACTCCGAAAATCTCCCGCTAACTAGTTCAGAATTCTCGGACTTCAATTTCTTCGTCAGTTTGCAGTTCGTCCATTAGTCGTCACCGTAGCCTCCGCCACCTTGG
CTCGACGGCACTGACCGGGGATCAACTCACCAACTCGTTTCACTTGCAGCCGCTTTCTAATTTCTTCTTCCTGTCGCTGTCGCGCCATTTCCACATAGTTAAATGTCAGC
GCAGAATTTAGCAAGATAGGGTTGGGGATCGTAGTGTACACAACTTTTGAAAATGGAGAAGAAGCACGAGATTGATACTCCGGTGAGCTCCAGCCAGATTGATCTGAAAA
AGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGAGTTTCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTT
TTCATTCAGGTGGGACTTATACTTGATAATGTTGAACAACTTTTGGAACAGCAAGATCTAGACCCATTGTATTCCAAGAAGACTAATATTGTGGAAATTGCCAATTGTCT
GTCCATGACAAAGAAGAATGAGATTCAACACTTGAAGGACATGCTAAAAACGGCCGAGGAACAGAACCGGCTTATTCAAGGCCGTATCGATGTCCTAAGGAAAGGAGTGC
AAGATGTCTCAGGCATGGCAGATGCTGTTAAAAAGGTAAATTTGAATCTCATTGATTGGAGAGGATCGAAGATGCTCGACAGCTCAATGAAAGCTGATGCGTACTATCCT
TTAAGGTCAGAGATGGCAGCCACGAATCCAAGCAAACCAATTTTAGTTCCTTCCGTGGCGCCACGTTCCAACAAATATTGTGAATTCAATTTTGACCTCCTAAGAAGGAA
TAGATGA
Protein sequenceShow/hide protein sequence
MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQVGLILDNVEQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKT
AEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVNLNLIDWRGSKMLDSSMKADAYYPLRSEMAATNPSKPILVPSVAPRSNKYCEFNFDLLRRNR