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Lsi07G008270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G008270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:9194211..9196691
RNA-Seq ExpressionLsi07G008270
SyntenyLsi07G008270
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8086008.1 hypothetical protein EE612_009054 [Oryza sativa]8.6e-0655.93Show/hide
Query:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS
        LT RS+KS I  G +IF SS  ISPVS+ TT+D+ GR F  SCV   PIFR +QA + S
Subjt:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS

KAF7097982.1 hypothetical protein CFC21_099757 [Triticum aestivum]6.2e-0443.4Show/hide
Query:  AVKVADVTV---EDASDDIVEFPRMFVPEDRLSEDIPSLFPFFSSGSLTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYL
        AVKV +V V    D +DD  E   M V  D   +D+  L        L+FRS+KS I  G VI   S   SP SI  TVDM GR F    V   P FR L
Subjt:  AVKVADVTV---EDASDDIVEFPRMFVPEDRLSEDIPSLFPFFSSGSLTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYL

Query:  QASSAS
         ASS S
Subjt:  QASSAS

KAG5546805.1 hypothetical protein RHGRI_018841 [Rhododendron griersonianum]1.1e-0868.52Show/hide
Query:  MKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS
        MKSEI  GFVI   S+ ISPV+I TTVDM+GR FG S VQ RPIF+ LQA+SAS
Subjt:  MKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS

KVI10309.1 hypothetical protein Ccrd_011331 [Cynara cardunculus var. scolymus]1.4e-1171.19Show/hide
Query:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS
        L  RSMKSE+ PGFVI  SS  ISP +I TTVD+ GRSFGLS V  RPIF+YLQASSAS
Subjt:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS

VAI79957.1 unnamed protein product [Triticum turgidum subsp. durum]2.8e-0443.4Show/hide
Query:  AVKVADVTV---EDASDDIVEFPRMFVPEDRLSEDIPSLFPFFSSGSLTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYL
        AVKV +V V    D  DD  E   M V  D   +D+  L        L+FRS+KS I  G VI  +S   SP +I  TVDM GR F    V  RP FR L
Subjt:  AVKVADVTV---EDASDDIVEFPRMFVPEDRLSEDIPSLFPFFSSGSLTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYL

Query:  QASSAS
         ASS S
Subjt:  QASSAS

TrEMBL top hitse value%identityAlignment
A0A0P0VF91 Os02g0165200 protein4.2e-0655.93Show/hide
Query:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS
        LT RS+KS I  G +IF SS  ISPVS+ TT+D+ GR F  SCV   PIFR +QA + S
Subjt:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS

A0A103YJJ2 Uncharacterized protein6.6e-1271.19Show/hide
Query:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS
        L  RSMKSE+ PGFVI  SS  ISP +I TTVD+ GRSFGLS V  RPIF+YLQASSAS
Subjt:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS

A0A446XUR6 Uncharacterized protein1.3e-0443.4Show/hide
Query:  AVKVADVTV---EDASDDIVEFPRMFVPEDRLSEDIPSLFPFFSSGSLTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYL
        AVKV +V V    D  DD  E   M V  D   +D+  L        L+FRS+KS I  G VI  +S   SP +I  TVDM GR F    V  RP FR L
Subjt:  AVKVADVTV---EDASDDIVEFPRMFVPEDRLSEDIPSLFPFFSSGSLTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYL

Query:  QASSAS
         ASS S
Subjt:  QASSAS

J3L9V7 Uncharacterized protein1.3e-0455.93Show/hide
Query:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS
        LT RSMKS I  G +I   S   SPVS+ TT D+ GR F  SCV   PIFR LQA S S
Subjt:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS

Q0E3M8 Os02g0165200 protein4.2e-0655.93Show/hide
Query:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS
        LT RS+KS I  G +IF SS  ISPVS+ TT+D+ GR F  SCV   PIFR +QA + S
Subjt:  LTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQASSAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAAGATGAGAAAGTATTCCTGTCATATGGTGCAGTGAAGGTTGCAGATGTCACAGTTGAGGACGCTTCAGATGACATTGTTGAATTTCCAAGGATGTTTGTTCC
AGAGGATAGACTATCAGAAGACATCCCCTCTCTATTCCCTTTCTTTTCCTCTGGATCCCTTACTTTTAGATCCATGAAGTCCGAAATCAACCCCGGTTTCGTTATCTTTC
TATCTTCAATACTCATCTCGCCCGTTAGCATCTTTACCACAGTCGACATGGATGGACGGAGTTTTGGACTGTCTTGCGTGCAAAGTAGACCTATCTTTAGATATTTACAA
GCCTCTTCAGCATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAAAGATGAGAAAGTATTCCTGTCATATGGTGCAGTGAAGGTTGCAGATGTCACAGTTGAGGACGCTTCAGATGACATTGTTGAATTTCCAAGGATGTTTGTTCC
AGAGGATAGACTATCAGAAGACATCCCCTCTCTATTCCCTTTCTTTTCCTCTGGATCCCTTACTTTTAGATCCATGAAGTCCGAAATCAACCCCGGTTTCGTTATCTTTC
TATCTTCAATACTCATCTCGCCCGTTAGCATCTTTACCACAGTCGACATGGATGGACGGAGTTTTGGACTGTCTTGCGTGCAAAGTAGACCTATCTTTAGATATTTACAA
GCCTCTTCAGCATCGTAG
Protein sequenceShow/hide protein sequence
MDKDEKVFLSYGAVKVADVTVEDASDDIVEFPRMFVPEDRLSEDIPSLFPFFSSGSLTFRSMKSEINPGFVIFLSSILISPVSIFTTVDMDGRSFGLSCVQSRPIFRYLQ
ASSAS