; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G008300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G008300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCASP-like protein
Genome locationchr07:9259652..9263239
RNA-Seq ExpressionLsi07G008300
SyntenyLsi07G008300
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006459 - Casparian strip membrane protein
IPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147759.1 CASP-like protein F16 [Cucumis sativus]3.5e-7077.5Show/hide
Query:  NNKYTNNGNTSPPLTSS-DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA------------
        +NKYTN  N  P L+SS D +LAATGMR ADTLLRLVPMGLC+AALIVMLKNS+ +DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA            
Subjt:  NNKYTNNGNTSPPLTSS-DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA------------

Query:  ---------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH
                 LLTYLTLAAGTVSTEVLYLAYNGD EITWS+ACGTFGKFC+KATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHP++  QLQ P FH
Subjt:  ---------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH

XP_008451819.1 PREDICTED: CASP-like protein F16 [Cucumis melo]2.2e-7277.89Show/hide
Query:  NNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-------------
        +NKYTN  N  P L+SSD +LAATGMR ADTLLRLVPMGLC+AALIVMLKNS+ +DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA             
Subjt:  NNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-------------

Query:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH
                LLTYLTLAAGTVSTEVLYLAYNGDTEITWS+ACGTFGKFC+KATASVVITF+VVAFYAFISILSSYKLFSRYNAPLPHP++  QLQ+P FH
Subjt:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH

XP_022941677.1 CASP-like protein 2A1 [Cucurbita moschata]2.0e-6571.72Show/hide
Query:  NNKYTNNGNTSPPLTS--SDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------
        ++KY+ NG  +   +S  +D++L+++GMR ADTLLRL  MGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVH NGICAGYSFLSA            
Subjt:  NNKYTNNGNTSPPLTS--SDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------

Query:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF
                  LLTY+TLAAGTVSTEVLYLAYNGDTEITWS+ACG+FGKFC+KATASVVITFVVVAFYAFISILSSYKLF RY+AP+P PS QL+I AF
Subjt:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF

XP_023525986.1 CASP-like protein 2A1 [Cucurbita pepo subsp. pepo]5.2e-6672Show/hide
Query:  NNKYTNNGNTSPPLTSS----DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA---------
        ++KY+ NG  +    SS    D+TL+++GMR ADTLLRL  MGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVH NGICAGYSFLSA          
Subjt:  NNKYTNNGNTSPPLTSS----DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA---------

Query:  ------------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF
                    LLTY+TLAAGTVSTEVLYLAYNGDTEITWS+ACG+FGKFC+KATASVVITFVVVAFYAFISILSSYKLF RY+AP+P PS QL+I AF
Subjt:  ------------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF

XP_038877964.1 CASP-like protein 2A1 [Benincasa hispida]1.9e-7680.69Show/hide
Query:  MDNNKYTNNGN---TSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA--------
        MD+NKY NN N   + PPLTSSD +L ATGMRT DTLLRLVPMGLCVAALIVMLKNSQT+DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA        
Subjt:  MDNNKYTNNGN---TSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA--------

Query:  -------------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPA
                     LLTYLTLAAGTVSTEVLYLAYNGDTEITWS+ACGTFGKFC+KATASVVITFVVVAFYAFISI SSYKLFSRYNAPLP PS QLQIPA
Subjt:  -------------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPA

Query:  FH
        FH
Subjt:  FH

TrEMBL top hitse value%identityAlignment
A0A0A0KVC7 CASP-like protein1.7e-7077.5Show/hide
Query:  NNKYTNNGNTSPPLTSS-DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA------------
        +NKYTN  N  P L+SS D +LAATGMR ADTLLRLVPMGLC+AALIVMLKNS+ +DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA            
Subjt:  NNKYTNNGNTSPPLTSS-DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA------------

Query:  ---------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH
                 LLTYLTLAAGTVSTEVLYLAYNGD EITWS+ACGTFGKFC+KATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHP++  QLQ P FH
Subjt:  ---------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH

A0A1S3BSC6 CASP-like protein1.1e-7277.89Show/hide
Query:  NNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-------------
        +NKYTN  N  P L+SSD +LAATGMR ADTLLRLVPMGLC+AALIVMLKNS+ +DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA             
Subjt:  NNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-------------

Query:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH
                LLTYLTLAAGTVSTEVLYLAYNGDTEITWS+ACGTFGKFC+KATASVVITF+VVAFYAFISILSSYKLFSRYNAPLPHP++  QLQ+P FH
Subjt:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH

A0A5A7VB95 CASP-like protein1.1e-7277.89Show/hide
Query:  NNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-------------
        +NKYTN  N  P L+SSD +LAATGMR ADTLLRLVPMGLC+AALIVMLKNS+ +DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA             
Subjt:  NNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-------------

Query:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH
                LLTYLTLAAGTVSTEVLYLAYNGDTEITWS+ACGTFGKFC+KATASVVITF+VVAFYAFISILSSYKLFSRYNAPLPHP++  QLQ+P FH
Subjt:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN--QLQIPAFH

A0A6J1FN57 CASP-like protein9.5e-6671.72Show/hide
Query:  NNKYTNNGNTSPPLTS--SDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------
        ++KY+ NG  +   +S  +D++L+++GMR ADTLLRL  MGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVH NGICAGYSFLSA            
Subjt:  NNKYTNNGNTSPPLTS--SDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------

Query:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF
                  LLTY+TLAAGTVSTEVLYLAYNGDTEITWS+ACG+FGKFC+KATASVVITFVVVAFYAFISILSSYKLF RY+AP+P PS QL+I AF
Subjt:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF

A0A6J1IZN6 CASP-like protein1.2e-6571.21Show/hide
Query:  NNKYTNNGNTSPPLTS--SDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------
        ++KY+ NG  +   +S  +D++L+++GMR ADTLLRL  MGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVH NGICAGYSFLSA            
Subjt:  NNKYTNNGNTSPPLTS--SDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------

Query:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF
                  LLTY+TLAAGTVSTEVLYLAYNGDTEITWS+ACG+FGKFC+KATASVVITFVVVAFYAFISILSSYKLF RY+AP+P PS QL++ AF
Subjt:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF

SwissProt top hitse value%identityAlignment
A7QBZ2 CASP-like protein 2A16.6e-4855.8Show/hide
Query:  DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSA---------------------ALLTYLTLAA
        D++   + MRT +TLLRLVP+ LC  +L+VMLKNSQT+D+GS++YSDLGAF++LVHANGICAGYS LSA                      +LTYL LAA
Subjt:  DQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSA---------------------ALLTYLTLAA

Query:  GTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAFHA
        G VSTEV+YLAY GD  +TWS AC +FG FC K TAS+ ITFV V  YA +S++SSYKLFS+Y+AP+      ++I AFH+
Subjt:  GTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAFHA

B9GHX8 CASP-like protein 2A21.2e-4660.61Show/hide
Query:  MRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAAL---------------------LTYLTLAAGTVSTEVL
        MRTA+T+LRLVP+ LCV+AL+VMLKN+QT+DYGS++YSDLGAF++LV+ANGICAGYS LSA +                     LTY+ LAAGTVSTEVL
Subjt:  MRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAAL---------------------LTYLTLAAGTVSTEVL

Query:  YLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQ
        YLA  GDT I WS+AC +FG FC+KA  S VITFV V FYA +S++SSYKLFS+Y+AP+   S +
Subjt:  YLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQ

B9I0G0 CASP-like protein 2A11.0e-4861.05Show/hide
Query:  RTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAAL---------------------LTYLTLAAGTVSTEVLY
        RTA+T+LRLVPM LCV+AL+VMLKN+QT+DYGS++YSDLGAF++LVH NGICAGYS LSA +                     LTY+ LAAGTVSTEVLY
Subjt:  RTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAAL---------------------LTYLTLAAGTVSTEVLY

Query:  LAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP-LPHPSNQLQIPAFH
        LA  GDT ITWS AC +FG FC+KA  S+VITFVVV  YA +S+LSSYKLFS+Y++P L +P   ++I  FH
Subjt:  LAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP-LPHPSNQLQIPAFH

C6TCJ2 CASP-like protein 2A22.5e-4756.65Show/hide
Query:  TGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAAL---------------------LTYLTLAAGTVSTE
        + +RTA+T LRL P+GLCV+AL++MLK+SQ ++YGSV YSDLGAF++LVHANGICAGYS  SA +                     LTY+ LAAG VSTE
Subjt:  TGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAAL---------------------LTYLTLAAGTVSTE

Query:  VLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF
        VLYLA NGD   TWSSACG+FG+FC+K TASV ITFV V  Y  +S++SSYKLF++Y+AP   P+  +++ AF
Subjt:  VLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAF

Q8W4Z5 CASP-like protein F165.6e-4752.71Show/hide
Query:  TNNGNTSPPLTSSDQTLAA----------TGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSA--------
        +  GN   P T S   L            T MRTA+T+LRLVPM L VAAL+VMLKNSQ++D+GSV+YSDLGAF++LVHANGICAGYS LSA        
Subjt:  TNNGNTSPPLTSSDQTLAA----------TGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSA--------

Query:  -------------ALLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIP
                      +LTY+ L A  VSTEVLYLA  GD+ ITWS+ACGTF  FC+KAT +VVITFV V  YA +S++SSY+LF++++AP+ +PS  ++  
Subjt:  -------------ALLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIP

Query:  AFH
         FH
Subjt:  AFH

Arabidopsis top hitse value%identityAlignment
AT1G17200.1 Uncharacterised protein family (UPF0497)5.7e-4751.26Show/hide
Query:  DNNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA------------
        D++K ++ G+        ++T  + G+RTA+T+LRL P+GLCVAAL+VMLK+S+T+++GS++YS+L AF++LVHANGICAGYS LSAA            
Subjt:  DNNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAA------------

Query:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP-LPHPSNQLQIPAF
                  LLTYL LAAG VS EVLYLAYNGD+ ITWS AC ++G FC++ATASV+ITF VV FY  +S++SSYKLF+R++ P +   +  L++  F
Subjt:  ----------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP-LPHPSNQLQIPAF

AT1G17200.2 Uncharacterised protein family (UPF0497)3.4e-2359.55Show/hide
Query:  LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP-LPHPSNQLQIPAF
        LLTYL LAAG VS EVLYLAYNGD+ ITWS AC ++G FC++ATASV+ITF VV FY  +S++SSYKLF+R++ P +   +  L++  F
Subjt:  LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP-LPHPSNQLQIPAF

AT3G14380.1 Uncharacterised protein family (UPF0497)3.6e-3345.57Show/hide
Query:  RTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSA----------------------ALLTYLTLAAGTVSTEVL
        ++A+ +LR+  M L +  L++M+KNS ++++GSV+YS++GAF +LV ANG+CA YS LSA                       ++TY+ LAAG VS E +
Subjt:  RTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSA----------------------ALLTYLTLAAGTVSTEVL

Query:  YLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP
        YLAY G+  ITWSSAC ++G FC+ A  SVV TFVV   Y  +S++SSY+LF+R+ AP
Subjt:  YLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAP

AT5G06200.1 Uncharacterised protein family (UPF0497)3.6e-0931.25Show/hide
Query:  GMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGS------VAYSDLGAFKFLVHANGICAGYSFLS--------------AALLTYLTL---------A
        G+   D LLRL  +   +AA   M  + +T  + +       +Y DL  F+F V A  I AGY  LS              A  L  L L         A
Subjt:  GMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGS------VAYSDLGAFKFLVHANGICAGYSFLS--------------AALLTYLTL---------A

Query:  AGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKL
        A + +  ++YLA+NG+T   W   C  FG FC K + +VV  F  V F A + ++S   L
Subjt:  AGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKL

AT5G54980.1 Uncharacterised protein family (UPF0497)1.9e-1325.93Show/hide
Query:  DNNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTD-DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------
        DNN            +   Q  A   ++  D+ LRL  + L VA + + + N +++ DYG++ Y+ +   K++V  + I A Y+ LS             
Subjt:  DNNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTD-DYGSVAYSDLGAFKFLVHANGICAGYSFLSAA-----------

Query:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN
                +L Y+   +   +TE++YL   GD  +TWS  C ++  +C+K T ++ +   V+ F+ F+S++S+Y+ FS ++ P    +N
Subjt:  --------LLTYLTLAAGTVSTEVLYLAYNGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATAACAAATACACCAATAATGGTAATACATCTCCGCCCCTAACCTCCTCCGATCAAACCCTCGCCGCCACCGGCATGCGGACCGCCGACACCTTGCTCCGCCT
TGTGCCGATGGGCCTCTGCGTCGCTGCACTTATTGTCATGCTCAAGAACTCTCAGACCGACGACTATGGCTCTGTCGCTTACTCCGACCTCGGAGCTTTCAAGTTTTTGG
TGCATGCTAATGGGATATGCGCTGGCTACTCGTTTTTGTCGGCGGCGCTATTGACGTATCTAACCCTAGCGGCGGGGACGGTGTCGACGGAGGTGTTGTACCTAGCCTAC
AATGGTGACACTGAAATAACATGGAGTTCAGCCTGTGGGACATTTGGGAAATTCTGCAACAAAGCTACAGCTTCAGTTGTCATCACCTTTGTTGTGGTTGCTTTCTATGC
TTTCATTTCCATTTTATCTTCTTACAAACTCTTTAGTAGGTACAATGCTCCATTGCCTCATCCTTCCAACCAACTTCAGATTCCAGCCTTCCATGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATAATATATGGTCAGTTCTTGATCAGAAAACCCAATTTATTAAGGTCCTTATTCAATTGCACTGTGCAACTTCACCAACCGTCATTAAAACTTCAATGCCTTATAATTCC
ACCCACCAAATTAACATAAACCAACACACACTCTCCAAAAACCCTCACTCATAAACCACATCCCATTATCCCTTCCTTTTTTTTCCTTTCTAAAAAAAAGTTATTTTCCC
ATATGGACAATAACAAATACACCAATAATGGTAATACATCTCCGCCCCTAACCTCCTCCGATCAAACCCTCGCCGCCACCGGCATGCGGACCGCCGACACCTTGCTCCGC
CTTGTGCCGATGGGCCTCTGCGTCGCTGCACTTATTGTCATGCTCAAGAACTCTCAGACCGACGACTATGGCTCTGTCGCTTACTCCGACCTCGGAGCTTTCAAGTTTTT
GGTGCATGCTAATGGGATATGCGCTGGCTACTCGTTTTTGTCGGCGGCGCTATTGACGTATCTAACCCTAGCGGCGGGGACGGTGTCGACGGAGGTGTTGTACCTAGCCT
ACAATGGTGACACTGAAATAACATGGAGTTCAGCCTGTGGGACATTTGGGAAATTCTGCAACAAAGCTACAGCTTCAGTTGTCATCACCTTTGTTGTGGTTGCTTTCTAT
GCTTTCATTTCCATTTTATCTTCTTACAAACTCTTTAGTAGGTACAATGCTCCATTGCCTCATCCTTCCAACCAACTTCAGATTCCAGCCTTCCATGCCTAGCTTTTCAT
AATTTGCTTTTGTTTATCTTCTCATACTTCTATCTCTAGATCATCGTGTGCTGCAATTGTGTGTACATTGTGTTAGTGCAAAAGGCATTAAGAACTTCTAAGGTTTCCTA
GTGAAATATTACAATAATAATAATCCCTTTGGTTTCTTATGTTTAAATTGTTAGTTATTGTTTAGGGTAATTGTAATGAGTAGCAATTTTAAGGATATTAACAAAGTGTA
TAGTAACATTTTTAAAAAATTGCGCATACAACAAAGTCTATCAGTGATAGACTTCTATCGCTGATAGACTCTTATGGTCTACAGTAATATGATTATTTAGTCCATAAAAG
TCTATCAACGACAGAAGTCTAGATAGACTTTCCTTTA
Protein sequenceShow/hide protein sequence
MDNNKYTNNGNTSPPLTSSDQTLAATGMRTADTLLRLVPMGLCVAALIVMLKNSQTDDYGSVAYSDLGAFKFLVHANGICAGYSFLSAALLTYLTLAAGTVSTEVLYLAY
NGDTEITWSSACGTFGKFCNKATASVVITFVVVAFYAFISILSSYKLFSRYNAPLPHPSNQLQIPAFHA