CuGenDBv2

Gene ID	Lsi07G008470
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	chr07:9526745..9532113
RNA-Seq Expression	Lsi07G008470
Synteny	Lsi07G008470
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QBW96545.1 photosystem I P700 chlorophyll a apoprotein A1 [Pelargonium aff. lobatum SJK-2019]

6.1e-12

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

QKV47348.1 photosystem I P700 chlorophyll a apoprotein A1 [Brainea insignis]

6.1e-12

92.68

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Query:  RRELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        R+ELIESIVWAHNKLKVAP TQPRALSI+QGRAVGVTHYLL
Subjt:  RRELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

YP_009425459.1 photosystem I P700 chlorophyll a apoprotein A1 [Austroblechnum melanocaulon]

4.7e-12

95.12

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Query:  RRELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        R+ELIESIVWAHNKLKVAP TQPRALSIVQGRAVGVTHYLL
Subjt:  RRELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

YP_009431390.1 photosystem I P700 apoprotein A1 [Anthericum ramosum]

6.1e-12

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

YP_009681135.1 photosystem I P700 apoprotein A1 [Sagittaria trifolia]

6.1e-12

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

TrEMBL top hits

e value

%identity

Alignment

A0A218KG56 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-12

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

A0A248R9I0 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-12

95.12

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Query:  RRELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        R+ELIESIVWAHNKLKVAP TQPRALSIVQGRAVGVTHYLL
Subjt:  RRELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

A0A291PUL4 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-12

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

A0A481XQM4 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-12

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

A0A4D5YBY5 Photosystem I P700 chlorophyll a apoprotein A1

3.0e-12

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

SwissProt top hits

e value

%identity

Alignment

A4QJB5 Photosystem I P700 chlorophyll a apoprotein A1

8.0e-15

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

A4QJJ9 Photosystem I P700 chlorophyll a apoprotein A1

8.0e-15

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

A4QK18 Photosystem I P700 chlorophyll a apoprotein A1

8.0e-15

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

Q3V534 Photosystem I P700 chlorophyll a apoprotein A1

8.0e-15

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

Q70Y03 Photosystem I P700 chlorophyll a apoprotein A1

8.0e-15

97.5

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00350.1 Photosystem I, PsaA/PsaB protein

7.5e-16

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Query:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL
        +ELIESIVWAHNKLKVAPATQPRALSI+QGRAVGVTHYLL
Subjt:  RELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLL

Sequences

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CDS sequence

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ATGCCAAAGGACGAATGCGCAGTTATGATGACTAGAGGACTGCAGCAATGGAGAGCGGCTTGTAGGAGAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAA
AGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGAACAAAAGATACGGTAG

mRNA sequence

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Protein sequence

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MPKDECAVMMTRGLQQWRAACRRELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLEQKIR

Lsi07G008470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome