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Lsi07G008600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G008600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich protein 5-like
Genome locationchr07:9727867..9728253
RNA-Seq ExpressionLsi07G008600
SyntenyLsi07G008600
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577050.1 hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1964.89Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGGDTGGE
        M+TY I+LITCG VIA  VIL+CVC +G RKKKK     PTY  + +     P  +       NGGMTILAGAAAGLATAAVVT L+ND GGGGG  GGE
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGGDTGGE

Query:  --GGD-SGGGCGGGCGGGGCGGGGCGGGCGG
          GGD  GGGCGGGC GGGC GGGCGGGCGG
Subjt:  --GGD-SGGGCGGGCGGGGCGGGGCGGGCGG

KGN53550.1 hypothetical protein Csa_015259 [Cucumis sativus]1.3e-1867.42Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFG-SRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTK--NNGGMTILAGAAAGLATAAVVTDLSNDDGGGGGDT
        MKTY I+LI  GSVI  V+IL+CVCKFG SRKKK +T      +P   PQRN  D+ER Q  K  NNGGMTIL GAAAGLATAAVVT LS+  GGGGGD+
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFG-SRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTK--NNGGMTILAGAAAGLATAAVVTDLSNDDGGGGGDT

Query:  GGEGGDSGGGCGGGCGG--GGCGGGGCGGGCG
         G GGD  GG GGGCGG  GGC GGGCGGGCG
Subjt:  GGEGGDSGGGCGGGCGG--GGCGGGGCGGGCG

XP_022931328.1 glycine-rich protein 5-like [Cucurbita moschata]5.8e-1963.16Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGG---DT
        M+TY I+LITCG VIA  VIL+CVC +G RKKKK     PTY  + +     P  +       NGGMTILAGAAAGLATAAVVT L+ND GGGGG   + 
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGG---DT

Query:  GGE--GGDSGGGCGGGCGGGGCGGGGCGGGCGG
        GG+  GGD GGGCGGGC GGGC GGGCGGGCGG
Subjt:  GGE--GGDSGGGCGGGCGGGGCGGGGCGGGCGG

XP_023552868.1 glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo]2.0e-1964.39Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGG--DTG
        M+TY I+LITCG VIA  VIL+CVC +G RKKKK     PTY  + +     P  +       NGGMTILAGAAAGLATAAVVT LSND GGGGG  + G
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGG--DTG

Query:  GE--GGDSGGGCGGGCGGGGCGGGGCGGGCGG
        G+  GGD GGGCGGGC GGGC GGGCGGGCGG
Subjt:  GE--GGDSGGGCGGGCGGGGCGGGGCGGGCGG

XP_038889436.1 acanthoscurrin-1-like [Benincasa hispida]1.2e-2975.97Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDD-GGGGGDTGG
        MKTYGI+LITCGSVIA ++IL CVCKFG RK  K      TY+PN   QRN PDLER QP KNNGG+TILAGAAAGLATAAVVT+L NDD GGGGG  GG
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDD-GGGGGDTGG

Query:  EGGDSGGGCGGGCGGGGCGGGGCGGGCGG
        EGGDS    GGGCGGGGCGGGGCGGGCGG
Subjt:  EGGDSGGGCGGGCGGGGCGGGGCGGGCGG

TrEMBL top hitse value%identityAlignment
A0A0A0KVE1 Uncharacterized protein6.2e-1967.42Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFG-SRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTK--NNGGMTILAGAAAGLATAAVVTDLSNDDGGGGGDT
        MKTY I+LI  GSVI  V+IL+CVCKFG SRKKK +T      +P   PQRN  D+ER Q  K  NNGGMTIL GAAAGLATAAVVT LS+  GGGGGD+
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFG-SRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTK--NNGGMTILAGAAAGLATAAVVTDLSNDDGGGGGDT

Query:  GGEGGDSGGGCGGGCGG--GGCGGGGCGGGCG
         G GGD  GG GGGCGG  GGC GGGCGGGCG
Subjt:  GGEGGDSGGGCGGGCGG--GGCGGGGCGGGCG

A0A2P5CH37 Uncharacterized protein4.1e-1049.29Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVV--------PQRNPPDLERAQPTK-----NNGGMTILAGAAAGLATAAVVTDLS
        MK Y I L+ CGSVIA V+IL C+C  G++KK +     P  + ++         P    PD+ER + TK      +GGM ILAGA A LAT A V  +S
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVV--------PQRNPPDLERAQPTK-----NNGGMTILAGAAAGLATAAVVTDLS

Query:  NDDGGGGGDTG--GEGGDSGGGCGGGCGGGGCGG-GGCGG
        +  GGGGG  G  G GGD GGGC GGC  GGCGG GGCGG
Subjt:  NDDGGGGGDTG--GEGGDSGGGCGGGCGGGGCGG-GGCGG

A0A5J5AB60 Uncharacterized protein3.4e-0951.94Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKN----NGGMTILAGAAAGLATAAVVTDLSNDDGGGGGD
        MK Y I LI CGSV A V++L C+C  G +KK          +    PQ+   D+ER +  K+    +G M ILAGAAA  A AAV+   S+  GG GGD
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKN----NGGMTILAGAAAGLATAAVVTDLSNDDGGGGGD

Query:  TGGEGGD-SGGGCGGGCGGGGCGGGGCGG
        +GG GGD  GGGCGGGC GGGCGGGGCGG
Subjt:  TGGEGGD-SGGGCGGGCGGGGCGGGGCGG

A0A6J1EY84 glycine-rich protein 5-like2.8e-1963.16Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGG---DT
        M+TY I+LITCG VIA  VIL+CVC +G RKKKK     PTY  + +     P  +       NGGMTILAGAAAGLATAAVVT L+ND GGGGG   + 
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGG---DT

Query:  GGE--GGDSGGGCGGGCGGGGCGGGGCGGGCGG
        GG+  GGD GGGCGGGC GGGC GGGCGGGCGG
Subjt:  GGE--GGDSGGGCGGGCGGGGCGGGGCGGGCGG

A0A6J1J409 glycine-rich protein 5-like1.4e-1863.91Show/hide
Query:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGG-----GG
        M+TY I+LIT G VIA  VIL+CVC +G RKKKK     PTY  + +     P  +       NGGMTILAGAAAGLATAAVVT LSND GGG     GG
Subjt:  MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGG-----GG

Query:  DTGGEGGDSGGGCGGGCGGGGCGGGGCGGGCGG
        D GG GGD GGGCGGGC GGGC GGGCGGGCGG
Subjt:  DTGGEGGDSGGGCGGGCGGGGCGGGGCGGGCGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTTATGGCATCATTCTCATAACTTGTGGCTCAGTGATAGCGGTTGTAGTGATTTTATTTTGTGTTTGTAAGTTTGGAAGTCGTAAGAAGAAGAAAGTTACAAT
TACGAAGCCCACATATTTACCCAATGTCGTTCCACAGAGGAACCCTCCTGATCTTGAACGTGCTCAACCTACTAAGAACAATGGTGGCATGACTATTCTTGCTGGAGCAG
CTGCTGGTTTAGCTACTGCCGCCGTGGTTACCGATTTAAGTAATGATGATGGTGGCGGCGGAGGTGATACCGGAGGCGAAGGAGGTGATTCTGGTGGCGGTTGTGGTGGC
GGATGTGGTGGTGGCGGCTGTGGAGGTGGAGGCTGTGGTGGTGGCTGTGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTTATGGCATCATTCTCATAACTTGTGGCTCAGTGATAGCGGTTGTAGTGATTTTATTTTGTGTTTGTAAGTTTGGAAGTCGTAAGAAGAAGAAAGTTACAAT
TACGAAGCCCACATATTTACCCAATGTCGTTCCACAGAGGAACCCTCCTGATCTTGAACGTGCTCAACCTACTAAGAACAATGGTGGCATGACTATTCTTGCTGGAGCAG
CTGCTGGTTTAGCTACTGCCGCCGTGGTTACCGATTTAAGTAATGATGATGGTGGCGGCGGAGGTGATACCGGAGGCGAAGGAGGTGATTCTGGTGGCGGTTGTGGTGGC
GGATGTGGTGGTGGCGGCTGTGGAGGTGGAGGCTGTGGTGGTGGCTGTGGAGGTTGA
Protein sequenceShow/hide protein sequence
MKTYGIILITCGSVIAVVVILFCVCKFGSRKKKKVTITKPTYLPNVVPQRNPPDLERAQPTKNNGGMTILAGAAAGLATAAVVTDLSNDDGGGGGDTGGEGGDSGGGCGG
GCGGGGCGGGGCGGGCGG