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Lsi07G008840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G008840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAnaphase-promoting complex subunit 6
Genome locationchr07:10115000..10115994
RNA-Seq ExpressionLsi07G008840
SyntenyLsi07G008840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034924.1 anaphase-promoting complex subunit 6 [Cucumis melo var. makuwa]1.1e-0667.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

TYK05464.1 anaphase-promoting complex subunit 6 [Cucumis melo var. makuwa]1.1e-0667.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

XP_004146390.1 anaphase-promoting complex subunit 6 isoform X1 [Cucumis sativus]1.1e-0667.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

XP_008442113.1 PREDICTED: anaphase-promoting complex subunit 6 [Cucumis melo]1.1e-0667.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

XP_031740071.1 anaphase-promoting complex subunit 6 isoform X2 [Cucumis sativus]1.1e-0667.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

TrEMBL top hitse value%identityAlignment
A0A0A0L2G5 TPR_REGION domain-containing protein5.3e-0767.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

A0A1S3B4Z0 anaphase-promoting complex subunit 65.3e-0767.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

A0A5A7SUI9 Anaphase-promoting complex subunit 65.3e-0767.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

A0A5D3C2E8 Anaphase-promoting complex subunit 65.3e-0767.39Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM SLALM+ECQNGMDPKVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

A0A7J7L201 Uncharacterized protein2.7e-0635.11Show/hide
Query:  REEEIENLRGLVRDCVSNHLYSSPI----SSLTMSPLSLRILPTFTSSRRASFLDPIFLVGKVL--PPQCLQSQLLLLHE-------------------Y
        +EE ++ LRG+VRDCVS HLYSS I         +P  +   P F  S+   F DP      +     +CL    +L  E                   Y
Subjt:  REEEIENLRGLVRDCVSNHLYSSPI----SSLTMSPLSLRILPTFTSSRRASFLDPIFLVGKVL--PPQCLQSQLLLLHE-------------------Y

Query:  LMVALWLKSDDHFCTEMSSLALMEECQNGMD
           ALW+K DD FCT+M + AL++EC+NG+D
Subjt:  LMVALWLKSDDHFCTEMSSLALMEECQNGMD

SwissProt top hitse value%identityAlignment
B3DNN5 Anaphase-promoting complex subunit 61.8e-0758.7Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM ++ALM+ECQNG+D KVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

B3DNN5 Anaphase-promoting complex subunit 69.1e-0480Show/hide
Query:  REEEIENLRGLVRDCVSNHLYSSPI
        REEEIE +RG+VRDCVS HLYSS I
Subjt:  REEEIENLRGLVRDCVSNHLYSSPI

Arabidopsis top hitse value%identityAlignment
AT1G78770.1 anaphase promoting complex 61.3e-0858.7Show/hide
Query:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE
        LQ        Y   ALWLK DD FCTEM ++ALM+ECQNG+D KVE
Subjt:  LQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDPKVE

AT1G78770.1 anaphase promoting complex 66.5e-0580Show/hide
Query:  REEEIENLRGLVRDCVSNHLYSSPI
        REEEIE +RG+VRDCVS HLYSS I
Subjt:  REEEIENLRGLVRDCVSNHLYSSPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACGAGGGAGGAAGAAATTGAGAACCTCCGAGGCTTAGTAAGGGACTGCGTGAGCAATCATCTCTACTCCTCCCCCATTTCTTCGCTGACAATGTCGCCGCTTTC
ACTGAGGATCCTGCCGACATTTACATCCAGCCGCAGGGCCTCTTTCTTAGACCCCATTTTCCTCGTGGGCAAAGTTTTACCTCCTCAGTGCCTCCAATCTCAATTACTTT
TGCTCCATGAATATCTAATGGTAGCTTTGTGGCTGAAATCAGACGATCATTTTTGCACTGAAATGTCAAGTTTAGCTCTTATGGAGGAATGCCAAAATGGGATGGATCCA
AAAGTAGAGCCTTGGCAAAACCTTCTTTCCTTCGACTACTCCTTGGGTTTGAAGAATGGGCAGCCAACTGAAGCCGCTAAATCTTTCTCATTGTCTTTGGTTTGGGATTT
TGAGGCAGTTTTCCCCTTCAAAAGACCTCCAAATAGCTCAGCTGGATCGTAG
mRNA sequenceShow/hide mRNA sequence
AATTATCTTCTGTTACAAAAAATCTCTTTGCGCCATGAAAATCCATGAGAACGAGGGAGGAAGAAATTGAGAACCTCCGAGGCTTAGTAAGGGACTGCGTGAGCAATCAT
CTCTACTCCTCCCCCATTTCTTCGCTGACAATGTCGCCGCTTTCACTGAGGATCCTGCCGACATTTACATCCAGCCGCAGGGCCTCTTTCTTAGACCCCATTTTCCTCGT
GGGCAAAGTTTTACCTCCTCAGTGCCTCCAATCTCAATTACTTTTGCTCCATGAATATCTAATGGTAGCTTTGTGGCTGAAATCAGACGATCATTTTTGCACTGAAATGT
CAAGTTTAGCTCTTATGGAGGAATGCCAAAATGGGATGGATCCAAAAGTAGAGCCTTGGCAAAACCTTCTTTCCTTCGACTACTCCTTGGGTTTGAAGAATGGGCAGCCA
ACTGAAGCCGCTAAATCTTTCTCATTGTCTTTGGTTTGGGATTTTGAGGCAGTTTTCCCCTTCAAAAGACCTCCAAATAGCTCAGCTGGATCGTAG
Protein sequenceShow/hide protein sequence
MRTREEEIENLRGLVRDCVSNHLYSSPISSLTMSPLSLRILPTFTSSRRASFLDPIFLVGKVLPPQCLQSQLLLLHEYLMVALWLKSDDHFCTEMSSLALMEECQNGMDP
KVEPWQNLLSFDYSLGLKNGQPTEAAKSFSLSLVWDFEAVFPFKRPPNSSAGS