; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G008890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G008890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRpr2 domain-containing protein
Genome locationchr07:10181780..10183751
RNA-Seq ExpressionLsi07G008890
SyntenyLsi07G008890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044832.1 Rpr2 domain-containing protein [Cucumis melo var. makuwa]4.4e-7262.35Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD
        CET+LQPGSNC IRIEKNN K+  R  K S++TQNVV YYCHYCSCRNIKRGTPKGHMK LY T+ VSKVKSV +KDGKECEN+ILTMDAP   P TT D
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD

Query:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT
         LTIDTPAIP                PP E                                  D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+T
Subjt:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT

Query:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        EPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

XP_004146565.1 uncharacterized protein LOC101220608 [Cucumis sativus]2.0e-7262.35Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD
        CETILQPGSNC+IRIEKN  K+ RR  K S+LTQNVV YYCHYCSCRNIKRGTPKGHMK LY T+ VSKVKSV +KDGKECEN+I TMD PKI P TT D
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD

Query:  SLTIDTPAIP--------------------------------------------------PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT
         LTIDTPAIP                                                      D PT+DAPATP T+TGMTLL+SKRRKRKKP SKNQT
Subjt:  SLTIDTPAIP--------------------------------------------------PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT

Query:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        EPESCS  T+ G+ +EGTSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

XP_008452026.1 PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo]2.0e-7262.35Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD
        CET+LQPGSNC IRIEKNN K+ RR  K S++TQNVV YYCHYCSCRNIKRGTPKGHMK LY T+ VSKVKSV +KDGKECEN+ILT+DAP   P TT D
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD

Query:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT
         LTIDTPAIP                PP E                                  D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+T
Subjt:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT

Query:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        EPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

XP_038906436.1 uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida]2.9e-7159.78Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEI--------LTMDAPK
        CETILQPGSNCSIRIEKNN KR R+ NKCS+LTQNVV YYCHYCSCRNIKRGTPKGHMK LY T+FVSK+KSV ++DGKECEN+I        LT+D P 
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEI--------LTMDAPK

Query:  ILPSTTRDSLTIDTPAIPPPPE----------------------------------------------------------DTPTIDAPATPPTMTGMTLL
        I PSTT +   IDT AIPP  +                                                          D PT+DAPATPPTMTG+TLL
Subjt:  ILPSTTRDSLTIDTPAIPPPPE----------------------------------------------------------DTPTIDAPATPPTMTGMTLL

Query:  NSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        +SKRRKRKKP SKNQTEPES SA T  GDKT G SKR+RNRKSWTSLK+IA+R+EE GKQNVAVLAIPFSL
Subjt:  NSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

XP_038906437.1 uncharacterized protein LOC120092350 isoform X2 [Benincasa hispida]2.9e-7159.78Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEI--------LTMDAPK
        CETILQPGSNCSIRIEKNN KR R+ NKCS+LTQNVV YYCHYCSCRNIKRGTPKGHMK LY T+FVSK+KSV ++DGKECEN+I        LT+D P 
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEI--------LTMDAPK

Query:  ILPSTTRDSLTIDTPAIPPPPE----------------------------------------------------------DTPTIDAPATPPTMTGMTLL
        I PSTT +   IDT AIPP  +                                                          D PT+DAPATPPTMTG+TLL
Subjt:  ILPSTTRDSLTIDTPAIPPPPE----------------------------------------------------------DTPTIDAPATPPTMTGMTLL

Query:  NSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        +SKRRKRKKP SKNQTEPES SA T  GDKT G SKR+RNRKSWTSLK+IA+R+EE GKQNVAVLAIPFSL
Subjt:  NSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

TrEMBL top hitse value%identityAlignment
A0A0A0KUP1 Uncharacterized protein9.6e-7362.35Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD
        CETILQPGSNC+IRIEKN  K+ RR  K S+LTQNVV YYCHYCSCRNIKRGTPKGHMK LY T+ VSKVKSV +KDGKECEN+I TMD PKI P TT D
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD

Query:  SLTIDTPAIP--------------------------------------------------PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT
         LTIDTPAIP                                                      D PT+DAPATP T+TGMTLL+SKRRKRKKP SKNQT
Subjt:  SLTIDTPAIP--------------------------------------------------PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT

Query:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        EPESCS  T+ G+ +EGTSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A1S3BU13 uncharacterized protein LOC1034931579.6e-7362.35Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD
        CET+LQPGSNC IRIEKNN K+ RR  K S++TQNVV YYCHYCSCRNIKRGTPKGHMK LY T+ VSKVKSV +KDGKECEN+ILT+DAP   P TT D
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD

Query:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT
         LTIDTPAIP                PP E                                  D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+T
Subjt:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT

Query:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        EPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A5A7TNC0 Rpr2 domain-containing protein2.1e-7262.35Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD
        CET+LQPGSNC IRIEKNN K+  R  K S++TQNVV YYCHYCSCRNIKRGTPKGHMK LY T+ VSKVKSV +KDGKECEN+ILTMDAP   P TT D
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD

Query:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT
         LTIDTPAIP                PP E                                  D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+T
Subjt:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT

Query:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        EPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A5D3CYJ3 Rpr2 domain-containing protein9.6e-7362.35Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD
        CET+LQPGSNC IRIEKNN K+ RR  K S++TQNVV YYCHYCSCRNIKRGTPKGHMK LY T+ VSKVKSV +KDGKECEN+ILT+DAP   P TT D
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRD

Query:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT
         LTIDTPAIP                PP E                                  D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+T
Subjt:  SLTIDTPAIP----------------PPPE----------------------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQT

Query:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
        EPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  EPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A6J1J5I6 uncharacterized protein LOC1114827978.1e-6456.6Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECE-------NEILTMDAPKI
        CETILQPGSNCSIRIEKNN KR RR+ KCS+  QN V YYCH+CSCRNIKRGTPKGHMK LYD  F  +VK VD+KDGKECE        EILT+DAPKI
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECE-------NEILTMDAPKI

Query:  -----LPST--------------TRDSLTIDTPAIPPPPEDT---------------------------------PTIDAPATPPTMTGMTLLNSKRRKR
             +P T              T+  L I++PA P     T                                 PT+DAPATP T TG+TLL+SK+RKR
Subjt:  -----LPST--------------TRDSLTIDTPAIPPPPEDT---------------------------------PTIDAPATPPTMTGMTLLNSKRRKR

Query:  KKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQ-NVAVLAIPFSL
         KP SKNQTEP SCSA TADGD++EGTSKR R RKSWTSLK++A+ NE+SGKQ N+A LAIPFSL
Subjt:  KKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQ-NVAVLAIPFSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41270.1 CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).1.6e-1935.71Show/hide
Query:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSD-----LTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILP
        CETIL+PG NC++RIEK +    ++RN+C         QN VVY+C++CS RN+KRGT KG MK LY  K     +S   K  KE       M  P+ + 
Subjt:  CETILQPGSNCSIRIEKNNVKRHRRRNKCSD-----LTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILP

Query:  STTRDSLTIDTPAIPPPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQN
        S    S         P       ++  +   T   M L   + R+ +KP SK  +EP+S        +KT G S +R+ +  WTS+K+IA+ N+ S   N
Subjt:  STTRDSLTIDTPAIPPPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQN

Query:  VAVLAIPFSL
             IPF L
Subjt:  VAVLAIPFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACTGGTATGAGCTATCAAGAAACTGGAATACTAATTGGTGCTGGAGTGGATGAAAGAAGCTGTAACTTTTGTAGCTCTGGTGATCTCAGTTGGCTTTGCCTGAA
TGATTGCAGGAGCTCTAAAAAGAGAGCTTTTGGAGGCGTGCATATCCCTTCTGCAATCTCTCAAGAGAAAGCCAGGAAGCTAAGTGCAATCAATTTTGTTATTTGGAGCA
TGTGTGAAACAATTCTTCAACCTGGTTCTAACTGCTCAATACGAATAGAGAAGAATAATGTCAAGAGACATCGGAGACGCAACAAATGTAGTGATTTGACACAGAACGTT
GTGGTGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACCCCTAAAGGTCATATGAAAGGGCTTTATGACACGAAGTTTGTAAGCAAAGTGAAATCTGT
GGATCTCAAGGATGGTAAAGAATGTGAAAACGAGATTCTTACCATGGATGCTCCTAAAATTCTTCCTTCTACCACCAGAGACAGTCTAACTATTGATACTCCTGCAATTC
CTCCTCCACCTGAGGACACTCCCACTATAGATGCTCCTGCAACTCCTCCCACCATGACCGGAATGACTTTGTTGAATTCAAAGAGGAGAAAGAGGAAGAAACCGTTATCG
AAGAATCAAACTGAACCTGAAAGTTGTTCGGCTTCAACAGCAGATGGGGACAAAACTGAAGGCACATCCAAGAGGAGGCGTAATAGAAAATCATGGACAAGTTTGAAGGA
CATTGCTAAGAGGAATGAAGAGAGTGGTAAACAAAACGTGGCTGTATTGGCAATTCCATTCTCCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACTGGTATGAGCTATCAAGAAACTGGAATACTAATTGGTGCTGGAGTGGATGAAAGAAGCTGTAACTTTTGTAGCTCTGGTGATCTCAGTTGGCTTTGCCTGAA
TGATTGCAGGAGCTCTAAAAAGAGAGCTTTTGGAGGCGTGCATATCCCTTCTGCAATCTCTCAAGAGAAAGCCAGGAAGCTAAGTGCAATCAATTTTGTTATTTGGAGCA
TGTGTGAAACAATTCTTCAACCTGGTTCTAACTGCTCAATACGAATAGAGAAGAATAATGTCAAGAGACATCGGAGACGCAACAAATGTAGTGATTTGACACAGAACGTT
GTGGTGTATTATTGCCACTACTGCTCATGTAGGAACATAAAGAGAGGGACCCCTAAAGGTCATATGAAAGGGCTTTATGACACGAAGTTTGTAAGCAAAGTGAAATCTGT
GGATCTCAAGGATGGTAAAGAATGTGAAAACGAGATTCTTACCATGGATGCTCCTAAAATTCTTCCTTCTACCACCAGAGACAGTCTAACTATTGATACTCCTGCAATTC
CTCCTCCACCTGAGGACACTCCCACTATAGATGCTCCTGCAACTCCTCCCACCATGACCGGAATGACTTTGTTGAATTCAAAGAGGAGAAAGAGGAAGAAACCGTTATCG
AAGAATCAAACTGAACCTGAAAGTTGTTCGGCTTCAACAGCAGATGGGGACAAAACTGAAGGCACATCCAAGAGGAGGCGTAATAGAAAATCATGGACAAGTTTGAAGGA
CATTGCTAAGAGGAATGAAGAGAGTGGTAAACAAAACGTGGCTGTATTGGCAATTCCATTCTCCTTATGACAAGACACTTTCTAAAGTCCAAATGGGCAACTTGTTTTGT
AAATTTATAGGCGATTCTCATTAGTGTTTGTGCGAGCTTATTATTGAGTCACATTTATATAATGAAGAATTAATTTTGTTAAACCTTCTGTTCTCTTTCAGCATTTGTTT
GGTTTTCAAATGGGATGATTTGAATTTGCCATTGTTCAGAGTAAATCTTCATACTATTGAACTTTGTCCATCGTTAACGATGCAATGTTACCCTTACCATAAATAAA
Protein sequenceShow/hide protein sequence
MNTGMSYQETGILIGAGVDERSCNFCSSGDLSWLCLNDCRSSKKRAFGGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNV
VVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIPPPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLS
KNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL