; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G009020 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009020
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Genome locationchr07:10352539..10357529
RNA-Seq ExpressionLsi07G009020
SyntenyLsi07G009020
Gene Ontology termsGO:0015995 - chlorophyll biosynthetic process (biological process)
GO:0016117 - carotenoid biosynthetic process (biological process)
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (biological process)
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003526 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR020555 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
IPR036571 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600551.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.0e-10384.32Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MA+P P F S T  T   QS SLS Y  SFPR NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS LLG
Subjt:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

XP_004146533.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis sativus]4.0e-10787.98Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFT---AVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIT
        MA+ AP F SP A T   QS SLS Y PSFP   FT   + SSSSSLPSFR+NSAAS SV+STTA+KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFT---AVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIT

Query:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP
        IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADP
Subjt:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP

Query:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        SVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

XP_008452007.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis melo]4.9e-11391.3Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPH
        MA+ APFF SP A T   QSPSLSFY PSFPRR FT +SSSSSLPSFR+NSA S SV+STTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPH
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        NLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMSR

XP_023548820.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]7.8e-10383.9Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MA+P P F S T  T   QS SLS Y  SFPR NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMH+AGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

XP_038877996.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Benincasa hispida]7.0e-11292.58Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAV-SSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIP
        MA+ APFF SPTA T   QS SLSFY PSF RRNFTAV SSSSSLPSFR+ SAASPSVA TTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IP
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAV-SSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIP

Query:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV
        HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG DPSV
Subjt:  HDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSV

Query:  VNLKAKTHEKVDSLGENRSIAAHTVVLLM
        VNLKAKTHEKVDSLGENRSIAAHTVVLLM
Subjt:  VNLKAKTHEKVDSLGENRSIAAHTVVLLM

TrEMBL top hitse value%identityAlignment
A0A0A0KWV1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.9e-10787.98Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFT---AVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIT
        MA+ AP F SP A T   QS SLS Y PSFP   FT   + SSSSSLPSFR+NSAAS SV+STTA+KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFT---AVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGIT

Query:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP
        IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADP
Subjt:  IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADP

Query:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        SVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

A0A1S3BTZ8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2.4e-11391.3Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPH
        MA+ APFF SP A T   QSPSLSFY PSFPRR FT +SSSSSLPSFR+NSA S SV+STTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPH
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        NLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMSR

A0A5D3D287 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2.4e-11391.3Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPH
        MA+ APFF SP A T   QSPSLSFY PSFPRR FT +SSSSSLPSFR+NSA S SV+STTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPH
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPH

Query:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
        DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV
Subjt:  DRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVV

Query:  NLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        NLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  NLKAKTHEKVDSLGENRSIAAHTVVLLMSR

A0A6J1FX89 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.4e-10283.9Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MA+P P F S T  T   QS SLS Y  SFPR NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLG
Subjt:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

A0A6J1J2X8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2.4e-10283.9Show/hide
Query:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG
        MA+P P F S T  T   QS SLS Y  SFPR NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIG
Subjt:  MAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIG

Query:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG
        GI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS LLG
Subjt:  GITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG

Query:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        AD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

SwissProt top hitse value%identityAlignment
B8GQ78 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase7.2e-4350.97Show/hide
Query:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ
        R+GHG+D+H  + G  +++GG+ IPH +   AHSDGDVL+H + DA+LGA  L DIG+ FPD+DP +KGA S V ++  V L+HE GY +GN+DAT+I Q
Subjt:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMS
         PK++PH EA+RANL++ LG     VN+KA T E++   G    IAAH V L+ S
Subjt:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMS

Q1LLZ4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase9.4e-4353.21Show/hide
Query:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ
        R+G G+D+H L PG  LI+GG+ IPHDRG   HSD D LLH V DA+ GA  L DIG+ FPD+DP + GA S V ++EAVR + EAGY+IGN+DAT+I Q
Subjt:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        +PKL+PH   + ANL+E LG   +  N+KAKT+EK+   G+   I A   VL+  R
Subjt:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

Q6EPN6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic2.5e-8076.14Show/hide
Query:  SSSSSLPSFRLN-----SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        S+S + PS RL      +AA+       AV +      LPFRVGHGFDLHRLEPG PLIIGGI IPHDRGC+AHSDGDVLLHCVVDAILGALGLPDIGQI
Subjt:  SSSSSLPSFRLN-----SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        FPDSDP+WKGA SSVF++EAV+LMHEAGY++GNLDATLILQ+PK+SP KE IR+NL +LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLM +
Subjt:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

Q9CAK8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.3e-8787.22Show/hide
Query:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI
        SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFI
Subjt:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI

Query:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM +
Subjt:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

Q9M4W3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.1e-8375.35Show/hide
Query:  RRNF--TAVSSSSSLPSF--------RLNSAASPSVASTTAVKSD------SPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLH
        R NF  + V  S + PS+        R  S    + AS  AV+++      +PSK L FRVGHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLH
Subjt:  RRNF--TAVSSSSSLPSF--------RLNSAASPSVASTTAVKSD------SPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLH

Query:  CVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGE
        CVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLM EAGY++GNLDATLILQRPK+SPHKEAIR NL +LLGADP VVNLKAKTHEKVDSLGE
Subjt:  CVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGE

Query:  NRSIAAHTVVLLMSR
        NRSIAAHTVVLLM +
Subjt:  NRSIAAHTVVLLMSR

Arabidopsis top hitse value%identityAlignment
AT1G63970.1 isoprenoid F8.9e-8987.22Show/hide
Query:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI
        SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFI
Subjt:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI

Query:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM +
Subjt:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

AT1G63970.2 isoprenoid F2.3e-8182.78Show/hide
Query:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI
        SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD        VDAILGALGLPDIGQIFPDSDPKWKGA SSVFI
Subjt:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI

Query:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM +
Subjt:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTGTACCCTACACGACTGACGACACACTCCCTACGCGCCAACGACATAATTCAACCACCACACAAACAACCTCTCCTTCCTCTGCCCCTTTCAATGGCCATCCC
CGCCCCTTTCTTCGTCTCTCCAACCGCCGTCACTAACCCCCAACAATCCCCTTCCCTTTCTTTTTATTCTCCTTCCTTTCCCAGAAGAAATTTCACTGCTGTTTCCTCCT
CCTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGTCCACTACCGCCGTCAAATCCGATTCTCCGTCCAAAACCTTGCCATTTCGGGTCGGA
CATGGCTTCGATCTTCATAGGTTGGAACCTGGGTACCCTTTGATTATTGGGGGAATTACCATTCCCCATGATAGAGGCTGCGAAGCTCATTCCGATGGGGATGTTCTCCT
ACATTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCCATCGTCCGTTTTCATCA
AAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCA
AACCTCTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACGCATGAGAAAGTCGACAGCCTTGGCGAAAACAGAAGCATTGCTGCTCATACTGT
GGTCCTCTTGATGAGCAGATAG
mRNA sequenceShow/hide mRNA sequence
GCATGTTATTGTACCCTACACGACTGACGACACACTCCCTACGCGCCAACGACATAATTCAACCACCACACAAACAACCTCTCCTTCCTCTGCCCCTTTCAATGGCCATC
CCCGCCCCTTTCTTCGTCTCTCCAACCGCCGTCACTAACCCCCAACAATCCCCTTCCCTTTCTTTTTATTCTCCTTCCTTTCCCAGAAGAAATTTCACTGCTGTTTCCTC
CTCCTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGTCCACTACCGCCGTCAAATCCGATTCTCCGTCCAAAACCTTGCCATTTCGGGTCG
GACATGGCTTCGATCTTCATAGGTTGGAACCTGGGTACCCTTTGATTATTGGGGGAATTACCATTCCCCATGATAGAGGCTGCGAAGCTCATTCCGATGGGGATGTTCTC
CTACATTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCCATCGTCCGTTTTCAT
CAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAG
CAAACCTCTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACGCATGAGAAAGTCGACAGCCTTGGCGAAAACAGAAGCATTGCTGCTCATACT
GTGGTCCTCTTGATGAGCAGATAGAAGTCCTGCCCTGCCCTCCCATTAGTGCTGCTGTGCAAGCGTAATAACAACAGTGCCCCATTTTAAGTGAAATATGCTTTATTGTC
AATACTTTGAATTTTCCCCCGCCCCCTCCACAGTAATCTGCAAAGTGCAAACGATTGTAAGTTGGTTGTTGCATTAAACGTTTTAATCATTCAACAACATGAAAAAGAAA
ATGTTTTGGTGGGAGAATATTAGAAATTGCCTATAATGATTGCTTTTCTTCTTATTTTTCCTTTCCTCATTTTCAATTTTACTTGATTAAACTCTAAACTTGAAGTACAT
AAATTCCTATGTAATTGTTGAGTCACTATCTTTTGGAAGATTTCTAACTAGG
Protein sequenceShow/hide protein sequence
MLLYPTRLTTHSLRANDIIQPPHKQPLLPLPLSMAIPAPFFVSPTAVTNPQQSPSLSFYSPSFPRRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVG
HGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA
NLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR