; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G009050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWRKY domain-containing protein
Genome locationchr07:10414641..10419447
RNA-Seq ExpressionLsi07G009050
SyntenyLsi07G009050
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452004.1 PREDICTED: probable WRKY transcription factor 43 [Cucumis melo]3.6e-5782.88Show/hide
Query:  MGD-YYDNVVN--IGGIKEGDI---GGGKNNNMNN---KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNV
        MGD  YDN  N  IGG+KEGDI   GG  +NN NN   KG++VMGKRRSA+ +PRIAFQTRS EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNV
Subjt:  MGD-YYDNVVN--IGGIKEGDI---GGGKNNNMNN---KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNV

Query:  KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Subjt:  KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

XP_011653192.1 probable WRKY transcription factor 24 [Cucumis sativus]4.7e-5784.03Show/hide
Query:  MGDYYDNVVNIGGIKEGD--IGGGKNNNMNN-----KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKK
        MGD  +NVV IGG+KEGD  IGGG NNN NN     KGK+VMGK RS I +PRIAFQT+S EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNVKK
Subjt:  MGDYYDNVVNIGGIKEGD--IGGGKNNNMNN-----KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKK

Query:  QIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        QIQRHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Subjt:  QIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

XP_022136661.1 probable WRKY transcription factor 24 [Momordica charantia]2.2e-5484.73Show/hide
Query:  GIKEGDIGGGK------NNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVV
        GIK GD  GG       NN   NKGK++MGKR S+ + PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVV
Subjt:  GIKEGDIGGGK------NNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVV

Query:  TTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        TTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
Subjt:  TTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

XP_022983025.1 probable WRKY transcription factor 43 [Cucurbita maxima]1.2e-4977.7Show/hide
Query:  AMGDY-YDNVVNIGGIKEGDIGGGKNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH
        AMGDY Y N  ++       + GGK     NKGK+ M KR +    PR+AFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH
Subjt:  AMGDY-YDNVVNIGGIKEGDIGGGKNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH

Query:  SKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        SKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Subjt:  SKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

XP_038888280.1 probable WRKY transcription factor 24 [Benincasa hispida]5.5e-5887.94Show/hide
Query:  MGDYYDNVVNIGGIK-EGDIGGGKNNNMNNK---GKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQ
        MGD YDNV  +GGI  EG+I GGKNNN NNK   GK+VM KRR+ +MAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQ
Subjt:  MGDYYDNVVNIGGIK-EGDIGGGKNNNMNNK---GKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQ

Query:  RHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        RHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
Subjt:  RHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

TrEMBL top hitse value%identityAlignment
A0A0A0KZP6 WRKY domain-containing protein2.3e-5784.03Show/hide
Query:  MGDYYDNVVNIGGIKEGD--IGGGKNNNMNN-----KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKK
        MGD  +NVV IGG+KEGD  IGGG NNN NN     KGK+VMGK RS I +PRIAFQT+S EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNVKK
Subjt:  MGDYYDNVVNIGGIKEGD--IGGGKNNNMNN-----KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKK

Query:  QIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        QIQRHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Subjt:  QIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

A0A1S3BSW1 probable WRKY transcription factor 431.7e-5782.88Show/hide
Query:  MGD-YYDNVVN--IGGIKEGDI---GGGKNNNMNN---KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNV
        MGD  YDN  N  IGG+KEGDI   GG  +NN NN   KG++VMGKRRSA+ +PRIAFQTRS EDVLDDGYRWRKYGQKAVKHS HPRSYYRCTHHTCNV
Subjt:  MGD-YYDNVVN--IGGIKEGDI---GGGKNNNMNN---KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNV

Query:  KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Subjt:  KKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

A0A6J1C449 probable WRKY transcription factor 241.1e-5484.73Show/hide
Query:  GIKEGDIGGGK------NNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVV
        GIK GD  GG       NN   NKGK++MGKR S+ + PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVV
Subjt:  GIKEGDIGGGK------NNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVV

Query:  TTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        TTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
Subjt:  TTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

A0A6J1FW26 probable WRKY transcription factor 435.1e-4975.89Show/hide
Query:  VAAMGD-YYDNVVNIGGIKEGDIGGGKNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQ
        + AMGD  Y N  ++       + GGK     NKGK+ MGKR +    PR+AFQTRSAEDVLDDGYRWRKYGQKAVKHST+PRSYYRCTHHTCNVKKQIQ
Subjt:  VAAMGD-YYDNVVNIGGIKEGDIGGGKNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQ

Query:  RHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        RHSKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Subjt:  RHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

A0A6J1J4I8 probable WRKY transcription factor 436.0e-5077.7Show/hide
Query:  AMGDY-YDNVVNIGGIKEGDIGGGKNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH
        AMGDY Y N  ++       + GGK     NKGK+ M KR +    PR+AFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH
Subjt:  AMGDY-YDNVVNIGGIKEGDIGGGKNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRH

Query:  SKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI
        SKDPTIVVTTYEGIHNHPSEKLMETL+PLLKQLQFLSGI
Subjt:  SKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI

SwissProt top hitse value%identityAlignment
Q8GY11 Probable WRKY transcription factor 436.8e-3566.99Show/hide
Query:  VVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQ
        +V   R   +  PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +PRSYYRCT H CNVKKQ+QR SK+ +IV TTYEGIHNHP E+LM+TL+PLL QLQ
Subjt:  VVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQ

Query:  FLS
        FLS
Subjt:  FLS

Q8VWQ4 Probable WRKY transcription factor 564.4e-4266.94Show/hide
Query:  GDIGGGKNNNMNNKG---KVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIH
        G++GG  +NN NN         GK +  +   RIAF TRS +DVLDDGYRWRKYGQK+VK++ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+H
Subjt:  GDIGGGKNNNMNNKG---KVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIH

Query:  NHPSEKLMETLSPLLKQLQFLSGI
        NHP EKLMETLSPLL+QLQFLS +
Subjt:  NHPSEKLMETLSPLLKQLQFLSGI

Q93WY4 Probable WRKY transcription factor 124.9e-2553.04Show/hide
Query:  DIGGGKNNNMNN-------------KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI
        + GGG NN+ ++             K KV   K R  +  PR  FQT+S  DVLDDGY+WRKYGQK VK+S HPRSYYRCTH+ C VKK+++R S+D  +
Subjt:  DIGGGKNNNMNN-------------KGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTI

Query:  VVTTYEGIHNH-PSE
        V+TTYEG HNH PS+
Subjt:  VVTTYEGIHNH-PSE

Q9FFS3 Probable WRKY transcription factor 242.0e-4271.68Show/hide
Query:  KNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLME
        +N+ +  KGK +  KR   +  PRIAF TRS +DVLDDGYRWRKYGQK+VKH+ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+HNHP EKLME
Subjt:  KNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLME

Query:  TLSPLLKQLQFLS
        TL+PLL+QLQFLS
Subjt:  TLSPLLKQLQFLS

Q9FYA2 Probable WRKY transcription factor 758.1e-2864.44Show/hide
Query:  RIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS
        R AFQTRS  D+LDDGYRWRKYGQKAVK++  PRSYYRCT+  CNVKKQ+QR + D  +VVTTYEG+H+HP EK  E    +L Q+Q  S
Subjt:  RIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS

Arabidopsis top hitse value%identityAlignment
AT1G64000.1 WRKY DNA-binding protein 563.1e-4366.94Show/hide
Query:  GDIGGGKNNNMNNKG---KVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIH
        G++GG  +NN NN         GK +  +   RIAF TRS +DVLDDGYRWRKYGQK+VK++ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+H
Subjt:  GDIGGGKNNNMNNKG---KVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIH

Query:  NHPSEKLMETLSPLLKQLQFLSGI
        NHP EKLMETLSPLL+QLQFLS +
Subjt:  NHPSEKLMETLSPLLKQLQFLSGI

AT2G46130.1 WRKY DNA-binding protein 434.9e-3666.99Show/hide
Query:  VVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQ
        +V   R   +  PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +PRSYYRCT H CNVKKQ+QR SK+ +IV TTYEGIHNHP E+LM+TL+PLL QLQ
Subjt:  VVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQ

Query:  FLS
        FLS
Subjt:  FLS

AT2G46130.2 WRKY DNA-binding protein 431.2e-3169.23Show/hide
Query:  PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS
        PR +F+T+S  D+LDDGYRWRKYGQK+VK+S +P    RCT H CNVKKQ+QR SK+ +IV TTYEGIHNHP E+LM+TL+PLL QLQFLS
Subjt:  PRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS

AT5G13080.1 WRKY DNA-binding protein 755.7e-2964.44Show/hide
Query:  RIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS
        R AFQTRS  D+LDDGYRWRKYGQKAVK++  PRSYYRCT+  CNVKKQ+QR + D  +VVTTYEG+H+HP EK  E    +L Q+Q  S
Subjt:  RIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLS

AT5G41570.1 WRKY DNA-binding protein 241.4e-4371.68Show/hide
Query:  KNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLME
        +N+ +  KGK +  KR   +  PRIAF TRS +DVLDDGYRWRKYGQK+VKH+ HPRSYYRCT+HTCNVKKQ+QR +KDP +VVTTYEG+HNHP EKLME
Subjt:  KNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKDPTIVVTTYEGIHNHPSEKLME

Query:  TLSPLLKQLQFLS
        TL+PLL+QLQFLS
Subjt:  TLSPLLKQLQFLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGGATCAAGTTGTTGCAGCAATGGGAGATTATTATGATAATGTTGTGAATATTGGAGGAATAAAAGAGGGAGATATTGGTGGAGGGAAGAATAATAATATGAA
TAATAAAGGAAAAGTGGTGATGGGTAAAAGAAGAAGTGCAATAATGGCTCCAAGGATTGCTTTTCAGACAAGAAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGA
GGAAATATGGTCAGAAGGCAGTCAAACATAGCACCCATCCTAGGAGCTATTACCGGTGTACACATCACACATGTAACGTTAAGAAACAAATTCAAAGGCATTCAAAGGAT
CCAACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAGAAATTAATGGAGACTCTAAGCCCTCTTCTCAAGCAATTGCAGTTCCTTTCTGGCATTTA
G
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGGATCAAGTTGTTGCAGCAATGGGAGATTATTATGATAATGTTGTGAATATTGGAGGAATAAAAGAGGGAGATATTGGTGGAGGGAAGAATAATAATATGAA
TAATAAAGGAAAAGTGGTGATGGGTAAAAGAAGAAGTGCAATAATGGCTCCAAGGATTGCTTTTCAGACAAGAAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGA
GGAAATATGGTCAGAAGGCAGTCAAACATAGCACCCATCCTAGGAGCTATTACCGGTGTACACATCACACATGTAACGTTAAGAAACAAATTCAAAGGCATTCAAAGGAT
CCAACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAGAAATTAATGGAGACTCTAAGCCCTCTTCTCAAGCAATTGCAGTTCCTTTCTGGCATTTA
GAATCTAATTTTTCTTTTCCATTTCATCAACTTTTTCTGTGTATGTATTTCTATTAATCTTTCTTCTCCCAATGCCACTGGAAAAGCCTAGTCGTCTTAAGGTTGAGAAA
GAAATCACACCATCATTTTCTTCTCTAATTAATGGCTTGAGAAGTCTATTGTAATATAC
Protein sequenceShow/hide protein sequence
MNKDQVVAAMGDYYDNVVNIGGIKEGDIGGGKNNNMNNKGKVVMGKRRSAIMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSTHPRSYYRCTHHTCNVKKQIQRHSKD
PTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI