; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G009290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLipid transfer protein
Genome locationchr07:11260202..11260504
RNA-Seq ExpressionLsi07G009290
SyntenyLsi07G009290
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064159.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]3.8e-3479.41Show/hide
Query:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSISS LCLS ++MA VM VALITGAR ADAVNCNP EM+ CLPA ESS PPTAECCEK+KEQEPCFC YLKSP  K YLESPNAKKI+SSCG+  P
Subjt:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

KAB2611859.1 non-specific lipid-transfer protein 2-like [Pyrus ussuriensis x Pyrus communis]2.0e-2253.61Show/hide
Query:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        + +SS  L+  +M  ++VAL   AR  +AV C+P+E+  CL A  S APP+A CCEK+KEQ+PCFC Y+K+P LKPY+++PNAKK++S+CGV FP C
Subjt:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

KAG6581740.1 hypothetical protein SDJN03_21742, partial [Cucurbita argyrosperma subsp. sororia]7.0e-2872.83Show/hide
Query:  LCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        LCL V V  M MVAL+TG   A+AV C+PMEM+ACLPA +SS PPTAECC+KVK+QE C C YLKSP LKPYLESPNAKKI+SSCGV  PTC
Subjt:  LCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

KGN53815.1 hypothetical protein Csa_014873 [Cucumis sativus]7.0e-3683.33Show/hide
Query:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSIS SLCLSV VMAMVM VALITGA  ADAVNCNPMEM+ CLPA ESS PPTAECCEK+KEQEPCFCAYLKSP  KPYLESPNAKKI++SC V  P
Subjt:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

XP_023527041.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]1.6e-2770Show/hide
Query:  LSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        L + V  M MVAL+TGA  A+AVNC+P EM+ACLPA +S+ PPTAECC+KVK+QE C C YLKSP LKPYLESPNAKKI+SSCG+  PTC
Subjt:  LSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

TrEMBL top hitse value%identityAlignment
A0A0A0KW09 AAI domain-containing protein3.4e-3683.33Show/hide
Query:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSIS SLCLSV VMAMVM VALITGA  ADAVNCNPMEM+ CLPA ESS PPTAECCEK+KEQEPCFCAYLKSP  KPYLESPNAKKI++SC V  P
Subjt:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

A0A5A7VF50 Non-specific lipid-transfer protein 2-like1.8e-3479.41Show/hide
Query:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSISS LCLS ++MA VM VALITGAR ADAVNCNP EM+ CLPA ESS PPTAECCEK+KEQEPCFC YLKSP  K YLESPNAKKI+SSCG+  P
Subjt:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

A0A5D2S9U2 AAI domain-containing protein2.1e-2253Show/hide
Query:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        MK+VS  +LC    V+A+ +V     +R A+AV CNPME+  CLPAF SS+PP++ CC K+K Q+PC C Y+K+P+LK Y+ SPNAKK++S+CGV +P C
Subjt:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

A0A5N5G8U2 Non-specific lipid-transfer protein 2-like9.5e-2353.61Show/hide
Query:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        + +SS  L+  +M  ++VAL   AR  +AV C+P+E+  CL A  S APP+A CCEK+KEQ+PCFC Y+K+P LKPY+++PNAKK++S+CGV FP C
Subjt:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

A0A6A2X1V6 Non-specific lipid-transfer protein 22.1e-2255Show/hide
Query:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        MK VS  +LC    V+A+ +V L      A+AV C+PM++ AC+PAF S A PTA CC K+K+Q+PCFC Y+K+PALK Y+ SPNAKK++S+CGV FP C
Subjt:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 25.0e-1342.86Show/hide
Query:  LSVTVMAMVMVALITGARPADA-VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        L+V V+A+ MVA   G     A  +CN  ++  C  A    A PTA CC  ++ Q+ CFC + K P    Y+ SPNA+K  SSCG+A PTC
Subjt:  LSVTVMAMVMVALITGARPADA-VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

P82353 Non-specific lipid-transfer protein 24.9e-1648.53Show/hide
Query:  VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V C+P+++  CL    S AP    CC+K++EQ PC C YLK+P+L+ Y+ SPNA+K++S+CGV  P C
Subjt:  VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

P86809 Non-specific lipid-transfer protein 22.0e-1453.23Show/hide
Query:  CNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVA
        C+ +++  CL A   + PP+A CC K+KEQ+PC C YLK P LK Y+ SP A+K +SSCGVA
Subjt:  CNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVA

Q10ST8 Non-specific lipid-transfer protein 26.6e-1342.86Show/hide
Query:  LSVTVMAMVMVALITGARPADA-VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        L+V V+A+ MVA   G     A   CN  ++  C  A    A PTA CC  ++ Q+ CFC + K P    Y+ SPNA+K  SSCG+A PTC
Subjt:  LSVTVMAMVMVALITGARPADA-VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

Q43681 Probable non-specific lipid-transfer protein AKCS92.3e-1843.88Show/hide
Query:  KVSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        K+ +S +C     + +V + LI     A+AV CNP E+ +C+PA    + P++ CC K+K QEPC C Y+K+P+LK Y+ SP AKK+ S+CGV +P C
Subjt:  KVSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.8e-1942.05Show/hide
Query:  VTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V+V+A+    L+     A+ V C+PM++ +C  A  SS+PP+  CC K++EQ+PC C Y+++P L+ Y+ SPNA+K+S+SC +  P+C
Subjt:  VTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.4e-1339.47Show/hide
Query:  TGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        TG      V C+  +++ CL A      P+  CC K+ EQ+ C C + K+PA   Y+ SPNA+K+  +C VA+PTC
Subjt:  TGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.2e-1944.32Show/hide
Query:  VTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V++ A+  V L+  A  A+AV C+PM++  C  A  SS+PP+A CC K+KEQ PC C Y+++P+L+ ++ +PNA+K+S SC +  P C
Subjt:  VTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.6e-1437.8Show/hide
Query:  VMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V   ++ G+     V C+  ++ +C+ A  + APP+ +CC K+KE E C C Y+++P    Y+ SPNA+K  ++C VA+PTC
Subjt:  VMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.9e-1545.59Show/hide
Query:  VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V C+ +++ +C     +  PP+ ECC K+KEQ+PCFC Y+K P    Y+ S NAKK  ++CGV +PTC
Subjt:  VNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGTTTCGATTTCAAGTCTTTGCCTTTCGGTGACAGTGATGGCAATGGTGATGGTGGCGCTTATTACCGGAGCTCGACCGGCAGACGCTGTGAATTGTAACCC
TATGGAGATGAAAGCATGTCTTCCTGCATTCGAATCGTCAGCGCCGCCAACAGCTGAATGCTGTGAGAAAGTGAAAGAGCAAGAGCCATGCTTTTGTGCATACCTGAAAA
GTCCAGCTTTGAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTAGTTCTTCTTGTGGCGTTGCCTTCCCCACCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGTTTCGATTTCAAGTCTTTGCCTTTCGGTGACAGTGATGGCAATGGTGATGGTGGCGCTTATTACCGGAGCTCGACCGGCAGACGCTGTGAATTGTAACCC
TATGGAGATGAAAGCATGTCTTCCTGCATTCGAATCGTCAGCGCCGCCAACAGCTGAATGCTGTGAGAAAGTGAAAGAGCAAGAGCCATGCTTTTGTGCATACCTGAAAA
GTCCAGCTTTGAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTAGTTCTTCTTGTGGCGTTGCCTTCCCCACCTGCTAG
Protein sequenceShow/hide protein sequence
MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPMEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC