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Lsi07G009300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNon-specific lipid-transfer protein 2-like
Genome locationchr07:11263412..11263696
RNA-Seq ExpressionLsi07G009300
SyntenyLsi07G009300
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064158.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]3.4e-3277.42Show/hide
Query:  KLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        KL G GLCLLVVVAI LTGVRLG A +CNP ELSPCV+AITSS APTAACCQKL+QQE CYCGYLKDPK+K Y +SPRVRA+AS C V +P+C
Subjt:  KLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

KAG6581741.1 hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3272.63Show/hide
Query:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAA-PTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M+ LH +GLCLLV+VAILTG  +G AV+CNP ELSPC++AITS+ A PT ACC+KLKQQ+ C+CGYLKDP+FKPYVQSPR R VASICH+ VPRC
Subjt:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAA-PTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

KGN53813.1 hypothetical protein Csa_015036 [Cucumis sativus]2.6e-3275.79Show/hide
Query:  MRKLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M K+ GTGLCLLVVVAI L+ VRLG AV+CNP ELSPCV+AITSS APTAACCQKL+QQE CYCGYLKDPK+K Y +SPRVRA+AS C V +P+C
Subjt:  MRKLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

XP_022158506.1 non-specific lipid-transfer protein 2-like [Momordica charantia]1.3e-2361.22Show/hide
Query:  MRKLHGTGLCLLV----VVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M+K     LCLLV     VA+L+G R   A  CNPMELSPC+ AITSSA P+  CCQKLKQQ+ C+C Y KDP+ KPYV+SPR +AVASIC + VPRC
Subjt:  MRKLHGTGLCLLV----VVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

XP_038904866.1 non-specific lipid-transfer protein 2-like [Benincasa hispida]2.7e-2157.29Show/hide
Query:  MRKLHGTGLCLLVV--VAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M+ L  T L LLVV   A+LTG RL  AVTC+ MELSPC+ A TS+A P+AACC KLK+Q+ C+CGY+K+PK   YV+SPR + V S C V  P+C
Subjt:  MRKLHGTGLCLLVV--VAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

TrEMBL top hitse value%identityAlignment
A0A0A0KW09 AAI domain-containing protein2.4e-2052.33Show/hide
Query:  LCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        + +++VVA++TG  L +AV CNPME+ PC+ A+ SS  PTA CC+KLK+QE C+C YLK P FKPY++SP  + +A+ C V +P C
Subjt:  LCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

A0A0A0KW80 AAI domain-containing protein1.2e-3275.79Show/hide
Query:  MRKLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M K+ GTGLCLLVVVAI L+ VRLG AV+CNP ELSPCV+AITSS APTAACCQKL+QQE CYCGYLKDPK+K Y +SPRVRA+AS C V +P+C
Subjt:  MRKLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

A0A2C9WJN9 AAI domain-containing protein1.9e-2053.61Show/hide
Query:  MRKLHGTGLCLLVVVA---ILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M+K+ G+ LC +V+VA   ++T VRL NA TCNP  LS C+ AITSS  P++ACC  LKQQ+ C+C YLK+P  K Y+ SP  R VAS C V +P+C
Subjt:  MRKLHGTGLCLLVVVA---ILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

A0A5D3BT00 Non-specific lipid-transfer protein 2-like1.6e-3277.42Show/hide
Query:  KLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        KL G GLCLLVVVAI LTGVRLG A +CNP ELSPCV+AITSS APTAACCQKL+QQE CYCGYLKDPK+K Y +SPRVRA+AS C V +P+C
Subjt:  KLHGTGLCLLVVVAI-LTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

A0A6J1E135 non-specific lipid-transfer protein 2-like6.2e-2461.22Show/hide
Query:  MRKLHGTGLCLLV----VVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M+K     LCLLV     VA+L+G R   A  CNPMELSPC+ AITSSA P+  CCQKLKQQ+ C+C Y KDP+ KPYV+SPR +AVASIC + VPRC
Subjt:  MRKLHGTGLCLLV----VVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 22.3e-1239.36Show/hide
Query:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        MR+L    L + +V A   GV      +CN  +L+ C  AI   A PTAACC  L+ Q+ C+C + KDP++  YV SP  R   S C + +P C
Subjt:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

P20145 Probable non-specific lipid-transfer protein4.7e-1335.11Show/hide
Query:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        MRK     + +++VV +  G   G    C P +L+ C +AI     P+  CC  L+ Q+ C C Y+KDP +  YV SP  R   ++C + VP C
Subjt:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

P82353 Non-specific lipid-transfer protein 21.7e-1552.94Show/hide
Query:  VTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        VTC+P++LSPC+  I S A     CCQKL++Q  C CGYLK+P  + YV SP  R +AS C V VP+C
Subjt:  VTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

P86809 Non-specific lipid-transfer protein 21.7e-1559.68Show/hide
Query:  TCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHV
        TC+ ++LSPC+AAIT +  P+AACC KLK+Q+ C CGYLKDP  K YV SP  R  AS C V
Subjt:  TCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHV

Q43681 Probable non-specific lipid-transfer protein AKCS96.0e-1646.81Show/hide
Query:  KLHGTGLCLLVVVA--ILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        K+  + +C +VVVA  ++    +  AVTCNP ELS CV AIT  + P++ CC KLK QE C C Y+K+P  K YV SP  + V S C V  P C
Subjt:  KLHGTGLCLLVVVA--ILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.2e-1740.43Show/hide
Query:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M K+    +  L    +L  V +   VTC+PM+L+ C AA+TSS+ P+ ACC KL++Q+ C CGY+++P  + YV SP  R V++ C +  P C
Subjt:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.2e-1548.53Show/hide
Query:  VTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        VTC+  +L PC+AAIT    P+ ACC KL +Q+SC CG+ K+P F  Y+ SP  R V   C+V  P C
Subjt:  VTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.5e-1436.9Show/hide
Query:  LLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        +L+++ +    R+     CNP +LSPC+  I   + P+  CC K+K+Q+ C C YLK+P FK ++ SP  + +A+ CH   P+C
Subjt:  LLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.8e-1843.62Show/hide
Query:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        M K     L  L  V ++       AVTC+PM+LSPC  AITSS+ P+A CC KLK+Q  C CGY+++P  + +V +P  R V+  C + +PRC
Subjt:  MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.8e-1242.65Show/hide
Query:  VTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC
        VTC+  +LS CV A+++ A P+  CC KLK+ E+C C Y+++P +  YV SP  R   + C V  P C
Subjt:  VTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAACTTCATGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCGATTCTCACCGGAGTTCGTCTCGGCAATGCGGTGACTTGCAATCCCATGGAGCTGAGCCCTTG
TGTTGCTGCAATCACATCATCAGCAGCGCCTACAGCTGCTTGCTGTCAGAAGTTGAAGCAGCAAGAATCTTGCTATTGTGGGTATCTAAAAGATCCAAAGTTCAAACCTT
ATGTACAATCTCCTCGCGTTAGAGCCGTTGCTTCCATCTGTCATGTCCATGTCCCTAGATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAACTTCATGGCACAGGCCTTTGCCTTCTTGTGGTGGTGGCGATTCTCACCGGAGTTCGTCTCGGCAATGCGGTGACTTGCAATCCCATGGAGCTGAGCCCTTG
TGTTGCTGCAATCACATCATCAGCAGCGCCTACAGCTGCTTGCTGTCAGAAGTTGAAGCAGCAAGAATCTTGCTATTGTGGGTATCTAAAAGATCCAAAGTTCAAACCTT
ATGTACAATCTCCTCGCGTTAGAGCCGTTGCTTCCATCTGTCATGTCCATGTCCCTAGATGCTAG
Protein sequenceShow/hide protein sequence
MRKLHGTGLCLLVVVAILTGVRLGNAVTCNPMELSPCVAAITSSAAPTAACCQKLKQQESCYCGYLKDPKFKPYVQSPRVRAVASICHVHVPRC