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Lsi07G009310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnon-specific lipid-transfer protein 2-like
Genome locationchr07:11322357..11322650
RNA-Seq ExpressionLsi07G009310
SyntenyLsi07G009310
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064150.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]1.6e-2472.15Show/hide
Query:  MVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        M LL+GA   +A +C P EL+PC+DAI+SSSVAPSS CC+KMEEQ PCLCQYAKIP  +P +AGGQRVAA CGVTLPVC
Subjt:  MVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

KAE8648023.1 hypothetical protein Csa_005844, partial [Cucumis sativus]5.2e-2075Show/hide
Query:  NPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        +PS   PC+DAI+SSSV PSS CC+KMEEQ PCLCQYAKIP  +P +AGGQRVAA CGVTLPVC
Subjt:  NPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

KAG6581743.1 hypothetical protein SDJN03_21745, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2670.1Show/hide
Query:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        MK LSI+SLCVLVA A TM LLTGA +ADA DCNPSELSPCL AI +SS  P+SSCC KM EQ PCLC Y K P+ +P+V GG+RVAAACG+T+P C
Subjt:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

XP_022955891.1 non-specific lipid-transfer protein 2-like [Cucurbita moschata]3.7e-2670.1Show/hide
Query:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        MK LSI+SLCVLVA  ATM LLTGA +ADA DCNPSELSPCL AI +SS  P+SSCC KM EQ PCLC Y K P+ +P+V GG+RVAAACG+T+P C
Subjt:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

XP_023527040.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]3.1e-2568.04Show/hide
Query:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        MK LSI+SLCVLV   A+M LLTGA +ADA DCNPSELSPCL AI +SS  P+SSCC KM EQ PCLC Y K P+ +P+V GG+RVAAACG+T+P C
Subjt:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

TrEMBL top hitse value%identityAlignment
A0A0A0L0Z5 Uncharacterized protein5.4e-3174.23Show/hide
Query:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        M  LSITSLCVLVAV   M LLTGAR  DA +C P EL+PC+DAI+SSSV PSS CC+KMEEQ PCLCQYAKIP  +P +AGGQRVAA CGVTLPVC
Subjt:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

A0A5A7VA95 Non-specific lipid-transfer protein 2-like7.5e-2572.15Show/hide
Query:  MVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        M LL+GA   +A +C P EL+PC+DAI+SSSVAPSS CC+KMEEQ PCLCQYAKIP  +P +AGGQRVAA CGVTLPVC
Subjt:  MVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

A0A6J1CQB8 non-specific lipid-transfer protein 2-like1.2e-1454.55Show/hide
Query:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC
        MK L IT L +L  V A M LLTGA +A+A  C+P +LS C  AI SSS  PS+SCC K+ EQ PCLC Y K P L P+V   G + VA+ACGV  P C
Subjt:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC

A0A6J1E135 non-specific lipid-transfer protein 2-like1.1e-1551.52Show/hide
Query:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAG--GQRVAAACGVTLPVC
        MK   + SLC+LVAV AT+ LL+GAR  +AA CNP ELSPCL AI +SS  PS+ CC K+++Q PC C+YAK P+++P+V     + VA+ C + +P C
Subjt:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAG--GQRVAAACGVTLPVC

A0A6J1GV37 non-specific lipid-transfer protein 2-like1.8e-2670.1Show/hide
Query:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        MK LSI+SLCVLVA  ATM LLTGA +ADA DCNPSELSPCL AI +SS  P+SSCC KM EQ PCLC Y K P+ +P+V GG+RVAAACG+T+P C
Subjt:  MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

SwissProt top hitse value%identityAlignment
P82353 Non-specific lipid-transfer protein 23.3e-0944.78Show/hide
Query:  CNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC
        C+P +LSPCL  I S + +P ++CC K+ EQ PCLC Y K P L  +V     +++A+ CGV +P C
Subjt:  CNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC

Q43681 Probable non-specific lipid-transfer protein AKCS99.2e-1242.71Show/hide
Query:  LSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC
        + ++ +C +V VA  + L+    +A+A  CNP+ELS C+ AI   S  PSS+CC K++ Q PCLC Y K P L+ +V   G ++V + CGVT P C
Subjt:  LSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC

Arabidopsis top hitse value%identityAlignment
AT1G07747.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.3e-0833.72Show/hide
Query:  LVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        LV VA  +  +   +  + A C  ++L  CL  I      PS+ CC K++++  C C+Y K P + P++   ++V  ACGV +PVC
Subjt:  LVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.7e-0835.38Show/hide
Query:  CNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC
        C  +EL PCL ++   S  PS+ CC K++EQ  C C Y + P+   ++   +++ AAC +  P C
Subjt:  CNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.5e-0631.07Show/hide
Query:  LSITSLCVLVAVAATMVLLTGARLADAAD-------CNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVA--GGQRVAAACGVTL
        + I +L ++V V  +       +  D  D       C+  +L PCL AI      PS +CC K+ EQ  CLC +AK P    +++    ++V  AC V  
Subjt:  LSITSLCVLVAVAATMVLLTGARLADAAD-------CNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVA--GGQRVAAACGVTL

Query:  PVC
        P C
Subjt:  PVC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein7.5e-0940.54Show/hide
Query:  RLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC
        R+A    CNP++LSPCL+ I   S  PS  CC K++EQ  C+CQY K P  + F+     + +A  C    P C
Subjt:  RLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.3e-0839.08Show/hide
Query:  VAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC
        V++ AT V L+G   AD   C+  +LS C   +  + V PS+ CC K++EQ PC C Y K P+   +V  A  ++  A CGV  P C
Subjt:  VAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFV--AGGQRVAAACGVTLPVC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTATTGTCAATAACAAGTCTCTGTGTTTTGGTGGCGGTGGCGGCGACGATGGTGCTTCTGACTGGAGCTCGTTTGGCCGATGCGGCGGACTGCAATCCTTCGGA
GCTGAGCCCATGTCTTGATGCAATTAGGTCGTCGTCGGTGGCACCGTCGAGCAGTTGCTGCGTTAAGATGGAAGAGCAGGGGCCGTGCCTCTGCCAATACGCTAAGATTC
CAAAGTTGGAGCCTTTCGTTGCCGGCGGGCAACGGGTTGCCGCTGCTTGCGGCGTCACGCTTCCTGTGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTATTGTCAATAACAAGTCTCTGTGTTTTGGTGGCGGTGGCGGCGACGATGGTGCTTCTGACTGGAGCTCGTTTGGCCGATGCGGCGGACTGCAATCCTTCGGA
GCTGAGCCCATGTCTTGATGCAATTAGGTCGTCGTCGGTGGCACCGTCGAGCAGTTGCTGCGTTAAGATGGAAGAGCAGGGGCCGTGCCTCTGCCAATACGCTAAGATTC
CAAAGTTGGAGCCTTTCGTTGCCGGCGGGCAACGGGTTGCCGCTGCTTGCGGCGTCACGCTTCCTGTGTGTTAG
Protein sequenceShow/hide protein sequence
MKLLSITSLCVLVAVAATMVLLTGARLADAADCNPSELSPCLDAIRSSSVAPSSSCCVKMEEQGPCLCQYAKIPKLEPFVAGGQRVAAACGVTLPVC