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Lsi07G009400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:11655126..11655497
RNA-Seq ExpressionLsi07G009400
SyntenyLsi07G009400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042447.1 hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa]5.7e-4882.76Show/hide
Query:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS
        MATTF IPTMAI+ILILLFN  GCNT VNETA EWC GSENCL+GD+SSDSEFLMET TSRMLLDFQ LQTPSTN+ N+QSVP+CGRPPRYDSC G+KRS
Subjt:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS

Query:  ISHPENCDARNRVNPC
        IS+PENCD RNR NPC
Subjt:  ISHPENCDARNRVNPC

KAE8649335.1 hypothetical protein Csa_014907 [Cucumis sativus]1.1e-4379.13Show/hide
Query:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS
        MATTF IPTMAILIL LLFNP  CNT VNET SEWC GSENCLVGD+S DSEFLMET TSRMLLDFQ LQTP T D N+QSV +CGRPPRYDSCTG++R 
Subjt:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS

Query:  ISHPENCDARNRVNP
        I +PENCD RNR NP
Subjt:  ISHPENCDARNRVNP

KAG6607065.1 hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3865.6Show/hide
Query:  MGLSSNTMATTFLIPTMAILILILLFNPAG-CNTAVNETASEWCDGS-ENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRY
        MG++SNTMA T L P+M IL +ILL NP    + A+N+TA+EWCDG  ENCL+GD +SDSEFLMET TSRMLLDF   QTP+TN+ +KQS P+C RPPRY
Subjt:  MGLSSNTMATTFLIPTMAILILILLFNPAG-CNTAVNETASEWCDGS-ENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRY

Query:  DSCTGDKRSISHPENCDARNRVNPC
        D C G K  I +PENCD RNRVNPC
Subjt:  DSCTGDKRSISHPENCDARNRVNPC

KAG7011063.1 hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-3967.2Show/hide
Query:  MGLSSNTMATTFLIPTMAILILILLFNPAG-CNTAVNETASEWCDGS-ENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRY
        MG++SNTMA T L P+M IL +ILL NP    + A+N+TA+EWCDG  ENCL+GD +SDSEFLMET TSRMLLDF   QTP+TN+ +KQS P+C RPPRY
Subjt:  MGLSSNTMATTFLIPTMAILILILLFNPAG-CNTAVNETASEWCDGS-ENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRY

Query:  DSCTGDKRSISHPENCDARNRVNPC
        DSC G K SI +PENCD RNRVNPC
Subjt:  DSCTGDKRSISHPENCDARNRVNPC

KGN53798.1 hypothetical protein Csa_014747 [Cucumis sativus]2.6e-3262.9Show/hide
Query:  LSSNTMATTFLIPTMAILILILLFNPAGCNTAVNETASEWCD--GSENCLVGDKSSDSEFLMETGTSRMLLD-FQKLQTPSTNDANKQSVPDCGRPPRYD
        L SN+MA T  +P+MA LI ILL NP   N  +N+T S+WCD  G ENCLVGD +S SEFLM T +S ML+D F   QTP  NDANK+SVPDC RPPRYD
Subjt:  LSSNTMATTFLIPTMAILILILLFNPAGCNTAVNETASEWCD--GSENCLVGDKSSDSEFLMETGTSRMLLD-FQKLQTPSTNDANKQSVPDCGRPPRYD

Query:  SCTGDKRSISHPENCDARNRVNPC
        SC G KRSI +PE C   NRVNPC
Subjt:  SCTGDKRSISHPENCDARNRVNPC

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ2 Uncharacterized protein4.9e-4579.31Show/hide
Query:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS
        MATTF IPTMAILIL LLFNP  CNT VNET SEWC GSENCLVGD+S DSEFLMET TSRMLLDFQ LQTP T D N+QSV +CGRPPRYDSCTG++R 
Subjt:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS

Query:  ISHPENCDARNRVNPC
        I +PENCD RNR NPC
Subjt:  ISHPENCDARNRVNPC

A0A0A0KW62 Uncharacterized protein1.2e-3262.9Show/hide
Query:  LSSNTMATTFLIPTMAILILILLFNPAGCNTAVNETASEWCD--GSENCLVGDKSSDSEFLMETGTSRMLLD-FQKLQTPSTNDANKQSVPDCGRPPRYD
        L SN+MA T  +P+MA LI ILL NP   N  +N+T S+WCD  G ENCLVGD +S SEFLM T +S ML+D F   QTP  NDANK+SVPDC RPPRYD
Subjt:  LSSNTMATTFLIPTMAILILILLFNPAGCNTAVNETASEWCD--GSENCLVGDKSSDSEFLMETGTSRMLLD-FQKLQTPSTNDANKQSVPDCGRPPRYD

Query:  SCTGDKRSISHPENCDARNRVNPC
        SC G KRSI +PE C   NRVNPC
Subjt:  SCTGDKRSISHPENCDARNRVNPC

A0A5D3BS53 Uncharacterized protein6.2e-1643.59Show/hide
Query:  ATTFLIPTMAILILILLFNPAGCN--TAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKR
        A+  +IP   + +++LL  P+ C   T      S      E  +VG++  D EF+ME+  SR+L   Q  QT ST DANK S   CGRPPRYDSC G KR
Subjt:  ATTFLIPTMAILILILLFNPAGCN--TAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKR

Query:  SISHPENCDARNRVNPC
        +   P NC   NR NPC
Subjt:  SISHPENCDARNRVNPC

A0A5D3BZL1 Uncharacterized protein2.8e-4882.76Show/hide
Query:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS
        MATTF IPTMAI+ILILLFN  GCNT VNETA EWC GSENCL+GD+SSDSEFLMET TSRMLLDFQ LQTPSTN+ N+QSVP+CGRPPRYDSC G+KRS
Subjt:  MATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRS

Query:  ISHPENCDARNRVNPC
        IS+PENCD RNR NPC
Subjt:  ISHPENCDARNRVNPC

A0A6J1G927 uncharacterized protein LOC1114520448.1e-1646.15Show/hide
Query:  MATTFLIPTMAILILILLFNPAGCNTAVN-ETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKR
        MA   +I   A+ I+ILL NP   +   + +  +     +   L+GD+  DSEFLME+  SR+L   Q  QT  TNDANK S   CGRPPRYDSC G K 
Subjt:  MATTFLIPTMAILILILLFNPAGCNTAVN-ETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKR

Query:  SISHPENCDARNRVNPC
        +   PENC   NR NPC
Subjt:  SISHPENCDARNRVNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTTCCTCAAACACCATGGCTACAACATTTCTGATACCAACCATGGCAATTCTGATACTGATTCTACTGTTCAACCCAGCGGGCTGCAACACTGCGGTCAACGA
GACAGCATCGGAGTGGTGCGACGGGTCCGAGAATTGCCTTGTTGGCGACAAGAGCTCGGACTCGGAGTTTCTGATGGAGACAGGGACCAGCCGAATGCTGCTGGACTTTC
AGAAATTACAAACTCCGAGCACTAACGACGCTAACAAACAATCGGTTCCGGACTGTGGTCGGCCGCCGCGGTATGACAGCTGCACCGGTGACAAAAGGAGTATCTCCCAC
CCTGAAAATTGCGACGCTCGAAATCGCGTCAATCCATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTTCCTCAAACACCATGGCTACAACATTTCTGATACCAACCATGGCAATTCTGATACTGATTCTACTGTTCAACCCAGCGGGCTGCAACACTGCGGTCAACGA
GACAGCATCGGAGTGGTGCGACGGGTCCGAGAATTGCCTTGTTGGCGACAAGAGCTCGGACTCGGAGTTTCTGATGGAGACAGGGACCAGCCGAATGCTGCTGGACTTTC
AGAAATTACAAACTCCGAGCACTAACGACGCTAACAAACAATCGGTTCCGGACTGTGGTCGGCCGCCGCGGTATGACAGCTGCACCGGTGACAAAAGGAGTATCTCCCAC
CCTGAAAATTGCGACGCTCGAAATCGCGTCAATCCATGTTAG
Protein sequenceShow/hide protein sequence
MGLSSNTMATTFLIPTMAILILILLFNPAGCNTAVNETASEWCDGSENCLVGDKSSDSEFLMETGTSRMLLDFQKLQTPSTNDANKQSVPDCGRPPRYDSCTGDKRSISH
PENCDARNRVNPC