; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G009730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbiogenesis of lysosome-related organelles complex 1 subunit 2
Genome locationchr07:12822102..12824173
RNA-Seq ExpressionLsi07G009730
SyntenyLsi07G009730
Gene Ontology termsNA
InterPro domainsIPR019269 - Biogenesis of lysosome-related organelles complex-1, subunit 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607085.1 Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5090.08Show/hide
Query:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSACQNT
        SMLDKH+SMLESKVLS CQN+
Subjt:  SMLDKHVSMLESKVLSACQNT

XP_004137147.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus]1.6e-5596.69Show/hide
Query:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEE+LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN+RVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSACQNTP
        MLDKHVSMLESKVLS CQNTP
Subjt:  MLDKHVSMLESKVLSACQNTP

XP_008455567.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo]8.9e-5494.21Show/hide
Query:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSACQNTP
        MLDKHVSMLESKVLS CQNTP
Subjt:  MLDKHVSMLESKVLSACQNTP

XP_022949044.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata]4.6e-5090.08Show/hide
Query:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSACQNT
        SMLDKH+SMLESKVLS CQN+
Subjt:  SMLDKHVSMLESKVLSACQNT

XP_038880795.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida]1.1e-5495.87Show/hide
Query:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEEQ PNRD+LAESLNEFFTSVSEMIKSDLLGSSNQLALLERMN+RVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSACQNTP
        MLDKHVSMLESKVLS CQNTP
Subjt:  MLDKHVSMLESKVLSACQNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KW18 Uncharacterized protein7.9e-5696.69Show/hide
Query:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEE+LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN+RVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
Subjt:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSACQNTP
        MLDKHVSMLESKVLS CQNTP
Subjt:  MLDKHVSMLESKVLSACQNTP

A0A1S3C0T0 biogenesis of lysosome-related organelles complex 1 subunit 24.3e-5494.21Show/hide
Query:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MAQKEE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLERMN RVAEEYKG+GDVASGMRVFVEQLKSKSGGFDEYI+QIEKIEHQVTEFEAVIS
Subjt:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSACQNTP
        MLDKHVSMLESKVLS CQNTP
Subjt:  MLDKHVSMLESKVLSACQNTP

A0A6J1GBP4 biogenesis of lysosome-related organelles complex 1 subunit 22.2e-5090.08Show/hide
Query:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSACQNT
        SMLDKH+SMLESKVLS CQN+
Subjt:  SMLDKHVSMLESKVLSACQNT

A0A6J1KEZ0 biogenesis of lysosome-related organelles complex 1 subunit 22.2e-5090.08Show/hide
Query:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI
        MA+KEE QLPN D+LAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MN+RVAEEYKG GDVASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVI
Subjt:  MAQKEE-QLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVI

Query:  SMLDKHVSMLESKVLSACQNT
        SMLDKH+SMLESKVLS CQN+
Subjt:  SMLDKHVSMLESKVLSACQNT

W9R9H2 Uncharacterized protein7.4e-3871.79Show/hide
Query:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS
        MA+K +Q P+RD+LAESLN+ FTSV  M+KS+L G++NQL LLE+MN+RV EEYKG+GDVASG+RVFVEQLKSKSG FDEY  +IE I+ QVTEFEAVIS
Subjt:  MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVIS

Query:  MLDKHVSMLESKVLSAC
        MLD++VS LESK+ SAC
Subjt:  MLDKHVSMLESKVLSAC

SwissProt top hitse value%identityAlignment
F4K657 Biogenesis of lysosome-related organelles complex 1 subunit 25.9e-3265.38Show/hide
Query:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RDDLAESL   FTSVS M+KS+L G++N L LLE+MN+RVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV

Q32WR5 Biogenesis of lysosome-related organelles complex-1 subunit 21.6e-0528.44Show/hide
Query:  KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   D+ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Q4R7C8 Biogenesis of lysosome-related organelles complex 1 subunit 29.4e-0628.44Show/hide
Query:  KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   D+ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Q54Y67 Biogenesis of lysosome-related organelles complex 1 subunit 24.4e-1135.85Show/hide
Query:  LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS
        LP  +DL  S  E FT VS  IKS+L  + +   LL +MN   + +Y+   +V  G+ VF+  LK K   F  Y ++I +++  VT+ E  + +LD++  
Subjt:  LPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVS

Query:  MLESKV
         LE KV
Subjt:  MLESKV

Q6QNY1 Biogenesis of lysosome-related organelles complex 1 subunit 29.4e-0628.44Show/hide
Query:  KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD
        +E + P   D+ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  +   ++ L  K  G   Y++QI  IE QV   E     LD
Subjt:  KEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLD

Query:  KHVSMLESK
         +   LE+K
Subjt:  KHVSMLESK

Arabidopsis top hitse value%identityAlignment
AT5G49550.1 Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.4.2e-3365.38Show/hide
Query:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML
        +RDDLAESL   FTSVS M+KS+L G++N L LLE+MN+RVA EY   GDVA+G+RVF EQ+KSKSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+L
Subjt:  NRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSML

Query:  ESKV
        ESK+
Subjt:  ESKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGAAAGAGGAGCAGTTGCCGAACAGGGACGACCTCGCCGAGTCGCTTAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCAGACCTTCTTGGATCAAG
TAATCAGCTGGCACTTTTAGAGAGAATGAACGTCAGGGTGGCCGAAGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAACTGAAGTCAA
AGAGTGGTGGGTTTGATGAGTATATAAACCAAATTGAGAAAATAGAACATCAGGTCACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAG
TCTAAAGTGTTGTCTGCTTGTCAAAACACGCCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAATTATCCATCAACCGCAGTTAACACAGCAGCATCAGCATCAGCATCTGGTTCGCTGTTGTCTCTAACCCGTCGCTTAAGATCCAGCAGCAGTTCTGTGTCCGAC
AAGGCGACAGCGAGTGATCAAAATTCCAGGAAGAAATAAGGAAGTTTGGCGGCCTGAGGTACCGTATTTGCAAGACTCACGGTTGAGATCTTATTTCATGGCCCAGAAAG
AGGAGCAGTTGCCGAACAGGGACGACCTCGCCGAGTCGCTTAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCAGACCTTCTTGGATCAAGTAATCAGCTGGCA
CTTTTAGAGAGAATGAACGTCAGGGTGGCCGAAGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAACTGAAGTCAAAGAGTGGTGGGTT
TGATGAGTATATAAACCAAATTGAGAAAATAGAACATCAGGTCACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGTTGGAGTCTAAAGTGTTGT
CTGCTTGTCAAAACACGCCTTAATAAATAAATTTATTTTTTCATCTTCAGAATTCAGAATGCTTCTTTTCTGAATGTTTGTGCTTCTATGTTGCTGCTCATTGTCCAATC
TTTTATGATATCATATTCCTTGGAAGTTGATGGCGAAAA
Protein sequenceShow/hide protein sequence
MAQKEEQLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNVRVAEEYKGFGDVASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLE
SKVLSACQNTP