; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G009920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G009920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionhydroxyproline-rich glycoprotein family protein
Genome locationchr07:13644731..13646098
RNA-Seq ExpressionLsi07G009920
SyntenyLsi07G009920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462927.1 PREDICTED: uncharacterized protein LOC103501189 [Cucumis melo]7.4e-7777.83Show/hide
Query:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ
        ME+LT+S          H+QLS S D+QTA   IPELDKKLE S SECKT TPDEKTEEKQR+ VP       SKVPKSP KLN ECKTP+PDEKT++K+
Subjt:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ

Query:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL
        RILVPKNGSMDRSKVPKSP KVN EC+TPTQRVKIGGIE PKNGTPNRLKLPIAFKYPERY SPTDLMISPISKG+LARTRKGAVPSKMHELRN EMSLL
Subjt:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL

Query:  YQS
         QS
Subjt:  YQS

XP_011653365.1 uncharacterized protein LOC105435203 [Cucumis sativus]1.8e-7076.32Show/hide
Query:  ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQRILVPKNGSMDRS
        +++ HLQLS S DAQT    IPELDK+L+ S SE KT TP EKTEEKQRI V E      SKVPKSP +L  +C+TP+P+EKTEEK+RILVPKNGSMDRS
Subjt:  ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQRILVPKNGSMDRS

Query:  KVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLLYQS
        KVPKSPAKVN EC+TP QRVK+GGIE PKNGTPNRLKLP+AFKYPERY SPTD+MISPISKG+LARTRKGAVPSKMHELRN EMSLL QS
Subjt:  KVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLLYQS

XP_022155023.1 uncharacterized protein LOC111022170 [Momordica charantia]1.5e-3750.23Show/hide
Query:  MEILTQSTIPKTP-------------ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTP-TPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFE
        MEI  Q++IP +P             IS+Q  ++SG+ D        PE   ++       +TP TP+ +T +K           ++++      K N E
Subjt:  MEILTQSTIPKTP-------------ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTP-TPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFE

Query:  CKTPSPDEKTE---EKQRILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKG
         KT +P EK E   EK+RILVPKNGSMDR KVPKSP         P  +VK  GIE PKNGTPNRLK+P AFKYPERY SPTDLM+SPISKG+LARTRKG
Subjt:  CKTPSPDEKTE---EKQRILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKG

Query:  AVPSKMHELRNPEMSLLYQ
        AVPSKMHELR  EMSL+YQ
Subjt:  AVPSKMHELRNPEMSLLYQ

XP_022998048.1 uncharacterized protein LOC111492813 [Cucurbita maxima]2.3e-3854.55Show/hide
Query:  MEILTQSTIPKTPI------SEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKL---NFECKTPS
        MEI T+  IP TP       SEQ  + SG+ +    TT  PEL+                           P NG+ DR K  K+  ++     ECKTP+
Subjt:  MEILTQSTIPKTPI------SEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKL---NFECKTPS

Query:  PDEKTEEKQRILVPKNG-SMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMH
        PDEKTEEKQRILVP NG  MDR KVPKSP  V  E +   QR   GGI FPKNGTPNRLK+P AFKY ERYTSPTDLM+SPI+KG+LARTRKGAVPSKMH
Subjt:  PDEKTEEKQRILVPKNG-SMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMH

Query:  ELRNPEMSL
        ELR  EMSL
Subjt:  ELRNPEMSL

XP_038881324.1 uncharacterized protein LOC120072868 [Benincasa hispida]3.9e-9488.67Show/hide
Query:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ
        MEILTQ TIPK+PIS+Q LQ+ GS DAQTA TPIPELD+KLE+SK ECKTPTP+EKTEEKQRILV ENGS+DRS VPKSP KLN ECKTPSPDEKTEEK+
Subjt:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ

Query:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL
        RILV KNGSMDRSKVPKSPAK+N EC+TPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPE+SLL
Subjt:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL

Query:  YQS
        YQS
Subjt:  YQS

TrEMBL top hitse value%identityAlignment
A0A0A0L0M1 Uncharacterized protein8.5e-7176.32Show/hide
Query:  ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQRILVPKNGSMDRS
        +++ HLQLS S DAQT    IPELDK+L+ S SE KT TP EKTEEKQRI V E      SKVPKSP +L  +C+TP+P+EKTEEK+RILVPKNGSMDRS
Subjt:  ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQRILVPKNGSMDRS

Query:  KVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLLYQS
        KVPKSPAKVN EC+TP QRVK+GGIE PKNGTPNRLKLP+AFKYPERY SPTD+MISPISKG+LARTRKGAVPSKMHELRN EMSLL QS
Subjt:  KVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLLYQS

A0A1S3CI15 uncharacterized protein LOC1035011893.6e-7777.83Show/hide
Query:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ
        ME+LT+S          H+QLS S D+QTA   IPELDKKLE S SECKT TPDEKTEEKQR+ VP       SKVPKSP KLN ECKTP+PDEKT++K+
Subjt:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ

Query:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL
        RILVPKNGSMDRSKVPKSP KVN EC+TPTQRVKIGGIE PKNGTPNRLKLPIAFKYPERY SPTDLMISPISKG+LARTRKGAVPSKMHELRN EMSLL
Subjt:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL

Query:  YQS
         QS
Subjt:  YQS

A0A5A7UZK0 Uncharacterized protein3.6e-7777.83Show/hide
Query:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ
        ME+LT+S          H+QLS S D+QTA   IPELDKKLE S SECKT TPDEKTEEKQR+ VP       SKVPKSP KLN ECKTP+PDEKT++K+
Subjt:  MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQ

Query:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL
        RILVPKNGSMDRSKVPKSP KVN EC+TPTQRVKIGGIE PKNGTPNRLKLPIAFKYPERY SPTDLMISPISKG+LARTRKGAVPSKMHELRN EMSLL
Subjt:  RILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLL

Query:  YQS
         QS
Subjt:  YQS

A0A6J1DLV5 uncharacterized protein LOC1110221707.3e-3850.23Show/hide
Query:  MEILTQSTIPKTP-------------ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTP-TPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFE
        MEI  Q++IP +P             IS+Q  ++SG+ D        PE   ++       +TP TP+ +T +K           ++++      K N E
Subjt:  MEILTQSTIPKTP-------------ISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTP-TPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFE

Query:  CKTPSPDEKTE---EKQRILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKG
         KT +P EK E   EK+RILVPKNGSMDR KVPKSP         P  +VK  GIE PKNGTPNRLK+P AFKYPERY SPTDLM+SPISKG+LARTRKG
Subjt:  CKTPSPDEKTE---EKQRILVPKNGSMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKG

Query:  AVPSKMHELRNPEMSLLYQ
        AVPSKMHELR  EMSL+YQ
Subjt:  AVPSKMHELRNPEMSLLYQ

A0A6J1KFQ1 uncharacterized protein LOC1114928131.1e-3854.55Show/hide
Query:  MEILTQSTIPKTPI------SEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKL---NFECKTPS
        MEI T+  IP TP       SEQ  + SG+ +    TT  PEL+                           P NG+ DR K  K+  ++     ECKTP+
Subjt:  MEILTQSTIPKTPI------SEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKL---NFECKTPS

Query:  PDEKTEEKQRILVPKNG-SMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMH
        PDEKTEEKQRILVP NG  MDR KVPKSP  V  E +   QR   GGI FPKNGTPNRLK+P AFKY ERYTSPTDLM+SPI+KG+LARTRKGAVPSKMH
Subjt:  PDEKTEEKQRILVPKNG-SMDRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMH

Query:  ELRNPEMSL
        ELR  EMSL
Subjt:  ELRNPEMSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02120.1 hydroxyproline-rich glycoprotein family protein1.5e-1459.09Show/hide
Query:  KNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGA---VP-----SKMHELRNPEMSL
        K GTP RL++PIAFKYPERY SPTD M+SP++KG+LARTRK +   +P     +K+ ELR PE  L
Subjt:  KNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGA---VP-----SKMHELRNPEMSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTCTCACCCAATCAACCATTCCCAAAACTCCAATTTCTGAACAACATCTTCAACTTTCCGGCTCCAGCGACGCCCAAACGGCGACAACCCCAATCCCAGAACT
TGACAAGAAATTGGAAAATTCAAAGTCCGAGTGTAAAACTCCAACCCCAGATGAGAAAACAGAGGAAAAACAGAGGATTTTGGTTCCAGAAAATGGGTCCATGGATCGAT
CCAAGGTACCGAAGAGCCCAGCAAAGCTGAACTTTGAGTGCAAAACTCCAAGCCCAGATGAGAAAACAGAGGAAAAACAAAGGATTTTGGTTCCTAAAAATGGATCCATG
GATCGATCGAAGGTGCCGAAAAGCCCTGCAAAGGTGAATTTTGAGTGTAGAACTCCGACCCAAAGGGTAAAAATTGGAGGCATTGAGTTCCCTAAAAATGGCACTCCTAA
TCGCCTCAAACTCCCCATTGCATTCAAATACCCTGAAAGGTATACAAGTCCCACTGATTTGATGATCTCTCCTATCAGCAAAGGCATTCTTGCCAGAACTAGAAAAGGGG
CTGTTCCTTCCAAGATGCATGAGTTGAGAAATCCAGAGATGAGTCTTCTATATCAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
CAACGACTCTCCTCTGTTTTCCCTATTAAATAAATCTCACCGCAAACCCTATTCCCATTCCTCCATACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAACTAA
CCCTGTTTCAATGGAGATTCTCACCCAATCAACCATTCCCAAAACTCCAATTTCTGAACAACATCTTCAACTTTCCGGCTCCAGCGACGCCCAAACGGCGACAACCCCAA
TCCCAGAACTTGACAAGAAATTGGAAAATTCAAAGTCCGAGTGTAAAACTCCAACCCCAGATGAGAAAACAGAGGAAAAACAGAGGATTTTGGTTCCAGAAAATGGGTCC
ATGGATCGATCCAAGGTACCGAAGAGCCCAGCAAAGCTGAACTTTGAGTGCAAAACTCCAAGCCCAGATGAGAAAACAGAGGAAAAACAAAGGATTTTGGTTCCTAAAAA
TGGATCCATGGATCGATCGAAGGTGCCGAAAAGCCCTGCAAAGGTGAATTTTGAGTGTAGAACTCCGACCCAAAGGGTAAAAATTGGAGGCATTGAGTTCCCTAAAAATG
GCACTCCTAATCGCCTCAAACTCCCCATTGCATTCAAATACCCTGAAAGGTATACAAGTCCCACTGATTTGATGATCTCTCCTATCAGCAAAGGCATTCTTGCCAGAACT
AGAAAAGGGGCTGTTCCTTCCAAGATGCATGAGTTGAGAAATCCAGAGATGAGTCTTCTATATCAAAGCTGAACAAAATGGTTATAAAAATTTCATGGATTCTATTCTTT
TTCCTCTTCAAGAACTTGCCTCACTCAGATTGTGATGCAAAAATCAGTTCTAGTTCTTACAACCTTCTACTTCCAAGGCCTTTTTTTATCTTCATTTCTTTGTTTATTAT
TTCTTTCAATCTGCAGTTGTTGTGAATCATCATGTCATATATTGTGGGTTAGTGGGTGAAGTTTTTTACTTTTTCCTTAAGTGCTTTGAACAACATCCATTTGTGTAACT
ATTATTCAAACTTACTAATGCAAATGGTTTGATTGATAACAA
Protein sequenceShow/hide protein sequence
MEILTQSTIPKTPISEQHLQLSGSSDAQTATTPIPELDKKLENSKSECKTPTPDEKTEEKQRILVPENGSMDRSKVPKSPAKLNFECKTPSPDEKTEEKQRILVPKNGSM
DRSKVPKSPAKVNFECRTPTQRVKIGGIEFPKNGTPNRLKLPIAFKYPERYTSPTDLMISPISKGILARTRKGAVPSKMHELRNPEMSLLYQS