CuGenDBv2

Gene ID	Lsi07G009950
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein RIK isoform X1
Genome location	chr07:13817180..13824309
RNA-Seq Expression	Lsi07G009950
Synteny	Lsi07G009950
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR031121 - KH domain containing protein RIK/BLOM7

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581700.1 Protein RIK, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-160

71.85

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAA+MVEEMLRQGQN+ PLSFNSLNNDFK                             DQYINHIMAETGVTVSL GLGSGSTEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL
           +      ++          +D +S+E             +S VSSCKVYSAV PPQQVYGAVPPP          LQVYGAVPP PKVY+ VP PLL
Subjt:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL

Query:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL
        CSTPQ  +T V+SLGNEP+TSS SS ISSASPTIVS VSSVIPG APVI QGSILQ GL QSQSTAISY+KP IS GTNYNGYSGIYPQATPLQQVALAL
Subjt:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL

Query:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS
        KQVSSTT  VAVPNRSA SMSN+SV++DAEKEKRP+QRRKFQELPICVQGS ISNQDS+L  PSNKS  D+TVRNVSNMPAPRKLVQPSSN M PPRPRS
Subjt:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS

Query:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        MPPPPTPVKSTSTVK IVQDKELSLDT+K D+VSDTLVKLMEYG EEDDD EEGVESLNS NT+GG+A+RKPFWAV
Subjt:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV

XP_008460254.1 PREDICTED: protein RIK isoform X1 [Cucumis melo]

3.5e-161

70.93

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAASMVEEMLRQGQ+LAP SF+SLN +FK                             DQYINHI+AETGVTVSL GLG+GSTEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTVWL-DGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPL-----------------------
                 L ++L    S+ +   K+    L++       +S VSSCKVYSAVPPPQQVYGAVPPP QVYGAVPP                        
Subjt:  AYSIMKQFVLTVWL-DGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPL-----------------------

Query:  -------PKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGY
               PKVYS VP PLLCSTPQF RVESL NEPTTSS SSLISSASPTIVSPVSSVIPGVAPVIAQGSILQ GLPQSQSTAISYTKP ISGGTNYNGY
Subjt:  -------PKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGY

Query:  SGIYPQATPLQQVALALKQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPR
        SGIYPQATPLQQVALALKQVSSTTTPVAVPNR ALS+SNM VNSDAEKEKRPNQRRKFQELPICVQGSSI+NQDSELS NPSNK   ++V++VSNMPAPR
Subjt:  SGIYPQATPLQQVALALKQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPR

Query:  KLVQPSSNGMAPPRPRSMPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        KLV   SNGM PPRPRSMPPPPTPVK TSTVK I+QDKELS DT+KHDV+SDTLVKLMEYGEEDDD EEGVESLNS NTTG IA RKPFWAV
Subjt:  KLVQPSSNGMAPPRPRSMPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV

XP_011653367.1 protein RIK isoform X1 [Cucumis sativus]

5.0e-168

74.47

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAA+MVEEMLRQGQNLA LSF+ LNN+FK                             DQYINHIMAETGVTVSL GLG+G+TEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIM----------KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQ----------QVYGAVPPPLQVYGAVPPLPKVYSVVPHPL
         +  +           + +    +D +S+E             +S VSSCKVYSAVPPPQ          QVYGAVPPPLQVYGAVPPLPKVYS VP  L
Subjt:  AYSIM----------KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQ----------QVYGAVPPPLQVYGAVPPLPKVYSVVPHPL

Query:  LCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALK
        LCSTPQF RVESLGNEPTTSS SSLISSASPTIVSPVSSVIPGVAPVI+QGSILQ GLPQSQSTAISY KP ISGGTNYNGYSGIYPQATPLQQVALALK
Subjt:  LCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALK

Query:  QVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRSM
        QVSSTTTPVAVPNR ALS+SNM+VNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS NPSNK    TV++VSNMPAPRKLVQ SSNGM PP+PRSM
Subjt:  QVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRSM

Query:  PPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        PPPPTP KSTS VK IVQDKELSLDT+KHDVVSDTLVKLMEYG EDDD EEGVESLNS+NTTGGIANRKPFWAV
Subjt:  PPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV

XP_023514657.1 protein RIK isoform X1 [Cucurbita pepo subsp. pepo]

3.5e-161

72.27

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAA+MVEEMLRQGQN+ PLSFNSLNNDFK                             DQYINHIMAETGVTVSL GLGSGSTEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL
           +      ++          +D +S+E             +S VSSCKVYSAV PPQQVYGAVPPP          LQVYGAVPP PKVY+ VP PLL
Subjt:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL

Query:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL
        CSTPQ  +T V+SLGNEP+TSS SS ISSASPTIVS VSSVIPG APVI QGSILQ GL QSQSTAISY+KP IS GTNYNGYSGIYPQATPLQQVALAL
Subjt:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL

Query:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS
        KQVSSTT  VAVPNRSA SMSN+SV++DAEKEKRP+QRRKFQELPICVQGS ISNQDS+L  PSNKS  D+TVRNVSNMPAPRKLVQPSSN M PPRPRS
Subjt:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS

Query:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        MPPPPTPVKSTSTVK IVQDKELSLDT+K DVVSDTLVKLMEYG EEDDD EEGVESLNS NTTGG+A+RKPFWAV
Subjt:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV

XP_038901396.1 protein RIK isoform X1 [Benincasa hispida]

9.7e-180

77.71

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAA+MVEEMLRQGQNLAPLS+NSLNN+FK                             DQYINHIMAETGVTVSL GLGSGSTEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTVWLDGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESL
         +  +            S+ +   K+    L++       +S VSSCKVYSAVPPPQQVYGAVPPPLQVYGA+PPLPKVYS VP PL+CSTPQFTRVESL
Subjt:  AYSIMKQFVLTVWLDGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESL

Query:  GNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALKQVSSTTTPVAVPN
        GNEPT+SS SSLISSASPTIVSPVSSVIPGVAPV+A GS LQPGLPQSQSTAI YT+P ISGGTNYNGYSGIYPQATPLQQVALALKQVSSTTTPVAVPN
Subjt:  GNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALKQVSSTTTPVAVPN

Query:  RSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKSTDSTVRNVSNMPAPRKLVQPSSNGMA--PPRPRSMPPPPTPVKSTST
        RSALSMSNMSVN DAEKEK P+QRRKFQELP+CVQGSS+SNQDSEL NPSNKSTDS++RNVSNMPAPRKLVQPSSNGMA  PPRPRSMPPPPTPVKSTST
Subjt:  RSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKSTDSTVRNVSNMPAPRKLVQPSSNGMA--PPRPRSMPPPPTPVKSTST

Query:  VKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        VK IVQDKELSLDT+KHDVVSDTLVKLMEYGEEDDD EEGVESLN+NNT+G IANRKPFWAV
Subjt:  VKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVP0 Uncharacterized protein

2.4e-168

74.47

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAA+MVEEMLRQGQNLA LSF+ LNN+FK                             DQYINHIMAETGVTVSL GLG+G+TEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIM----------KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQ----------QVYGAVPPPLQVYGAVPPLPKVYSVVPHPL
         +  +           + +    +D +S+E             +S VSSCKVYSAVPPPQ          QVYGAVPPPLQVYGAVPPLPKVYS VP  L
Subjt:  AYSIM----------KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQ----------QVYGAVPPPLQVYGAVPPLPKVYSVVPHPL

Query:  LCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALK
        LCSTPQF RVESLGNEPTTSS SSLISSASPTIVSPVSSVIPGVAPVI+QGSILQ GLPQSQSTAISY KP ISGGTNYNGYSGIYPQATPLQQVALALK
Subjt:  LCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALK

Query:  QVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRSM
        QVSSTTTPVAVPNR ALS+SNM+VNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS NPSNK    TV++VSNMPAPRKLVQ SSNGM PP+PRSM
Subjt:  QVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRSM

Query:  PPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        PPPPTP KSTS VK IVQDKELSLDT+KHDVVSDTLVKLMEYG EDDD EEGVESLNS+NTTGGIANRKPFWAV
Subjt:  PPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV

A0A1S3CCJ5 protein RIK isoform X1

1.7e-161

70.93

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAASMVEEMLRQGQ+LAP SF+SLN +FK                             DQYINHI+AETGVTVSL GLG+GSTEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTVWL-DGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPL-----------------------
                 L ++L    S+ +   K+    L++       +S VSSCKVYSAVPPPQQVYGAVPPP QVYGAVPP                        
Subjt:  AYSIMKQFVLTVWL-DGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPL-----------------------

Query:  -------PKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGY
               PKVYS VP PLLCSTPQF RVESL NEPTTSS SSLISSASPTIVSPVSSVIPGVAPVIAQGSILQ GLPQSQSTAISYTKP ISGGTNYNGY
Subjt:  -------PKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGY

Query:  SGIYPQATPLQQVALALKQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPR
        SGIYPQATPLQQVALALKQVSSTTTPVAVPNR ALS+SNM VNSDAEKEKRPNQRRKFQELPICVQGSSI+NQDSELS NPSNK   ++V++VSNMPAPR
Subjt:  SGIYPQATPLQQVALALKQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPR

Query:  KLVQPSSNGMAPPRPRSMPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        KLV   SNGM PPRPRSMPPPPTPVK TSTVK I+QDKELS DT+KHDV+SDTLVKLMEYGEEDDD EEGVESLNS NTTG IA RKPFWAV
Subjt:  KLVQPSSNGMAPPRPRSMPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV

A0A5A7VGN4 Protein RIK isoform X1

1.7e-161

70.93

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAASMVEEMLRQGQ+LAP SF+SLN +FK                             DQYINHI+AETGVTVSL GLG+GSTEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTVWL-DGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPL-----------------------
                 L ++L    S+ +   K+    L++       +S VSSCKVYSAVPPPQQVYGAVPPP QVYGAVPP                        
Subjt:  AYSIMKQFVLTVWL-DGLSREICRVKSFNLLLLE-------LSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPL-----------------------

Query:  -------PKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGY
               PKVYS VP PLLCSTPQF RVESL NEPTTSS SSLISSASPTIVSPVSSVIPGVAPVIAQGSILQ GLPQSQSTAISYTKP ISGGTNYNGY
Subjt:  -------PKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGY

Query:  SGIYPQATPLQQVALALKQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPR
        SGIYPQATPLQQVALALKQVSSTTTPVAVPNR ALS+SNM VNSDAEKEKRPNQRRKFQELPICVQGSSI+NQDSELS NPSNK   ++V++VSNMPAPR
Subjt:  SGIYPQATPLQQVALALKQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-NPSNKSTDSTVRNVSNMPAPR

Query:  KLVQPSSNGMAPPRPRSMPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        KLV   SNGM PPRPRSMPPPPTPVK TSTVK I+QDKELS DT+KHDV+SDTLVKLMEYGEEDDD EEGVESLNS NTTG IA RKPFWAV
Subjt:  KLVQPSSNGMAPPRPRSMPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV

A0A6J1GTP6 protein RIK isoform X1

9.2e-160

71.64

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAA+MVEEMLRQGQN  PLSFNSLNNDFK                             DQYINHIMAETGVTVSL GLGSGSTEGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL
           +      ++          +D +S+E             +S VSSCKVYSAV PPQQVYGAVPPP          LQVYGAVPP PKVY+ VP PLL
Subjt:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL

Query:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL
        CSTPQ  +T V+SLGNE +TSS SS ISSASPTIVS VSSVIPG APVI QGSILQ GL QSQSTAISY+KP IS GTNYNGYSGIYPQATPLQQVALAL
Subjt:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL

Query:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS
        KQVSSTT  VAVPNRSA SMSN+SV++DAEKEKRP+QRRKFQELPICVQGS ISNQDS+L  PSNKS  D+TVRNVSNMPAPRKLVQPSSN M PPRPRS
Subjt:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS

Query:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        MPPPPTPVKSTSTVK IVQDKELSLDT+K D+VSDTLVKLMEYG EEDDD EEGVESLNS N+TGG+A+RKPFWAV
Subjt:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV

A0A6J1IWQ3 protein RIK isoform X1

1.2e-159

71.64

Show/hide

Query:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA
        MAERILAVDRAA+MVEEMLRQGQN+ PLSFNSLNNDFK                             DQYINHIMAETGVTVSL GLGSGS+EGACE   
Subjt:  MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFK-----------------------------DQYINHIMAETGVTVSLLGLGSGSTEGACEATA

Query:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL
           +      ++          +D +S+E             +S VSSCKVYSAV PPQQVYGAVPPP          LQVYGAVPP PKVY+ VP PLL
Subjt:  AYSIMKQFVLTV---------WLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPP----------LQVYGAVPPLPKVYSVVPHPLL

Query:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL
        CSTPQ  +T V+SLGNEP+TSS SS ISSASPTIVS VSSVIPG APVI QGSILQ G  QSQSTAISY+KP IS GTNYNGYSGIYPQATPLQQVALAL
Subjt:  CSTPQ--FTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALAL

Query:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS
        KQVSSTT  VAVPNRSA SMSN+SV++D EKEKRP+QRRKFQELPICVQGS ISNQDS+L  PSNKS  D+TVRNVSNMPAPRKLVQPSSN M PPRPRS
Subjt:  KQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPRPRS

Query:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV
        MPPPPTPVKSTSTVK IVQDKELSLDT+K DVVSDTLVKLMEYG EEDDD EEGVESLNS NTTGG+A+RKPFWAV
Subjt:  MPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYG-EEDDDLEEGVESLNSNNTTGGIANRKPFWAV

SwissProt top hits

e value

%identity

Alignment

Q32SG5 Protein RIK

6.2e-28

35.82

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Query:  AERILAVDRAASMVEEMLRQ---------------GQNLAPLSFN---------SLNNDFK-----DQYINHIMAETGVTVSLLGLGSGSTEGACEATAA
        AERI AVDRAASM+EE+L+Q               GQ + P S +         SLN   +     DQYINHIM ETGVTV L G  S +  G+C + A+
Subjt:  AERILAVDRAASMVEEMLRQ---------------GQNLAPLSFN---------SLNNDFK-----DQYINHIMAETGVTVSLLGLGSGSTEGACEATAA

Query:  YSIMKQFVLTVWLDGLSREICRVKSFNLL-----LLELSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESLGNE
           +  ++ ++ L  L  E  +V + NLL         S +SS KVY AVPPPQQ+   V       G    +   Y V P+ L  +T  F         
Subjt:  YSIMKQFVLTVWLDGLSREICRVKSFNLL-----LLELSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESLGNE

Query:  PTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALKQVSSTTTPVAVPNRSA
                    AS  +++PV  V P V   +  G+    G+P   + A  Y  P  +GG  Y+GY  IYPQATPLQQ+A  LK  SS+ T  AVP  S 
Subjt:  PTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPHISGGTNYNGYSGIYPQATPLQQVALALKQVSSTTTPVAVPNRSA

Query:  LSMSNMSVNS--DAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPR------------------
         +      NS  DAE +KR   RRKFQELP+  +G +  +Q+S+  +   K+  DS+    S+  AP K V P SNGM P                    
Subjt:  LSMSNMSVNS--DAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKS-TDSTVRNVSNMPAPRKLVQPSSNGMAPPR------------------

Query:  --------PRSMPPPP
                PRSMPPPP
Subjt:  --------PRSMPPPP

Q9LIA4 Protein RIK

4.0e-35

33.62

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Query:  ERILAVDRAASMVEEMLRQ---------GQNLAPLSFNSLNNDFK---------------DQYINHIMAETGVTVSLLGLGSGSTEG--ACEATAAYSIM
        ERILAVDRAA+M+EEM++Q         G     +    +   F+               DQYINHIM ETG TV L G GSGS E     EA     ++
Subjt:  ERILAVDRAASMVEEMLRQ---------GQNLAPLSFNSLNNDFK---------------DQYINHIMAETGVTVSLLGLGSGSTEG--ACEATAAYSIM

Query:  KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSL
                +D   R    +     +    S VSS KVY AVPPPQQ+    P   Q             +  + L+ S P      ++ + P T +TS  
Subjt:  KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSL

Query:  ISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPH--ISGGTNYNGYSGIYPQATPLQQVALALKQ-VSSTTTPVAVPNRSALSMSNM
                                    L P  P  QS  IS   P   ++GGT+Y+GY+GIYPQATPLQQVA  LKQ +S   + V     +A S+S  
Subjt:  ISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPH--ISGGTNYNGYSGIYPQATPLQQVALALKQ-VSSTTTPVAVPNRSALSMSNM

Query:  SVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-----NPSNKSTDS--TVRNVSNMPAPRKLVQPSSNGMAPPRPRSMPPPP------TPVKST
        S N+  E E+RP ++RKFQELP   +      Q SEL+      PS     S  + R+V   P P+ +  P S  M+PP  +SM PPP      +P+ S 
Subjt:  SVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-----NPSNKSTDS--TVRNVSNMPAPRKLVQPSSNGMAPPRPRSMPPPP------TPVKST

Query:  S-----------TVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNN
        S           T ++ +QD  +S+   K + V DTL+KLMEYG+++DD ++  E L + +
Subjt:  S-----------TVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNN

Arabidopsis top hits

e value

%identity

Alignment

AT3G29390.1 RS2-interacting KH protein

2.8e-36

33.62

Show/hide

Query:  ERILAVDRAASMVEEMLRQ---------GQNLAPLSFNSLNNDFK---------------DQYINHIMAETGVTVSLLGLGSGSTEG--ACEATAAYSIM
        ERILAVDRAA+M+EEM++Q         G     +    +   F+               DQYINHIM ETG TV L G GSGS E     EA     ++
Subjt:  ERILAVDRAASMVEEMLRQ---------GQNLAPLSFNSLNNDFK---------------DQYINHIMAETGVTVSLLGLGSGSTEG--ACEATAAYSIM

Query:  KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSL
                +D   R    +     +    S VSS KVY AVPPPQQ+    P   Q             +  + L+ S P      ++ + P T +TS  
Subjt:  KQFVLTVWLDGLSREICRVKSFNLLLLELSLVSSCKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSL

Query:  ISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPH--ISGGTNYNGYSGIYPQATPLQQVALALKQ-VSSTTTPVAVPNRSALSMSNM
                                    L P  P  QS  IS   P   ++GGT+Y+GY+GIYPQATPLQQVA  LKQ +S   + V     +A S+S  
Subjt:  ISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYTKPH--ISGGTNYNGYSGIYPQATPLQQVALALKQ-VSSTTTPVAVPNRSALSMSNM

Query:  SVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-----NPSNKSTDS--TVRNVSNMPAPRKLVQPSSNGMAPPRPRSMPPPP------TPVKST
        S N+  E E+RP ++RKFQELP   +      Q SEL+      PS     S  + R+V   P P+ +  P S  M+PP  +SM PPP      +P+ S 
Subjt:  SVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELS-----NPSNKSTDS--TVRNVSNMPAPRKLVQPSSNGMAPPRPRSMPPPP------TPVKST

Query:  S-----------TVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNN
        S           T ++ +QD  +S+   K + V DTL+KLMEYG+++DD ++  E L + +
Subjt:  S-----------TVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNN

Sequences

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CDS sequence

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ATGGCGGAAAGGATTTTAGCGGTTGATCGAGCTGCTTCCATGGTTGAAGAAATGCTGAGACAGGGTCAGAATTTGGCGCCATTGTCTTTTAATTCTTTAAACAACGACTT
CAAGGACCAGTATATAAATCACATAATGGCTGAAACAGGAGTAACTGTCTCTCTCCTGGGACTTGGTTCGGGAAGTACAGAAGGTGCATGTGAAGCAACTGCAGCTTATT
CTATCATGAAGCAATTTGTGTTGACAGTCTGGTTAGACGGGTTGTCCCGTGAGATTTGTCGAGTGAAATCGTTTAATTTGTTGTTACTTGAGTTGTCATTGGTTTCATCA
TGTAAGGTTTATAGTGCTGTTCCACCTCCACAGCAGGTTTATGGAGCTGTTCCACCTCCGCTCCAGGTCTATGGAGCTGTTCCACCTCTGCCAAAGGTTTATAGTGTTGT
TCCACATCCACTACTTTGTTCAACACCACAGTTCACGAGAGTTGAGAGCTTGGGAAATGAGCCGACTACAAGTTCAACTTCAAGTTTGATCTCGTCAGCTTCTCCTACCA
TAGTCTCTCCAGTTTCTTCAGTTATACCAGGAGTTGCTCCTGTCATCGCTCAAGGTTCAATATTACAACCTGGATTGCCACAGTCTCAATCAACCGCCATTAGTTATACC
AAGCCACATATATCTGGTGGGACAAACTATAATGGATATAGTGGAATATATCCTCAAGCGACGCCTTTGCAACAAGTTGCCCTAGCCCTTAAACAAGTATCTTCAACTAC
CACACCTGTAGCTGTCCCAAACAGGTCAGCACTGAGCATGTCAAATATGAGTGTTAACTCTGATGCAGAGAAAGAAAAACGCCCTAATCAGAGACGTAAATTTCAGGAGC
TGCCAATTTGTGTGCAGGGTTCCTCAATAAGCAATCAGGATTCAGAACTTTCGAACCCCTCAAACAAATCAACCGATTCCACTGTGAGGAATGTATCAAATATGCCAGCT
CCTAGAAAGCTAGTTCAACCTTCATCCAATGGAATGGCACCACCTCGACCACGATCCATGCCACCTCCACCCACACCAGTAAAATCTACATCAACAGTTAAGGCTATAGT
GCAAGATAAGGAACTTTCGTTGGACACGATGAAACATGATGTTGTCTCAGATACATTAGTGAAGCTAATGGAATATGGAGAAGAAGATGATGATTTAGAGGAAGGGGTTG
AATCATTGAACAGCAATAACACTACTGGTGGCATAGCAAATCGAAAACCTTTCTGGGCCGTGTAA

mRNA sequence

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Protein sequence

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MAERILAVDRAASMVEEMLRQGQNLAPLSFNSLNNDFKDQYINHIMAETGVTVSLLGLGSGSTEGACEATAAYSIMKQFVLTVWLDGLSREICRVKSFNLLLLELSLVSS
CKVYSAVPPPQQVYGAVPPPLQVYGAVPPLPKVYSVVPHPLLCSTPQFTRVESLGNEPTTSSTSSLISSASPTIVSPVSSVIPGVAPVIAQGSILQPGLPQSQSTAISYT
KPHISGGTNYNGYSGIYPQATPLQQVALALKQVSSTTTPVAVPNRSALSMSNMSVNSDAEKEKRPNQRRKFQELPICVQGSSISNQDSELSNPSNKSTDSTVRNVSNMPA
PRKLVQPSSNGMAPPRPRSMPPPPTPVKSTSTVKAIVQDKELSLDTMKHDVVSDTLVKLMEYGEEDDDLEEGVESLNSNNTTGGIANRKPFWAV

Lsi07G009950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome