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Lsi07G010360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G010360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:15717218..15717544
RNA-Seq ExpressionLsi07G010360
SyntenyLsi07G010360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052904.1 hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa]6.2e-3078.7Show/hide
Query:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGR-SKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS
        MDPITYERI+RR R SCRGFRL+SRRLSV KL++K GWLL RILN WRRSIV+IKK GR SKG S++ AQ  RL SFRRSNSFYAEAIADCLDFIKTSSS
Subjt:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGR-SKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS

Query:  SSSTSTST
        S ST  ST
Subjt:  SSSTSTST

KAE8637405.1 hypothetical protein CSA_023382 [Cucumis sativus]3.1e-2978.64Show/hide
Query:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGG-RSKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS
        MDPITYERI RR+R SCRGFRL+SRRLSV KLR+K GWLL RILN WRRSIVEIKK G  SKG S++AAQ  +L SFRRSNSFYAEAIADCLDFIKT+SS
Subjt:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGG-RSKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS

Query:  SSS
         S+
Subjt:  SSS

KAG6596289.1 hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2059.02Show/hide
Query:  MDPITYERIKRRRRG--SCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRS------IVEIKKGGRSKGCSSAAA---------QPRLSSFRRSNSFYA
        M+PITY+RI+RR  G   CRGF L SRR SV KLRAK  WLL RILN WRRS      I + ++GGRSK  ++A+A         + RL SFRRSNSFYA
Subjt:  MDPITYERIKRRRRG--SCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRS------IVEIKKGGRSKGCSSAAA---------QPRLSSFRRSNSFYA

Query:  EAIADCLDFIKTSSSSSSTSTS
        EAIADCLDFIK SS SS  ++S
Subjt:  EAIADCLDFIKTSSSSSSTSTS

KAG7027838.1 hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2059.02Show/hide
Query:  MDPITYERIKRRRRG--SCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRS------IVEIKKGGRSKGCSSAAA---------QPRLSSFRRSNSFYA
        M+PITY+RI+RR  G   CRGF L SRR SV KLRAK  WLL RILN WRRS      I + ++GGRSK  ++A+A         + RL SFRRSNSFYA
Subjt:  MDPITYERIKRRRRG--SCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRS------IVEIKKGGRSKGCSSAAA---------QPRLSSFRRSNSFYA

Query:  EAIADCLDFIKTSSSSSSTSTS
        EAIADCLDFIK SS SS  ++S
Subjt:  EAIADCLDFIKTSSSSSSTSTS

XP_022158286.1 uncharacterized protein LOC111024807 [Momordica charantia]4.6e-1759.62Show/hide
Query:  MDPITYERI----KRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCLDFIKTS
        M+PI+YERI     RRR  S RGFRL+SRR SV +LRAK   LL RILN WRRSI ++++  +++         RL SFRRSNSFYAEA+ADCLDFIKT+
Subjt:  MDPITYERI----KRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCLDFIKTS

Query:  SSSS
        +SSS
Subjt:  SSSS

TrEMBL top hitse value%identityAlignment
A0A0A0L3I7 Uncharacterized protein1.5e-2978.64Show/hide
Query:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGG-RSKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS
        MDPITYERI RR+R SCRGFRL+SRRLSV KLR+K GWLL RILN WRRSIVEIKK G  SKG S++AAQ  +L SFRRSNSFYAEAIADCLDFIKT+SS
Subjt:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGG-RSKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS

Query:  SSS
         S+
Subjt:  SSS

A0A165XTS4 Uncharacterized protein4.5e-1045.61Show/hide
Query:  ITYERIKRRRR---GSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWR------RSIVEIKKGGRSKGCSSAAAQP----RLSSFRRSNSFYAEAIADCL
        + Y R++  RR   G CRGFRL++RR SV++LRAK  +L + +   WR      R+I    +   S+   S  A P    RL SF RSNSFY+EAIADCL
Subjt:  ITYERIKRRRR---GSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWR------RSIVEIKKGGRSKGCSSAAAQP----RLSSFRRSNSFYAEAIADCL

Query:  DFIKTSSSSSSTST
        +FIK SS S   +T
Subjt:  DFIKTSSSSSSTST

A0A4S4EGV4 Uncharacterized protein5.8e-1045.87Show/hide
Query:  MDPITYERIKRRRRGSCRG----FRLSSRRLSVWKLRAKLGWLLRRILNSWRRS----IVEIKKG--GRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCL
        M  ++Y ++ RR   SCRG    FRL+ R+LSV++LRAK  +L  R+ + WR S    +  IKKG    S  CSS+     + +  RSNSFY+EAIADCL
Subjt:  MDPITYERIKRRRRGSCRG----FRLSSRRLSVWKLRAKLGWLLRRILNSWRRS----IVEIKKG--GRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCL

Query:  DFIKTSSSS
        +FIK  S S
Subjt:  DFIKTSSSS

A0A5A7UC85 Uncharacterized protein3.0e-3078.7Show/hide
Query:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGR-SKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS
        MDPITYERI+RR R SCRGFRL+SRRLSV KL++K GWLL RILN WRRSIV+IKK GR SKG S++ AQ  RL SFRRSNSFYAEAIADCLDFIKTSSS
Subjt:  MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGR-SKGCSSAAAQ-PRLSSFRRSNSFYAEAIADCLDFIKTSSS

Query:  SSSTSTST
        S ST  ST
Subjt:  SSSTSTST

A0A6J1E0I4 uncharacterized protein LOC1110248072.2e-1759.62Show/hide
Query:  MDPITYERI----KRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCLDFIKTS
        M+PI+YERI     RRR  S RGFRL+SRR SV +LRAK   LL RILN WRRSI ++++  +++         RL SFRRSNSFYAEA+ADCLDFIKT+
Subjt:  MDPITYERI----KRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCLDFIKTS

Query:  SSSS
        +SSS
Subjt:  SSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTATTACGTATGAGAGGATTAAGAGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGGCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGG
GTGGTTGTTGCGGCGGATCTTAAATTCCTGGCGACGTTCCATTGTTGAGATTAAGAAGGGAGGAAGATCAAAGGGTTGTTCTTCGGCGGCTGCGCAACCGAGGCTCAGCT
CCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCTACTTCCACTTCCACTTCCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCTATTACGTATGAGAGGATTAAGAGGCGGCGGCGGGGCTCCTGCAGAGGCTTCCGGCTGAGCTCCAGAAGACTGTCCGTGTGGAAGCTGCGGGCGAAGTTGGG
GTGGTTGTTGCGGCGGATCTTAAATTCCTGGCGACGTTCCATTGTTGAGATTAAGAAGGGAGGAAGATCAAAGGGTTGTTCTTCGGCGGCTGCGCAACCGAGGCTCAGCT
CCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCTCCTCCTCCTCCTCCTCTACTTCCACTTCCACTTCCATCTGA
Protein sequenceShow/hide protein sequence
MDPITYERIKRRRRGSCRGFRLSSRRLSVWKLRAKLGWLLRRILNSWRRSIVEIKKGGRSKGCSSAAAQPRLSSFRRSNSFYAEAIADCLDFIKTSSSSSSTSTSTSI