; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G010460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G010460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA mismatch repair protein MLH3
Genome locationchr07:15853078..15858005
RNA-Seq ExpressionLsi07G010460
SyntenyLsi07G010460
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0032300 - mismatch repair complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0030983 - mismatched DNA binding (molecular function)
InterPro domainsIPR028830 - DNA mismatch repair protein Mlh3
IPR037198 - MutL, C-terminal domain superfamily
IPR038973 - DNA mismatch repair protein MutL/Mlh/Pms
IPR042120 - MutL, C-terminal domain, dimerisation subdomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052911.1 DNA mismatch repair protein MLH3 isoform X2 [Cucumis melo var. makuwa]3.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

XP_008448458.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Cucumis melo]3.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

XP_008448461.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Cucumis melo]3.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

XP_016900669.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X4 [Cucumis melo]3.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

XP_016900671.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X8 [Cucumis melo]3.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

TrEMBL top hitse value%identityAlignment
A0A1S3BJQ0 DNA mismatch repair protein MLH3 isoform X11.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

A0A1S3BKL4 DNA mismatch repair protein MLH3 isoform X21.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

A0A1S4DXG1 DNA mismatch repair protein MLH3 isoform X81.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

A0A1S4DXG5 DNA mismatch repair protein MLH3 isoform X31.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

A0A5A7UH95 DNA mismatch repair protein MLH3 isoform X21.9e-6695.56Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL
        EI GKSGSNGTWNGLG+HELSIERMLQRLSSAE L
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAESL

SwissProt top hitse value%identityAlignment
F4JN26 DNA mismatch repair protein MLH31.5e-4972.39Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFL QLADTDGSST+PPSVLRVLNSKACRGAIMFGDSLLPSECSLI++ LKQTSLCFQCAHGRPTTVPLV+L+ALHKQI +L
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAES
                   W+GL + E++++R   RL +A+S
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAES

P54280 DNA mismatch repair protein pms14.3e-0735.96Show/hide
Query:  TVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLE
        +VP    V     DLLE +  L++          + R+L SKACR ++M G +L  SE + IV  L + S  + C HGRPT   L+ L+
Subjt:  TVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLE

Q12083 DNA mismatch repair protein MLH38.3e-1146.77Show/hide
Query:  SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLE
        SS +P     +LNSKACR A+MFGD L   EC +++ +L +    F+CAHGRP+ VP+  L+
Subjt:  SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLE

Q941I6 DNA mismatch repair protein PMS19.5e-0731.13Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDG-------------SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPL
        ++ +P    +     DL + +  L D  G              S  P  V  +L S+ACR ++M GD L  +E   IVE L      + C HGRPT   L
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDG-------------SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPL

Query:  VNLEAL
        V+L  L
Subjt:  VNLEAL

Q9UHC1 DNA mismatch repair protein Mlh32.2e-1140.35Show/hide
Query:  EFLHQLADTDG-SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEAL--HKQIK-ELEILGKSGSNGTWNG
        E L  L  T G   T+P +V +VL S+AC GAI F D L   E   ++E L    L FQCAHGRP+ +PL +++ L   KQIK  L  L K      W  
Subjt:  EFLHQLADTDG-SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEAL--HKQIK-ELEILGKSGSNGTWNG

Query:  LGQHELSIERMLQR
         G+ E    + LQ+
Subjt:  LGQHELSIERMLQR

Arabidopsis top hitse value%identityAlignment
AT4G02460.1 DNA mismatch repair protein, putative6.8e-0831.13Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDG-------------SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPL
        ++ +P    +     DL + +  L D  G              S  P  V  +L S+ACR ++M GD L  +E   IVE L      + C HGRPT   L
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDG-------------SSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPL

Query:  VNLEAL
        V+L  L
Subjt:  VNLEAL

AT4G35520.1 MUTL protein homolog 31.1e-5072.39Show/hide
Query:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL
        +  VPCILGVNLSDVDLLEFL QLADTDGSST+PPSVLRVLNSKACRGAIMFGDSLLPSECSLI++ LKQTSLCFQCAHGRPTTVPLV+L+ALHKQI +L
Subjt:  MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKEL

Query:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAES
                   W+GL + E++++R   RL +A+S
Subjt:  EILGKSGSNGTWNGLGQHELSIERMLQRLSSAES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTGTACCCTGCATATTAGGGGTTAATTTATCAGATGTAGATCTTCTGGAGTTTCTTCATCAGCTTGCTGATACAGATGGCTCATCAACAATGCCACCATCCGT
ACTTCGAGTTCTTAATTCAAAGGCCTGCAGAGGTGCAATTATGTTTGGAGACTCTTTGTTACCTTCAGAGTGCTCCCTCATTGTTGAAGAACTGAAGCAGACTTCTCTGT
GTTTCCAATGTGCCCATGGACGGCCAACGACAGTTCCTCTTGTGAACTTGGAGGCATTGCATAAGCAGATAAAGGAGCTGGAAATACTGGGCAAAAGTGGTTCAAATGGA
ACATGGAATGGTCTGGGACAACACGAGCTGAGCATAGAAAGGATGTTGCAGCGCTTGAGTTCGGCCGAAAGTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAACTGTACCCTGCATATTAGGGGTTAATTTATCAGATGTAGATCTTCTGGAGTTTCTTCATCAGCTTGCTGATACAGATGGCTCATCAACAATGCCACCATCCGT
ACTTCGAGTTCTTAATTCAAAGGCCTGCAGAGGTGCAATTATGTTTGGAGACTCTTTGTTACCTTCAGAGTGCTCCCTCATTGTTGAAGAACTGAAGCAGACTTCTCTGT
GTTTCCAATGTGCCCATGGACGGCCAACGACAGTTCCTCTTGTGAACTTGGAGGCATTGCATAAGCAGATAAAGGAGCTGGAAATACTGGGCAAAAGTGGTTCAAATGGA
ACATGGAATGGTCTGGGACAACACGAGCTGAGCATAGAAAGGATGTTGCAGCGCTTGAGTTCGGCCGAAAGTTTATAGTACTCCTGGGAAATGCTGCCTTTTCATCGAGG
AGACTAATTGCCCAGGGGCGGAAATACCAGTCTGCAGAAGATAATGGATTGAGTAGCATTGTTAGATCATGTATAGAACCAGAAGTTGGCGATGATGATTTGTCAAAAAA
GAGCAGTGTTTCTGTAGTTTAGGTTTCCTTGGAGTTTTGGTTGTAATTCTTCCAATAAACATTATCTGCCCTCCATCTAAATATATTCTTTTGCAATATGGTGAATAAAG
CTAAATGCATATATGCTTCTTAAAAGATTACTGAACGAA
Protein sequenceShow/hide protein sequence
MQTVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIKELEILGKSGSNG
TWNGLGQHELSIERMLQRLSSAESL