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Lsi07G010510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G010510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRab escort protein 1
Genome locationchr07:15894771..15902810
RNA-Seq ExpressionLsi07G010510
SyntenyLsi07G010510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052917.1 rab proteins geranylgeranyltransferase component A 2 [Cucumis melo var. makuwa]8.9e-0585.71Show/hide
Query:  LGQFGSVNFTPMPDGNLNYDDLLNATFE
        +GQFG+V+FTPMPDGNLNYDDLL+ATFE
Subjt:  LGQFGSVNFTPMPDGNLNYDDLLNATFE
KAG6577815.1 Rab escort protein 1, partial [Cucurbita argyrosperma subsp. sororia]8.9e-0588.89Show/hide
Query:  GQFGSVNFTPMPDGNLNYDDLLNATFE
        GQFG V+FTPMPDGNLNYDDL+NATFE
Subjt:  GQFGSVNFTPMPDGNLNYDDLLNATFE
XP_008449158.1 PREDICTED: rab proteins geranylgeranyltransferase component A 1 [Cucumis melo]2.5e-1561.45Show/hide
Query:  AYCSIVPLQLNKYSKLLGSF--GESFKDKFDDLANSVVVVNLLVSVGSQFVCYIVLGQFGSVNFTPMPDGNLNYDDLLNATFE
        A+C    ++   Y   +GS    ESFKDKFDDLA+S VVVNLLVSVG         GQFG+V+FTPMPDGNLNYDDLL+ATFE
Subjt:  AYCSIVPLQLNKYSKLLGSF--GESFKDKFDDLANSVVVVNLLVSVGSQFVCYIVLGQFGSVNFTPMPDGNLNYDDLLNATFE
XP_023007630.1 rab escort protein 1 [Cucurbita maxima]5.2e-0592.59Show/hide
Query:  GQFGSVNFTPMPDGNLNYDDLLNATFE
        GQFG V+FTPMPDGNLNYDDLLNATFE
Subjt:  GQFGSVNFTPMPDGNLNYDDLLNATFE
XP_038901467.1 rab escort protein 1 [Benincasa hispida]1.4e-0596.3Show/hide
Query:  GQFGSVNFTPMPDGNLNYDDLLNATFE
        GQFGSV+FTPMPDGNLNYDDLLNATFE
Subjt:  GQFGSVNFTPMPDGNLNYDDLLNATFE
TrEMBL top hitse value%identityAlignment
A0A0A0L0Y1 Rab escort protein 14.3e-0585.71Show/hide
Query:  LGQFGSVNFTPMPDGNLNYDDLLNATFE
        +GQFG+V+FTPMPDG+LNYDDLLNATFE
Subjt:  LGQFGSVNFTPMPDGNLNYDDLLNATFE
A0A1S3BM21 rab proteins geranylgeranyltransferase component A 11.2e-1561.45Show/hide
Query:  AYCSIVPLQLNKYSKLLGSF--GESFKDKFDDLANSVVVVNLLVSVGSQFVCYIVLGQFGSVNFTPMPDGNLNYDDLLNATFE
        A+C    ++   Y   +GS    ESFKDKFDDLA+S VVVNLLVSVG         GQFG+V+FTPMPDGNLNYDDLL+ATFE
Subjt:  AYCSIVPLQLNKYSKLLGSF--GESFKDKFDDLANSVVVVNLLVSVGSQFVCYIVLGQFGSVNFTPMPDGNLNYDDLLNATFE
A0A5A7UEH7 Rab escort protein 14.3e-0585.71Show/hide
Query:  LGQFGSVNFTPMPDGNLNYDDLLNATFE
        +GQFG+V+FTPMPDGNLNYDDLL+ATFE
Subjt:  LGQFGSVNFTPMPDGNLNYDDLLNATFE
A0A6J1EBP1 Rab escort protein 14.3e-0588.89Show/hide
Query:  GQFGSVNFTPMPDGNLNYDDLLNATFE
        GQFG V+FTPMPDGNLNYDDL+NATFE
Subjt:  GQFGSVNFTPMPDGNLNYDDLLNATFE
A0A6J1L3I4 Rab escort protein 12.5e-0592.59Show/hide
Query:  GQFGSVNFTPMPDGNLNYDDLLNATFE
        GQFG V+FTPMPDGNLNYDDLLNATFE
Subjt:  GQFGSVNFTPMPDGNLNYDDLLNATFE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGATGACTCTGACATCATTGTGCTCAAGAGGAAGAACTTGCATGATGATTGGTATAAAATTCTAATGACAATCCAAGCCGACGTTACTGCCTACTGCTCGATTGT
TCCCTTACAGCTTAACAAGTATAGTAAGTTGCTTGGCTCCTTTGGTGAATCCTTTAAAGATAAATTTGATGATCTTGCTAATTCTGTTGTGGTGGTTAATTTGTTGGTTT
CTGTTGGATCGCAATTCGTGTGCTATATTGTATTGGGTCAATTTGGATCAGTGAACTTCACTCCCATGCCTGATGGAAATCTGAACTACGATGACCTTTTGAATGCAACT
TTTGAGGACTCAATCAAATACAGGATAATGCAAGACCATGCATGCGACAGGGTTATGTATGCAAAGACAAGGGCTTCCTTAAAGAATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGATGACTCTGACATCATTGTGCTCAAGAGGAAGAACTTGCATGATGATTGGTATAAAATTCTAATGACAATCCAAGCCGACGTTACTGCCTACTGCTCGATTGT
TCCCTTACAGCTTAACAAGTATAGTAAGTTGCTTGGCTCCTTTGGTGAATCCTTTAAAGATAAATTTGATGATCTTGCTAATTCTGTTGTGGTGGTTAATTTGTTGGTTT
CTGTTGGATCGCAATTCGTGTGCTATATTGTATTGGGTCAATTTGGATCAGTGAACTTCACTCCCATGCCTGATGGAAATCTGAACTACGATGACCTTTTGAATGCAACT
TTTGAGGACTCAATCAAATACAGGATAATGCAAGACCATGCATGCGACAGGGTTATGTATGCAAAGACAAGGGCTTCCTTAAAGAATGCTTAAAGAATTTGAGGTGGATT
TCCTAATGTTGTACACTATATATGTTCAACACTCCATGTTATACAAGTTCAAATTATATGATGCATTCTCCTAAATGGGAAGAAACCGTAACTTTCTTGAGGTTTGTTAT
CTGTATGCATAGCTATGCTGCGGTCTCCGGAATGTTATTATTTTATTTTCATTGATATTGTTATGGTCTTATTTAACCAGACTGGGCAATATAAACATTCAAACGCTTGA
GTTTCATCAGGTAAGAAGGCCCTTTCGTTAAGGCGAGCTTATGAAGGAACATAAGATGTTCTAATATTTTCATTGTGGGAACACAGTTAGAATGTTATCTTTAATTTGCC
ACAATGTTTGATAGTCAAAGATTTTTCAACTTGGTGTATGCTTACACGAATCTTATGATAATATTGGCATAGATTGTAAGAGCACAAGTCAAGTCAGTCAGCTTTACCCT
TTTTCTATTGTGATTTGTCAATGAGAACAGGCTTCCTTGCAACAACCATTTATTTTTTTCATTTATACGAGTTGCTTCCTTACAGTTTATTTAAA
Protein sequenceShow/hide protein sequence
MTDDSDIIVLKRKNLHDDWYKILMTIQADVTAYCSIVPLQLNKYSKLLGSFGESFKDKFDDLANSVVVVNLLVSVGSQFVCYIVLGQFGSVNFTPMPDGNLNYDDLLNAT
FEDSIKYRIMQDHACDRVMYAKTRASLKNA