CuGenDBv2

Gene ID	Lsi07G010540
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	chr07:15921358..15922356
RNA-Seq Expression	Lsi07G010540
Synteny	Lsi07G010540
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146176.1 uncharacterized protein LOC101204142 [Cucumis sativus]

1.0e-33

93.1

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Query:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        ME EGIV+HRSSIAAPFIF IVIGFQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

9.1e-35

95.4

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Query:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        MEAEGIV+H SSIAAPFIF IVIGFQFLARWLEHLKKGGSNSQVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

XP_022923433.1 uncharacterized protein LOC111431128 [Cucurbita moschata]

4.5e-34

95.35

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Query:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        EAEGIV+HRSSIAAP IFL+VI FQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

XP_023007643.1 uncharacterized protein LOC111500212 [Cucurbita maxima]

3.5e-34

96.51

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Query:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        EAEGIV+HRSSIAAP IFLIVI FQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

XP_023552250.1 uncharacterized protein LOC111809975 [Cucurbita pepo subsp. pepo]

7.7e-34

94.19

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Query:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        EAEGIV+HRSS+AAP IFL+VI FQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4T9 Uncharacterized protein

4.9e-34

93.1

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Query:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        ME EGIV+HRSSIAAPFIF IVIGFQFLA+WLEHLKK GSNSQVEMELRKSIKQLL+EASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

A0A1S3BKE1 uncharacterized protein LOC103490650

4.4e-35

95.4

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Query:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        MEAEGIV+H SSIAAPFIF IVIGFQFLARWLEHLKKGGSNSQVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

A0A6J1E9M6 uncharacterized protein LOC111431128

2.2e-34

95.35

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Query:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        EAEGIV+HRSSIAAP IFL+VI FQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

A0A6J1I7A9 uncharacterized protein LOC111470261

6.6e-31

88.51

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Query:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        MEAE IV+HR+SI AP IFLIVI FQFLA WL+HLKK GSN+QVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

A0A6J1L884 uncharacterized protein LOC111500212

1.7e-34

96.51

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Query:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
        EAEGIV+HRSSIAAP IFLIVI FQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN
Subjt:  EAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELAN

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

2.7e-21

62.79

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Query:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELA
        ME E +++ R  +AAP  F++V+ FQ L++WL+ LKK GS +  E ELR  IKQLLREAS LSQP+TFAQAAKLRR AA KEKELA
Subjt:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELA

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

1.9e-22

62.79

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Query:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELA
        ME E +++ R  +AAP  F++V+ FQ L++WL+ LKK GS +  E ELR  IKQLLREAS LSQP+TFAQAAKLRR AA KEKELA
Subjt:  MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELA

Sequences

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CDS sequence

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ATGGAAGCGGAAGGAATCGTACAGCATCGAAGCTCGATTGCCGCTCCATTCATTTTTTTGATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAA
GGGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAAC
TTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAATTGTGAGGCTAATTAA

mRNA sequence

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GTTTTGTTACTCCACGAATTAGGCTGGGCCTTGGGTTTTGGGCCTTCGATTTTGAGACCTTCTGCTGAAGCCCATTTGTTGATGTTCGGAGCCCAATTTCGATCCCAACT
TCTTCCTGAATAACCTCCGTCGTATTGCGACGACGAACGGAGTTTTTTGGTTTGATTAATTCACTGTGGTGGCAGAAAAATCCTCCGGAAATGGAAGCGGAAGGAATCGT
ACAGCATCGAAGCTCGATTGCCGCTCCATTCATTTTTTTGATCGTTATCGGTTTTCAGTTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGGAGGTTCCAACAGCCAGG
TGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCTCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCT
AAGGAGAAGGAGCTGGCAAATTGTGAGGCTAATTAA

Protein sequence

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MEAEGIVQHRSSIAAPFIFLIVIGFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANCEAN

Lsi07G010540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome