; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G010710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G010710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:16076036..16078129
RNA-Seq ExpressionLsi07G010710
SyntenyLsi07G010710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038903246.1 uncharacterized protein LOC120089891 isoform X1 [Benincasa hispida]1.1e-6071.74Show/hide
Query:  MNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAYTSSSLNRPLQIDLEVEGDEFSNGINLLSCSSILRVVGCDLEGKIRERRQRASVSMNAAWQRRNGRR
        MNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAY SSS NRPLQIDLEVEGDEFSNG NLLSCSSILRVVG DLEGK+R RR +A VSMNA WQRRN RR
Subjt:  MNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAYTSSSLNRPLQIDLEVEGDEFSNGINLLSCSSILRVVGCDLEGKIRERRQRASVSMNAAWQRRNGRR

Query:  ECPFFAQKTEKDTSRRQGSCLISLDQIARKKMEERESWRRKRDRK---KQTIKKEVTTLNLYIENKWIEEEDKAFKDLSCDRTV
        ECP   +K  K+        L        KK   RESWR++RDR    K+       TLNLYIENKWIEEEDKAFKD SCDRTV
Subjt:  ECPFFAQKTEKDTSRRQGSCLISLDQIARKKMEERESWRRKRDRK---KQTIKKEVTTLNLYIENKWIEEEDKAFKDLSCDRTV
XP_038903247.1 uncharacterized protein LOC120089891 isoform X2 [Benincasa hispida]1.1e-6071.74Show/hide
Query:  MNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAYTSSSLNRPLQIDLEVEGDEFSNGINLLSCSSILRVVGCDLEGKIRERRQRASVSMNAAWQRRNGRR
        MNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAY SSS NRPLQIDLEVEGDEFSNG NLLSCSSILRVVG DLEGK+R RR +A VSMNA WQRRN RR
Subjt:  MNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAYTSSSLNRPLQIDLEVEGDEFSNGINLLSCSSILRVVGCDLEGKIRERRQRASVSMNAAWQRRNGRR

Query:  ECPFFAQKTEKDTSRRQGSCLISLDQIARKKMEERESWRRKRDRK---KQTIKKEVTTLNLYIENKWIEEEDKAFKDLSCDRTV
        ECP   +K  K+        L        KK   RESWR++RDR    K+       TLNLYIENKWIEEEDKAFKD SCDRTV
Subjt:  ECPFFAQKTEKDTSRRQGSCLISLDQIARKKMEERESWRRKRDRK---KQTIKKEVTTLNLYIENKWIEEEDKAFKDLSCDRTV
TrEMBL top hitse value%identityAlignment
A0A0A0L1K1 Uncharacterized protein5.6e-5087.4Show/hide
Query:  RRDGDLDSLDESIRFSRSFALLMRSISVLPSSSFFSERIAELELVPVSKSFMNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAYTSSSLNRPLQIDLEV
        RR GDLDS  E I FSRSFALLMRSISV PSSS FSERIAELEL  VSKSFMNPST+SSTHFRFWCLDK+CLVDAIWRSSSMEAY SSS N+PLQIDLEV
Subjt:  RRDGDLDSLDESIRFSRSFALLMRSISVLPSSSFFSERIAELELVPVSKSFMNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAYTSSSLNRPLQIDLEV

Query:  EGDEFSNGINLLSCSSILRVVGCDLEG
        EGDEFSNG NLLSCSSILRVVG DLEG
Subjt:  EGDEFSNGINLLSCSSILRVVGCDLEG
A0A0A0L4V1 Uncharacterized protein3.7e-0944.14Show/hide
Query:  MNAAWQRRNGRRECPFFAQKTEKDTS---------------RRQGSCLIS-LDQIARKKMEERESWRRKRDRKKQTIKKEVTTLN--LYIENKWIEEEDK
        MNAA QRRNGRRECPF  +K   +++               R++   L++       KK    ESW +KRDRK+ + ++  T  N  L  ENKWIEEEDK
Subjt:  MNAAWQRRNGRRECPFFAQKTEKDTS---------------RRQGSCLIS-LDQIARKKMEERESWRRKRDRKKQTIKKEVTTLN--LYIENKWIEEEDK

Query:  AFKDLSCDRTV
         FK L CDRTV
Subjt:  AFKDLSCDRTV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGCGTAGAGATGGAGATCTTGATTCATTAGATGAGTCGATCCGATTTTCTCGTTCATTTGCTTTGTTGATGAGATCAATTTCAGTGCTTCCTTCTTCGTCTTT
TTTCTCAGAGCGGATTGCAGAGCTTGAGCTTGTTCCTGTGTCTAAAAGCTTCATGAATCCATCGACCAATTCGTCCACCCATTTCCGGTTCTGGTGTCTCGATAAGAGCT
GCTTGGTGGATGCCATTTGGAGAAGCTCATCCATGGAAGCGTATACATCGTCCAGTCTCAACAGGCCATTGCAGATTGACTTGGAGGTTGAAGGAGATGAGTTCTCCAAT
GGCATCAACTTGCTCAGTTGCTCTTCAATTCTGAGAGTGGTGGGATGTGATCTGGAAGGGAAGATAAGAGAGAGGAGACAACGAGCGTCGGTTTCAATGAATGCAGCTTG
GCAGCGGAGAAATGGCCGGCGTGAGTGTCCTTTTTTTGCCCAAAAAACTGAGAAAGATACAAGCAGGAGGCAAGGGAGCTGCTTAATTTCTTTGGATCAAATTGCACGAA
AAAAGATGGAAGAGAGAGAATCTTGGAGGCGAAAAAGGGACAGAAAGAAACAGACTATTAAAAAGGAGGTCACAACACTGAACTTGTACATTGAAAACAAATGGATAGAG
GAAGAAGACAAGGCCTTCAAGGATCTATCATGTGACCGTACAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGCGTAGAGATGGAGATCTTGATTCATTAGATGAGTCGATCCGATTTTCTCGTTCATTTGCTTTGTTGATGAGATCAATTTCAGTGCTTCCTTCTTCGTCTTT
TTTCTCAGAGCGGATTGCAGAGCTTGAGCTTGTTCCTGTGTCTAAAAGCTTCATGAATCCATCGACCAATTCGTCCACCCATTTCCGGTTCTGGTGTCTCGATAAGAGCT
GCTTGGTGGATGCCATTTGGAGAAGCTCATCCATGGAAGCGTATACATCGTCCAGTCTCAACAGGCCATTGCAGATTGACTTGGAGGTTGAAGGAGATGAGTTCTCCAAT
GGCATCAACTTGCTCAGTTGCTCTTCAATTCTGAGAGTGGTGGGATGTGATCTGGAAGGGAAGATAAGAGAGAGGAGACAACGAGCGTCGGTTTCAATGAATGCAGCTTG
GCAGCGGAGAAATGGCCGGCGTGAGTGTCCTTTTTTTGCCCAAAAAACTGAGAAAGATACAAGCAGGAGGCAAGGGAGCTGCTTAATTTCTTTGGATCAAATTGCACGAA
AAAAGATGGAAGAGAGAGAATCTTGGAGGCGAAAAAGGGACAGAAAGAAACAGACTATTAAAAAGGAGGTCACAACACTGAACTTGTACATTGAAAACAAATGGATAGAG
GAAGAAGACAAGGCCTTCAAGGATCTATCATGTGACCGTACAGTTTAA
Protein sequenceShow/hide protein sequence
MEMRRDGDLDSLDESIRFSRSFALLMRSISVLPSSSFFSERIAELELVPVSKSFMNPSTNSSTHFRFWCLDKSCLVDAIWRSSSMEAYTSSSLNRPLQIDLEVEGDEFSN
GINLLSCSSILRVVGCDLEGKIRERRQRASVSMNAAWQRRNGRRECPFFAQKTEKDTSRRQGSCLISLDQIARKKMEERESWRRKRDRKKQTIKKEVTTLNLYIENKWIE
EEDKAFKDLSCDRTV