; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G010850 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G010850
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type domain-containing protein
Genome locationchr07:16251991..16252419
RNA-Seq ExpressionLsi07G010850
SyntenyLsi07G010850
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052944.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa]2.2e-5979.47Show/hide
Query:  MVFNKVFFFLIYNNFIGFRSKP-RFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDN------GVGTSVLPCLHEFHKVC
        MVFNKVFFF  YNNFIGFRS+P RFKQ ATPLPH G+SSLRP+  DDCT++ALS+ EKA E ETCCVCLSSMGN D       G GTSVLPCLHEFHKVC
Subjt:  MVFNKVFFFLIYNNFIGFRSKP-RFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDN------GVGTSVLPCLHEFHKVC

Query:  VDRWFEECRRTCPICRYSME--GGERHEDGTNQILTDEMVIWFSSFHTSGF
        V+RWFEECRRTCPICRYSME  GG  HED TNQILTDEMVIWFSSFHTSGF
Subjt:  VDRWFEECRRTCPICRYSME--GGERHEDGTNQILTDEMVIWFSSFHTSGF

KAE8649999.1 hypothetical protein Csa_010276, partial [Cucumis sativus]1.7e-5981.29Show/hide
Query:  FFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNR----DNGVGTSVLPCLHEFHKVCVDRWFEECRR
        FF  YNN IGFRS+PRFKQ ATPLP SG+SSLRP+  DDCT++ALS+ EKA E ETCCVCLSSMGN     D GVGTSVLPCLHEFHKVCV+RWFEECRR
Subjt:  FFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNR----DNGVGTSVLPCLHEFHKVCVDRWFEECRR

Query:  TCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF
        TCPICRYSMEGG  HED TNQILTDEMVIWFSSFHTSGF
Subjt:  TCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF

KAG6577791.1 Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5777.24Show/hide
Query:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGN--RDNGVGTSVLPCLHEFHKVCVDRWF
        MVFNK+FFF  YNN IGFR+ P  KQ ATPLP S  SSLRP+TPDDC V ALS+PEKA E ETCCVCLS MGN  +D G+GTSVLPC HEFHK+C+DRWF
Subjt:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGN--RDNGVGTSVLPCLHEFHKVCVDRWF

Query:  EECRRTCPICRYSME-GGERHEDGTNQILTDEMVIWFSSFHTSGF
        EECRRTCPICRYSME GG  HEDG+N++LTDEMVIWFSSFHTSGF
Subjt:  EECRRTCPICRYSME-GGERHEDGTNQILTDEMVIWFSSFHTSGF

KAG7015830.1 Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-5777.24Show/hide
Query:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGN--RDNGVGTSVLPCLHEFHKVCVDRWF
        MVFNK+FFF  YNN IGFR+ P  KQ ATPLP S  SSLRP TPDDC V ALS+PEKA E ETCCVCLS MGN  +D G+GTSVLPC HEFHK+C+DRWF
Subjt:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGN--RDNGVGTSVLPCLHEFHKVCVDRWF

Query:  EECRRTCPICRYSME-GGERHEDGTNQILTDEMVIWFSSFHTSGF
        EECRRTCPICRYSME GG  HEDG+N++LTDEMVIWFSSFHTSGF
Subjt:  EECRRTCPICRYSME-GGERHEDGTNQILTDEMVIWFSSFHTSGF

XP_038906276.1 E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]5.6e-6383.11Show/hide
Query:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGN----RDNGVG--TSVLPCLHEFHKVCV
        MVFNKVFFF  YNNF+GFRS+ R KQ ATPLPH G+ SLRPITPDDC +V LS+PEKA E ETCCVCLSSMGN    RD GVG  TSVLPCLHEFHKVCV
Subjt:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGN----RDNGVG--TSVLPCLHEFHKVCV

Query:  DRWFEECRRTCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF
        DRWFEECRRTCPICRYSMEGG  HEDGTNQILTDEMVIWFSSFHTSGF
Subjt:  DRWFEECRRTCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W7 RING-type domain-containing protein3.0e-6281.51Show/hide
Query:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNR----DNGVGTSVLPCLHEFHKVCVDR
        M+FNKVFFF  YNN IGFRS+PRFKQ ATPLP SG+SSLRP+  DDCT++ALS+ EKA E ETCCVCLSSMGN     D GVGTSVLPCLHEFHKVCV+R
Subjt:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNR----DNGVGTSVLPCLHEFHKVCVDR

Query:  WFEECRRTCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF
        WFEECRRTCPICRYSMEGG  HED TNQILTDEMVIWFSSFHTSGF
Subjt:  WFEECRRTCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF

A0A5D3CJ45 E3 ubiquitin-protein ligase RNF131.1e-5979.47Show/hide
Query:  MVFNKVFFFLIYNNFIGFRSKP-RFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDN------GVGTSVLPCLHEFHKVC
        MVFNKVFFF  YNNFIGFRS+P RFKQ ATPLPH G+SSLRP+  DDCT++ALS+ EKA E ETCCVCLSSMGN D       G GTSVLPCLHEFHKVC
Subjt:  MVFNKVFFFLIYNNFIGFRSKP-RFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDN------GVGTSVLPCLHEFHKVC

Query:  VDRWFEECRRTCPICRYSME--GGERHEDGTNQILTDEMVIWFSSFHTSGF
        V+RWFEECRRTCPICRYSME  GG  HED TNQILTDEMVIWFSSFHTSGF
Subjt:  VDRWFEECRRTCPICRYSME--GGERHEDGTNQILTDEMVIWFSSFHTSGF

A0A6A1UIA7 Protein preY, mitochondrial9.3e-2445.93Show/hide
Query:  IGFRSKPRFKQAATPLPHSGHSSLR----PITPDDCTVVALSNPEKAFE----DETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPI
        IG R++P  K+A    P S +S +         +D T+ A  +   + E    ++ CCVCLS +     G  T +LPCLHEFHKVCVDRWF  CR+TCP+
Subjt:  IGFRSKPRFKQAATPLPHSGHSSLR----PITPDDCTVVALSNPEKAFE----DETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPI

Query:  CRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF
        CR+SM G +       + LTDEMVIWFSSFH +GF
Subjt:  CRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF

A0A6J1CW69 E3 ubiquitin-protein ligase SDIR1-like1.5e-4266.67Show/hide
Query:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTV---VALSNPEKAFEDE-TCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDR
        MVFN+VFFF  + NFIGFR +P+ KQ  T LPH G S+LR +  D+  +   V LS+  KA E E  CCVCLSS+   + G+ TSVLPCLHEFHKVCVDR
Subjt:  MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTV---VALSNPEKAFEDE-TCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDR

Query:  WFEECRRTCPICRYSMEG-GERHEDGTNQILTDEMVIWFSSFHTSGF
        WFEE RRTCPICRYSMEG G+ +E+GT QILTDEMVIWFSSFHTSGF
Subjt:  WFEECRRTCPICRYSMEG-GERHEDGTNQILTDEMVIWFSSFHTSGF

A0A7N2R4T7 RING-type domain-containing protein1.9e-2447.62Show/hide
Query:  MVFNKVFFFLIYNNFIG----FRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDR
        MVF K+  F IYN+ IG     R++P F +A         S L  ++ D+  V      E   E E CCVCLS +      + T  LPCLHEFHK+CVDR
Subjt:  MVFNKVFFFLIYNNFIG----FRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDR

Query:  WFEE-CRRTCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF
        WF   CR+TCP+CR+SM G ++    T Q+LTDEMVIWFSSFH +GF
Subjt:  WFEE-CRRTCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFHTSGF

SwissProt top hitse value%identityAlignment
F4HZZ5 Receptor homology region, transmembrane domain- and RING domain-containing protein 51.5e-0730.61Show/hide
Query:  RFKQAATPLPHSGHS---SLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTS--VLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGG
        + +Q+   LPH G       R +     T V     E++    TC +C+      D  VG    +LPC H++H VC+D W   CR  CP+C+ +   G
Subjt:  RFKQAATPLPHSGHS---SLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTS--VLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGG

Q5XIL0 E3 ubiquitin-protein ligase RNF1679.0e-0830.38Show/hide
Query:  ITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHED
        +T +    +   + +K  E + C +CL      ++G    +LPC H +H  CVD W  + R+TCPIC+  +  G   E+
Subjt:  ITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHED

Q91XF4 E3 ubiquitin-protein ligase RNF1674.1e-0831.4Show/hide
Query:  ITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSME---GGERHEDGTNQ
        +T +    +   + +K  E + C +CL      ++G    VLPC H +H  CVD W  + R+TCPIC+  +    G E  E+ T +
Subjt:  ITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSME---GGERHEDGTNQ

Q9H6Y7 E3 ubiquitin-protein ligase RNF1675.3e-0831.65Show/hide
Query:  ITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHED
        +T +    +   + +K  + + C +CL      ++G    VLPC H +H  CVD W  + R+TCPIC+  +  G   ED
Subjt:  ITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHED

Q9M2S6 E3 ubiquitin-protein ligase SDIR12.6e-0736.49Show/hide
Query:  EKAFEDE-TCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHEDGTNQILTD
        +K  EDE TC VCL  +     G     LPCLH+FH  C+D W  + + TCP+C++    G + +D  +   +D
Subjt:  EKAFEDE-TCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHEDGTNQILTD

Arabidopsis top hitse value%identityAlignment
AT1G35630.1 Protease-associated (PA) RING/U-box zinc finger family protein1.1e-0830.61Show/hide
Query:  RFKQAATPLPHSGHS---SLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTS--VLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGG
        + +Q+   LPH G       R +     T V     E++    TC +C+      D  VG    +LPC H++H VC+D W   CR  CP+C+ +   G
Subjt:  RFKQAATPLPHSGHS---SLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTS--VLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGG

AT3G51325.1 RING/U-box superfamily protein3.0e-1446.25Show/hide
Query:  EDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRR-TCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFH
        E+E C VCL  M  +D       LPC HEFH +CVD WF   R+  CP+CR+S          T  +LTDE+++WFSSFH
Subjt:  EDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRR-TCPICRYSMEGGERHEDGTNQILTDEMVIWFSSFH

AT3G55530.1 RING/U-box superfamily protein1.9e-0836.49Show/hide
Query:  EKAFEDE-TCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHEDGTNQILTD
        +K  EDE TC VCL  +     G     LPCLH+FH  C+D W  + + TCP+C++    G + +D  +   +D
Subjt:  EKAFEDE-TCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHEDGTNQILTD

AT4G32600.1 RING/U-box superfamily protein7.6e-1039.77Show/hide
Query:  TPDDCTVVALSNPEKAF--EDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHEDGTNQ-ILT
        T +   V A ++ E+A   ED  CC+CL+   N +       LPC H FHK CVD+W  +   +CP+C+   E GE++ D T+Q ILT
Subjt:  TPDDCTVVALSNPEKAF--EDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRYSMEGGERHEDGTNQ-ILT

AT5G45290.1 RING/U-box superfamily protein1.1e-0837.5Show/hide
Query:  DCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICR
        D   + L    ++ +   C +CL      D+      LPC HEFHK CVD+W +E  R CP+CR
Subjt:  DCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCAACAAGGTGTTCTTCTTCTTGATCTACAACAACTTCATCGGCTTCCGAAGCAAGCCGAGATTCAAACAAGCAGCAACCCCGCTTCCTCATAGTGGCCATTC
GAGCCTCCGACCTATTACACCTGATGATTGTACTGTCGTAGCTCTTTCGAATCCCGAGAAGGCGTTTGAGGACGAGACATGTTGTGTGTGCTTGTCGAGTATGGGGAACA
GGGACAATGGGGTTGGCACGAGTGTTCTTCCTTGCTTGCACGAGTTTCATAAGGTATGCGTCGATCGTTGGTTCGAAGAGTGTCGGAGAACTTGTCCGATATGTCGATAT
TCGATGGAAGGAGGAGAGCGTCATGAAGATGGGACTAATCAAATACTCACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTCAACAAGGTGTTCTTCTTCTTGATCTACAACAACTTCATCGGCTTCCGAAGCAAGCCGAGATTCAAACAAGCAGCAACCCCGCTTCCTCATAGTGGCCATTC
GAGCCTCCGACCTATTACACCTGATGATTGTACTGTCGTAGCTCTTTCGAATCCCGAGAAGGCGTTTGAGGACGAGACATGTTGTGTGTGCTTGTCGAGTATGGGGAACA
GGGACAATGGGGTTGGCACGAGTGTTCTTCCTTGCTTGCACGAGTTTCATAAGGTATGCGTCGATCGTTGGTTCGAAGAGTGTCGGAGAACTTGTCCGATATGTCGATAT
TCGATGGAAGGAGGAGAGCGTCATGAAGATGGGACTAATCAAATACTCACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA
Protein sequenceShow/hide protein sequence
MVFNKVFFFLIYNNFIGFRSKPRFKQAATPLPHSGHSSLRPITPDDCTVVALSNPEKAFEDETCCVCLSSMGNRDNGVGTSVLPCLHEFHKVCVDRWFEECRRTCPICRY
SMEGGERHEDGTNQILTDEMVIWFSSFHTSGF