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Lsi07G010980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G010980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthaumatin-like protein 1
Genome locationchr07:16389180..16389771
RNA-Seq ExpressionLsi07G010980
SyntenyLsi07G010980
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028202.1 hypothetical protein SDJN02_09382 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-1366.27Show/hide
Query:  FIQLCSNLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS
        F     +LKSSTDS P+  AAG GAAT G VV Q  PLPE+SW+AD+AIG STR HP    FLLFVLIFGSS FFS+ NLFSS
Subjt:  FIQLCSNLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS

XP_008448548.1 PREDICTED: thaumatin-like protein 1 [Cucumis melo]2.8e-1777.92Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSL-FFSFLNLFSS
        +LKSSTDSSPRT    TG  TAGVVAQ TPLP+SSWMAD+AIGGSTR +  DL FLLFVLIFGSSL FFS LNLFSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSL-FFSFLNLFSS

XP_022949172.1 thaumatin-like protein 1 [Cucurbita moschata]3.2e-1368.83Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS
        +LKSSTDS P+  AAG GAAT G VV Q  PLPE+SW+AD+AIG STR HP    FL+FVLIFGSS FFS+ NLFSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS

XP_023539979.1 thaumatin-like protein 1 [Cucurbita pepo subsp. pepo]1.4e-1370.13Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS
        +LKSSTDS P+T  AG GAAT G VV Q  PLPE+SW+AD+AIG STR HP    FLLFVLIFGSS FFS+ NLFSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS

XP_038876615.1 thaumatin-like protein 1 isoform X1 [Benincasa hispida]1.1e-1877.63Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS
        +LKSSTDSSPRT A GTG  TAG V QTT LPE+SW+ADLAIG STR HP DL FLLFVLIFGSS FFSFL+ FSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS

TrEMBL top hitse value%identityAlignment
A0A0A0L119 Uncharacterized protein1.5e-1166.67Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAGVVAQTT-PLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFF
        +LKSSTDS P+T        T GVVAQTT PLPESSW+ D+A+GGSTR H  D+ FLLFVLIFGSSL F
Subjt:  NLKSSTDSSPRTAAAGTGAATAGVVAQTT-PLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFF

A0A1S3BJX4 thaumatin-like protein 11.4e-1777.92Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSL-FFSFLNLFSS
        +LKSSTDSSPRT    TG  TAGVVAQ TPLP+SSWMAD+AIGGSTR +  DL FLLFVLIFGSSL FFS LNLFSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSL-FFSFLNLFSS

A0A6J1GBA8 thaumatin-like protein 11.6e-1368.83Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS
        +LKSSTDS P+  AAG GAAT G VV Q  PLPE+SW+AD+AIG STR HP    FL+FVLIFGSS FFS+ NLFSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS

A0A6J1KWD3 thaumatin-like protein 12.7e-1368.83Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS
        +LKSSTDS P+  AAG GAA+ G VV Q  PLPE+SW+AD+AIG STR HP    FLLFVLIFGSS FFS+ NLFSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAG-VVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS

E5RDD8 Zeamatin1.4e-1777.92Show/hide
Query:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSL-FFSFLNLFSS
        +LKSSTDSSPRT    TG  TAGVVAQ TPLP+SSWMAD+AIGGSTR +  DL FLLFVLIFGSSL FFS LNLFSS
Subjt:  NLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSL-FFSFLNLFSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATTAATATCTTTATTCAGCTATGTTCAAACTTAAAATCATCAACAGATTCATCGCCAAGGACGGCGGCAGCTGGAACAGGGGCGGCAACCGCCGGGGTGGTGGC
ACAGACGACACCGCTGCCCGAAAGTTCATGGATGGCAGATTTGGCCATTGGAGGCTCAACCAGAATTCACCCAGCTGATTTGTTTTTTCTCCTGTTTGTGTTAATTTTTG
GAAGCTCTTTATTCTTCTCATTTCTAAATTTATTTTCATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAATTAATATCTTTATTCAGCTATGTTCAAACTTAAAATCATCAACAGATTCATCGCCAAGGACGGCGGCAGCTGGAACAGGGGCGGCAACCGCCGGGGTGGTGGC
ACAGACGACACCGCTGCCCGAAAGTTCATGGATGGCAGATTTGGCCATTGGAGGCTCAACCAGAATTCACCCAGCTGATTTGTTTTTTCTCCTGTTTGTGTTAATTTTTG
GAAGCTCTTTATTCTTCTCATTTCTAAATTTATTTTCATCTTAGCATTAAAATTTTAAAGTCCCATAATGAAGAGATTGATGATTTGGAGAAACAAATGGATTCAAATTT
CATATCACCAAAAGAAAGAAAAAAAGTTCCATTTTTCTACCATTTTCAAGAAGTAAATTTGTGTATATAAAAATATTGTAAGCATTATTTTTTTGCAAAAAGAAAGCCTT
TCTAGTT
Protein sequenceShow/hide protein sequence
MVINIFIQLCSNLKSSTDSSPRTAAAGTGAATAGVVAQTTPLPESSWMADLAIGGSTRIHPADLFFLLFVLIFGSSLFFSFLNLFSS