; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G011260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G011260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionELL-associated factor 1-like
Genome locationchr07:16723090..16723623
RNA-Seq ExpressionLsi07G011260
SyntenyLsi07G011260
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052985.1 hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa]6.2e-3269.92Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQ
        +KKSPMA  LK+ L KLTA V  CLV RRRSQRL SF SDDRKV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLERQ
Subjt:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQ

Query:  TSLQLRYYRVNSSETEYVERSPP
         SLQLRYYRVNS ETEY + SPP
Subjt:  TSLQLRYYRVNSSETEYVERSPP

KAG6596691.1 hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2761.29Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQR----RIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQT
        QKKSP+ F LK++  KLTAF+  C+ RR+ S+RLRSF SDDR   +R  L+D+R    R V KLERA+++SY   E DVDKR++IFID   RQLRLERQ 
Subjt:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQR----RIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQT

Query:  SLQLRYYRVNSSETEYVERSPPKP
        SLQLRY RVNSSETE  E+SPP P
Subjt:  SLQLRYYRVNSSETEYVERSPPKP

KAG7015798.1 hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2152.46Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRI----VEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQT
        +  +P+   +K+ LTKLTAFV  C V R  S+R+RSF SD R   +R +L D+  +    V KLER  +S  G CE DVD+RA+IFID   RQL LERQ 
Subjt:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRI----VEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQT

Query:  SLQLRYYRVNSSETEYVERSPP
        SL+LRYY +NSSE +Y  RSPP
Subjt:  SLQLRYYRVNSSETEYVERSPP

XP_011652707.1 uncharacterized protein LOC105435054 [Cucumis sativus]7.3e-2563.56Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQ
        MA  L++ L KL A +  CL+ R+RS+RL SF S DD+KV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLERQ SLQ
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQ

Query:  LRYYRVNSSETEYVERSP
        LRYYRVNS ETEY +RSP
Subjt:  LRYYRVNSSETEYVERSP

XP_022145292.1 uncharacterized protein LOC111014780 [Momordica charantia]7.6e-2253.49Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVH----RCLVRRRRSQRLRSFVSDDRKVEIRIVLDD----QRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRL
        +KKSP+   LK+ + K+TA +      CL RRR S RLRSF   DR V +R  L+D    +   + +LERA++  YG  E DVDKR++IFID   R+LRL
Subjt:  QKKSPMAFCLKRTLTKLTAFVH----RCLVRRRRSQRLRSFVSDDRKVEIRIVLDD----QRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRL

Query:  ERQTSLQLRYYRVNSSETEYVERSPPKPP
        ERQ SLQLRYYR+NSS TE  ERSPP PP
Subjt:  ERQTSLQLRYYRVNSSETEYVERSPPKPP

TrEMBL top hitse value%identityAlignment
A0A0A0L4Z8 Uncharacterized protein7.7e-2864.23Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLER
        +KKSPMA  L++ L KL A +  CL+ R+RS+RL SF S DD+KV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLER
Subjt:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVS-DDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLER

Query:  QTSLQLRYYRVNSSETEYVERSP
        Q SLQLRYYRVNS ETEY +RSP
Subjt:  QTSLQLRYYRVNSSETEYVERSP

A0A0A0L6A3 Uncharacterized protein1.3e-1450.39Show/hide
Query:  MAFCLKRTLTKLTAFVHRCLVRRRRS-QRLRSFVSDDRKVEIRIVLDDQRRIVEKLERAANSSYGRCEQ---DVDKRAEIFIDTVHRQLRLERQTSLQLR
        MA  L+ TL KL AF+  CL+ RRRS  R R+ + DD             +    LER ++S Y  CE+   DVD RAEIFI+   RQLRLERQ SLQLR
Subjt:  MAFCLKRTLTKLTAFVHRCLVRRRRS-QRLRSFVSDDRKVEIRIVLDDQRRIVEKLERAANSSYGRCEQ---DVDKRAEIFIDTVHRQLRLERQTSLQLR

Query:  YYRV--NSSETEYVERSPPKPPPLPPI
         Y V  NS ET+Y E  PP PPP PPI
Subjt:  YYRV--NSSETEYVERSPPKPPPLPPI

A0A5D3CHZ5 Uncharacterized protein3.0e-3269.92Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQ
        +KKSPMA  LK+ L KLTA V  CLV RRRSQRL SF SDDRKV IRIVL+DQ RI E     KLERA++S YG  E+DVD+RAEIFI+   RQLRLERQ
Subjt:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVE-----KLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQ

Query:  TSLQLRYYRVNSSETEYVERSPP
         SLQLRYYRVNS ETEY + SPP
Subjt:  TSLQLRYYRVNSSETEYVERSPP

A0A6J1CVX6 ELL-associated factor 1-like6.7e-0840.29Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQ------------------RRIVEKLERAANSSYGRCEQDVDKRAEIF
        +KK    F LK+ L K T  +   L RR  S RLRS    DR V  R V   Q                     V+        SY   E DVD+RA+ F
Subjt:  QKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQ------------------RRIVEKLERAANSSYGRCEQDVDKRAEIF

Query:  IDTVHRQLRLERQTSLQLR-YYRVNSSETEYVERSPPKP
        ID    +L LERQ S QLR YYR +SSETEY + SPP P
Subjt:  IDTVHRQLRLERQTSLQLR-YYRVNSSETEYVERSPPKP

A0A6J1CW64 uncharacterized protein LOC1110147803.7e-2253.49Show/hide
Query:  QKKSPMAFCLKRTLTKLTAFVH----RCLVRRRRSQRLRSFVSDDRKVEIRIVLDD----QRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRL
        +KKSP+   LK+ + K+TA +      CL RRR S RLRSF   DR V +R  L+D    +   + +LERA++  YG  E DVDKR++IFID   R+LRL
Subjt:  QKKSPMAFCLKRTLTKLTAFVH----RCLVRRRRSQRLRSFVSDDRKVEIRIVLDD----QRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRL

Query:  ERQTSLQLRYYRVNSSETEYVERSPPKPP
        ERQ SLQLRYYR+NSS TE  ERSPP PP
Subjt:  ERQTSLQLRYYRVNSSETEYVERSPPKPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G57510.1 unknown protein1.2e-0445.65Show/hide
Query:  EQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRVNSSETEYVERSP
        ++D+D +AE+FI   +RQL++ERQ SL+L+Y + N+    Y  RSP
Subjt:  EQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRVNSSETEYVERSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGAAATCGCCAATGGCGTTCTGTTTGAAGAGGACGCTGACGAAACTCACTGCATTTGTCCACCGCTGCCTCGTTCGCCGGCGACGTTCTCAACGGTTGAGATC
ATTCGTTTCTGACGATCGGAAGGTAGAGATACGGATTGTCTTGGACGATCAGAGGAGAATCGTTGAGAAGCTTGAACGTGCTGCGAATTCAAGCTACGGAAGGTGTGAAC
AGGATGTAGACAAGCGAGCGGAGATTTTCATCGATACTGTCCACCGTCAATTGAGGTTAGAGAGACAAACTTCTTTGCAATTGAGGTACTATAGAGTTAATAGCTCTGAA
ACAGAGTATGTAGAGAGATCGCCACCGAAGCCGCCGCCGCTGCCGCCGATTTTCCGTCGATTTAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGAAATCGCCAATGGCGTTCTGTTTGAAGAGGACGCTGACGAAACTCACTGCATTTGTCCACCGCTGCCTCGTTCGCCGGCGACGTTCTCAACGGTTGAGATC
ATTCGTTTCTGACGATCGGAAGGTAGAGATACGGATTGTCTTGGACGATCAGAGGAGAATCGTTGAGAAGCTTGAACGTGCTGCGAATTCAAGCTACGGAAGGTGTGAAC
AGGATGTAGACAAGCGAGCGGAGATTTTCATCGATACTGTCCACCGTCAATTGAGGTTAGAGAGACAAACTTCTTTGCAATTGAGGTACTATAGAGTTAATAGCTCTGAA
ACAGAGTATGTAGAGAGATCGCCACCGAAGCCGCCGCCGCTGCCGCCGATTTTCCGTCGATTTAATGAATGA
Protein sequenceShow/hide protein sequence
MQKKSPMAFCLKRTLTKLTAFVHRCLVRRRRSQRLRSFVSDDRKVEIRIVLDDQRRIVEKLERAANSSYGRCEQDVDKRAEIFIDTVHRQLRLERQTSLQLRYYRVNSSE
TEYVERSPPKPPPLPPIFRRFNE