; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G011620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G011620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSurvival motor neuron
Genome locationchr07:17090877..17096194
RNA-Seq ExpressionLsi07G011620
SyntenyLsi07G011620
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR040424 - Survival motor neuron-like protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577733.1 hypothetical protein SDJN03_25307, partial [Cucurbita argyrosperma subsp. sororia]2.7e-9783.55Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNETT TSEAKENISVEPCPISCTDFS AL+VKET+QE +EDSNLNLK E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSAS PS  Q I SY PS YP+ +GPQSSS ADGDIIKTAMDSAARAISS+KTVNK   EKESE HDGIMPQ GAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK
        SETDL TVLNAWYSAGFYTGKYLVEQS AKK
Subjt:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK

XP_022923599.1 uncharacterized protein LOC111431235 [Cucurbita moschata]6.5e-9984.42Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNETT TSEAKENISVEPCPISCTDFS AL+VKET+QE +EDSNLNLK E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSASQPS  Q IPSY PS YP+ +GPQSSS ADGDIIKTAMDSAARAISS+KTVNK   EKESE HDGIMPQ GAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK
        SETDL TVLNAWYSAGFYTGKYLVEQS AKK
Subjt:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK

XP_022965361.1 uncharacterized protein LOC111465241 isoform X1 [Cucurbita maxima]7.5e-9583.56Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNET  TSEAKENISVEPCPISCTDFS AL+VKET+QE IEDSNLNL+ E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSASQPS  QAIPSY PS YP+ +GPQSSSLADGDIIKTAMDSAARAISSMKTVNK   EKESE HDGIMPQ GAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVE
        SETDL TVLNAWYSAGFYTGK +++
Subjt:  SETDLATVLNAWYSAGFYTGKYLVE

XP_022965362.1 uncharacterized protein LOC111465241 isoform X2 [Cucurbita maxima]1.3e-9985.28Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNET  TSEAKENISVEPCPISCTDFS AL+VKET+QE IEDSNLNL+ E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSASQPS  QAIPSY PS YP+ +GPQSSSLADGDIIKTAMDSAARAISSMKTVNK   EKESE HDGIMPQ GAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK
        SETDL TVLNAWYSAGFYTGKYLVEQS AKK
Subjt:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK

XP_023551935.1 uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo]5.5e-9884.42Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNE T TSEAKENISVEPCPISCTDFS AL+VKET+QE ++DSNLNLK E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSASQPS  QAIPSY PS YPV +GPQSSS ADGDIIKTAMDSAARAISS+KTVNK   EKESE H GIMPQSGAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK
        SETDL TVLNAWYSAGFYTGKYLVEQS AKK
Subjt:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK

TrEMBL top hitse value%identityAlignment
A0A1S3BL18 uncharacterized protein LOC103490751 isoform X34.0e-9481.82Show/hide
Query:  LNRSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGS
        L RSVDEESY GEN+VEFEV ETT+T EAKENI VE   I+CTDFSDALHV+ETQ+EP+EDS+L     E+YN LLKQYYELEEKRQKVLEQLYQCGAG 
Subjt:  LNRSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGS

Query:  WNYQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAI-SSMKTVNKEKESERHDGIMPQSGAS
        WNYQDVNAGSDVGTQWG SAA QE+PVSASQPSHY  IPSYLP+ YP+L+GPQSSSL D DIIKTAMDSA RAI SS+KTVNK KES+RHD IMPQSG S
Subjt:  WNYQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAI-SSMKTVNKEKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK
        SETDLATVLNAWYSAGFYTGKYL+EQSHAKK
Subjt:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK

A0A5A7UCV0 Uncharacterized protein2.6e-9380.69Show/hide
Query:  HLLNRSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGA
        +L + SVDEESY GEN+VEFEV ETT+T EAKENI VE   I+CTDFSDALHV+ETQ+EP+EDS+L     E+YN LLKQYYELEEKRQKVLEQLYQCGA
Subjt:  HLLNRSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGA

Query:  GSWNYQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAI-SSMKTVNKEKESERHDGIMPQSG
        G WNYQDVNAGSDVGTQWG SAA QE+PVSASQPSHY  IPSYLP+ YP+L+GPQSSSL D DIIKTAMDSA RAI SS+KTVNK KES+RHD IMPQSG
Subjt:  GSWNYQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAI-SSMKTVNKEKESERHDGIMPQSG

Query:  ASSETDLATVLNAWYSAGFYTGKYLVEQSHAKK
         SSETDLATVLNAWYSAGFYTGKYL+EQSHAKK
Subjt:  ASSETDLATVLNAWYSAGFYTGKYLVEQSHAKK

A0A6J1E6W0 uncharacterized protein LOC1114312353.2e-9984.42Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNETT TSEAKENISVEPCPISCTDFS AL+VKET+QE +EDSNLNLK E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSASQPS  Q IPSY PS YP+ +GPQSSS ADGDIIKTAMDSAARAISS+KTVNK   EKESE HDGIMPQ GAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK
        SETDL TVLNAWYSAGFYTGKYLVEQS AKK
Subjt:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK

A0A6J1HK48 uncharacterized protein LOC111465241 isoform X26.4e-10085.28Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNET  TSEAKENISVEPCPISCTDFS AL+VKET+QE IEDSNLNL+ E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSASQPS  QAIPSY PS YP+ +GPQSSSLADGDIIKTAMDSAARAISSMKTVNK   EKESE HDGIMPQ GAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK
        SETDL TVLNAWYSAGFYTGKYLVEQS AKK
Subjt:  SETDLATVLNAWYSAGFYTGKYLVEQSHAKK

A0A6J1HLH3 uncharacterized protein LOC111465241 isoform X13.6e-9583.56Show/hide
Query:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN
        RSVDEESYIG N V FEVNET  TSEAKENISVEPCPISCTDFS AL+VKET+QE IEDSNLNL+ E+ YN+LLKQYYELEEKRQKVLEQLYQCGAG WN
Subjt:  RSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQKVLEQLYQCGAGSWN

Query:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS
        YQDV AGSD+G QWG SAAYQE+PVSASQPS  QAIPSY PS YP+ +GPQSSSLADGDIIKTAMDSAARAISSMKTVNK   EKESE HDGIMPQ GAS
Subjt:  YQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNK---EKESERHDGIMPQSGAS

Query:  SETDLATVLNAWYSAGFYTGKYLVE
        SETDL TVLNAWYSAGFYTGK +++
Subjt:  SETDLATVLNAWYSAGFYTGKYLVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGTTGTATCTCCTTCTCATCAAAGAAGAGAAGGGGGAGATAGATTGGAAGAAAAGCACCTCTTGAACAGGAGTGTAGATGAAGAGAGCTATATTGGAGAAAATAG
TGTTGAGTTTGAAGTCAATGAGACAACAACTACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGATGCTCTACATGTGA
AAGAGACGCAACAGGAGCCCATCGAGGATTCCAATTTAAATCTAAAATGTGAAGAGGACTATAACCAGCTACTCAAGCAGTATTATGAGCTTGAGGAGAAGAGACAGAAG
GTTCTAGAACAGCTTTATCAATGTGGTGCTGGTAGTTGGAACTACCAGGATGTCAATGCAGGTTCTGACGTTGGAACTCAATGGGGAGCATCTGCTGCTTATCAAGAATA
CCCAGTCTCTGCAAGCCAACCTTCTCATTACCAAGCAATACCCTCCTATTTGCCCTCCATTTATCCAGTTTTATCTGGTCCTCAAAGTTCGTCCCTTGCTGATGGTGACA
TTATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCTTCCATGAAGACTGTAAATAAAGAGAAGGAGAGCGAGAGGCATGATGGGATAATGCCTCAAAGTGGTGCT
AGCTCTGAAACAGACCTTGCTACTGTTTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCATGCCAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGTTGTATCTCCTTCTCATCAAAGAAGAGAAGGGGGAGATAGATTGGAAGAAAAGCACCTCTTGAACAGGAGTGTAGATGAAGAGAGCTATATTGGAGAAAATAG
TGTTGAGTTTGAAGTCAATGAGACAACAACTACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGATGCTCTACATGTGA
AAGAGACGCAACAGGAGCCCATCGAGGATTCCAATTTAAATCTAAAATGTGAAGAGGACTATAACCAGCTACTCAAGCAGTATTATGAGCTTGAGGAGAAGAGACAGAAG
GTTCTAGAACAGCTTTATCAATGTGGTGCTGGTAGTTGGAACTACCAGGATGTCAATGCAGGTTCTGACGTTGGAACTCAATGGGGAGCATCTGCTGCTTATCAAGAATA
CCCAGTCTCTGCAAGCCAACCTTCTCATTACCAAGCAATACCCTCCTATTTGCCCTCCATTTATCCAGTTTTATCTGGTCCTCAAAGTTCGTCCCTTGCTGATGGTGACA
TTATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCTTCCATGAAGACTGTAAATAAAGAGAAGGAGAGCGAGAGGCATGATGGGATAATGCCTCAAAGTGGTGCT
AGCTCTGAAACAGACCTTGCTACTGTTTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCATGCCAAGAAATAATGAAAACCAAG
CTTCCCCATGGCTGCCTAGCTCATGTTACCAATTTTGCCCACTTTTCACATCCATGCCATATGTGTGCTATGCTACAACTCTATTAATCTTTACACTGAACTTTGCTTGT
ACAGAGGAAAGCCAACTTTGATCTAAATGACTCTGAATTTTGCACTATTTTTATATCCACTCTATTTTGTAACATATCTATCATTCATCTCATACTAAATGTCACCAACC
CATAATAGACGTACACTTATCAAATATACTACCAAGG
Protein sequenceShow/hide protein sequence
MPVVSPSHQRREGGDRLEEKHLLNRSVDEESYIGENSVEFEVNETTTTSEAKENISVEPCPISCTDFSDALHVKETQQEPIEDSNLNLKCEEDYNQLLKQYYELEEKRQK
VLEQLYQCGAGSWNYQDVNAGSDVGTQWGASAAYQEYPVSASQPSHYQAIPSYLPSIYPVLSGPQSSSLADGDIIKTAMDSAARAISSMKTVNKEKESERHDGIMPQSGA
SSETDLATVLNAWYSAGFYTGKYLVEQSHAKK