CuGenDBv2

Gene ID	Lsi07G011650
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr07:17106420..17106928
RNA-Seq Expression	Lsi07G011650
Synteny	Lsi07G011650
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004150665.1 uncharacterized protein LOC101203762 isoform X2 [Cucumis sativus]

2.1e-18

86.21

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGVVNGCGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

XP_008448638.1 PREDICTED: uncharacterized protein LOC103490751 isoform X3 [Cucumis melo]

1.9e-19

87.93

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVN CGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

XP_016900686.1 PREDICTED: uncharacterized protein LOC103490751 isoform X1 [Cucumis melo]

1.9e-19

87.93

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVN CGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

XP_016900687.1 PREDICTED: uncharacterized protein LOC103490751 isoform X2 [Cucumis melo]

1.9e-19

87.93

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVN CGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

XP_031739471.1 uncharacterized protein LOC101203762 isoform X1 [Cucumis sativus]

2.1e-18

86.21

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGVVNGCGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D7 Uncharacterized protein

1.0e-18

86.21

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGVVNGCGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

A0A1S3BL18 uncharacterized protein LOC103490751 isoform X3

9.2e-20

87.93

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVN CGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

A0A1S4DXH8 uncharacterized protein LOC103490751 isoform X1

9.2e-20

87.93

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVN CGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

A0A1S4DXI5 uncharacterized protein LOC103490751 isoform X2

9.2e-20

87.93

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVN CGKS+  E KRSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

A0A6J1HK48 uncharacterized protein LOC111465241 isoform X2

1.8e-15

77.59

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Query:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV
        M LDRMYWDDSMIVKAMDEAMLKYK MHG+++  VSAEGGGV NGCGKS+  E +RSV
Subjt:  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAAATATCCGGGCGCGGGTCGCGCACGTCCCGACCCGAAACCGTTCATCGCTTTGCCACCTACAGTTCAGTATAGTCAGAGTTCAATCGAGAATATGGGGCTAGACAG
AATGTATTGGGATGATTCCATGATTGTCAAAGCCATGGATGAAGCTATGTTGAAGTATAAGATAATGCATGGACATGAAGTCCCCTGTGTTTCAGCCGAGGGAGGAGGAG
TTGTAAATGGTTGCGGTAAGAGTGAAGAGAAAGAGACGAAAAGGTCCGTAGCTTCCTGGCCATAG

mRNA sequence

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Protein sequence

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MKYPGAGRARPDPKPFIALPPTVQYSQSSIENMGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNGCGKSEEKETKRSVASWP

Lsi07G011650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome