CuGenDBv2

Gene ID	Lsi07G011690
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	SANT domain-containing protein
Genome location	chr07:17162472..17162922
RNA-Seq Expression	Lsi07G011690
Synteny	Lsi07G011690
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0010158 - abaxial cell fate specification (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0053021.1 putative transcription factor KAN2 isoform X1 [Cucumis melo var. makuwa]

5.2e-35

91.11

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  GQDHHRSHKDFHALWSNSSR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

XP_004150668.1 probable transcription factor KAN2 isoform X1 [Cucumis sativus]

2.2e-33

88.76

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSS
        MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  G+DHHRSHKD HALWSNSS
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSS

XP_008465592.1 PREDICTED: probable transcription factor KAN2 isoform X1 [Cucumis melo]

4.9e-33

85.42

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Query:  MYRTVKTTDRAAAAASS------GNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASS      GNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  GQDHHRSHKDFHALWSNSSR
Subjt:  MYRTVKTTDRAAAAASS------GNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

XP_008465593.1 PREDICTED: probable transcription factor KAN2 isoform X2 [Cucumis melo]

5.2e-35

91.11

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  GQDHHRSHKDFHALWSNSSR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

XP_011650330.1 probable transcription factor KAN2 isoform X2 [Cucumis sativus]

5.8e-34

88.89

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  G+DHHRSHKD HALWSNSSR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L171 SANT domain-containing protein

2.8e-34

88.89

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  G+DHHRSHKD HALWSNSSR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

A0A1S3CP52 probable transcription factor KAN2 isoform X1

2.4e-33

85.42

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Query:  MYRTVKTTDRAAAAASS------GNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASS      GNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  GQDHHRSHKDFHALWSNSSR
Subjt:  MYRTVKTTDRAAAAASS------GNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

A0A1S3CP78 probable transcription factor KAN2 isoform X2

2.5e-35

91.11

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  GQDHHRSHKDFHALWSNSSR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

A0A5A7UHK5 Putative transcription factor KAN2 isoform X1

2.5e-35

91.11

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGD TNED TYENEKSSRMRLDAP GDP+THG FRQTV+  GQDHHRSHKDFHALWSNSSR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHG-FRQTVIGGGQDHHRSHKDFHALWSNSSR

A0A6J1CVG7 probable transcription factor KAN2 isoform X2

2.2e-31

81.44

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGD-------PMTHGFRQTVIGGGQD-HHRSHKDFHALWSNSSR
        MYRTVKTTDRAAAAASSGNS DVYDQNGSSGD TNED+TYENEKSSRMRLDAPT D          HGFRQ V+GGGQD HHRSH+DFHALWSNSSR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGD-------PMTHGFRQTVIGGGQD-HHRSHKDFHALWSNSSR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32240.1 Homeodomain-like superfamily protein

5.1e-04

59.57

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Query:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSR
        MYRTVKTTD+  AAASSG S DVY +NGSSGD  ++D  ++  + SR
Subjt:  MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSR

Sequences

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CDS sequence

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ATGTATAGAACTGTAAAGACTACTGACAGAGCTGCTGCTGCAGCTTCTTCTGGGAATTCAGATGATGTTTACGATCAAAATGGGTCATCTGGAGATGCAACAAATGAAGA
TATAACATACGAAAACGAGAAGTCGTCCAGAATGAGACTCGATGCTCCGACGGGTGATCCGATGACCCATGGATTTCGACAAACGGTCATTGGAGGAGGTCAAGATCATC
ATCGTTCTCATAAGGATTTTCATGCCTTGTGGAGTAATTCTTCGAGGTAA

mRNA sequence

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TTTGCAGATGTATAGAACTGTAAAGACTACTGACAGAGCTGCTGCTGCAGCTTCTTCTGGGAATTCAGATGATGTTTACGATCAAAATGGGTCATCTGGAGATGCAACAA
ATGAAGATATAACATACGAAAACGAGAAGTCGTCCAGAATGAGACTCGATGCTCCGACGGGTGATCCGATGACCCATGGATTTCGACAAACGGTCATTGGAGGAGGTCAA
GATCATCATCGTTCTCATAAGGATTTTCATGCCTTGTGGAGTAATTCTTCGAGGTAAAACACTAAATCTCTTTCTCGTGAAATTATTTGATATCGTTAGATATAAGAGAG
AA

Protein sequence

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MYRTVKTTDRAAAAASSGNSDDVYDQNGSSGDATNEDITYENEKSSRMRLDAPTGDPMTHGFRQTVIGGGQDHHRSHKDFHALWSNSSR

Lsi07G011690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome