; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G011750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G011750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationchr07:17263369..17270547
RNA-Seq ExpressionLsi07G011750
SyntenyLsi07G011750
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577725.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]9.1e-20476.09Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        MS+KTVKVSNVSLGASERD+KEFFSFSGDI Y+EMQSESERSQIAYVTFKDTQGAETA+LLSGATIVDLSVNIT CPDY LPPEATAPPPAPGT APG A
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESA++KAEDVVS MLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEK+SAGT L+ +KVREVDQKFQVSEKTKSAFAVAEEKVSNAG+A
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQESIWCSKHWHRCQSLSIRRK
        IM NRYV SGTSWV D FNKVAKAAGEVGQKTKEK+ VSEE+QKKKT  +   +HL ESPKAA+  P EPQQRPKPEPAQ                    
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQESIWCSKHWHRCQSLSIRRK

Query:  KINGHNDSPTSIGDFSEQSELQREGQESSRERKMVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKLPKIRQFLHRRTRAVFDVALKVHLNIQQRDLEV
                                                   AYFLGLKRTYRLALKLQRRIVSPK PKIRQFLHRRTR VFDVALKVHLNIQQRDLEV
Subjt:  KINGHNDSPTSIGDFSEQSELQREGQESSRERKMVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKLPKIRQFLHRRTRAVFDVALKVHLNIQQRDLEV

Query:  GRNLGNWILRLLDRYKPSAQIRKQDGGSMTNATKQISSSSL-KIPEGSRILKKPNSSRQLFTSSTNIWPKQFPTISMMMKSPKPATSMIQHRHFGILTPA
        GRNLGNWILRLLDRYKPSAQIRKQDGGS+ NATKQISSSS+ K PE S++LKKP SSRQLFTSSTN+WPKQFPTISM MK   PAT+MIQHRHFG LTP 
Subjt:  GRNLGNWILRLLDRYKPSAQIRKQDGGSMTNATKQISSSSL-KIPEGSRILKKPNSSRQLFTSSTNIWPKQFPTISMMMKSPKPATSMIQHRHFGILTPA

Query:  ASGPIY-VRGWHSGVIREDIRQWMLQN
        A  P Y  RGWH GVIREDI+QWMLQN
Subjt:  ASGPIY-VRGWHSGVIREDIRQWMLQN

XP_008448657.1 PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo]3.3e-13796.79Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+EEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

XP_008448658.1 PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]9.6e-13796.43Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+EEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

XP_038906357.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]9.3e-14098.93Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT L+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV DAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

XP_038906358.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]2.7e-13998.57Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGT L+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV DAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

TrEMBL top hitse value%identityAlignment
A0A0A0L545 RRM domain-containing protein3.0e-13695.71Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        MSIKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVAT DKKIGFTEKISAGTSL+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV D FN+VAKAAGEVGQKTKEKVVV+EEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

A0A1S3BK74 binding partner of ACD11 1 isoform X24.7e-13796.43Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+EEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

A0A1S3BK81 binding partner of ACD11 1 isoform X11.6e-13796.79Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+EEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

A0A5A7UH68 Binding partner of ACD11 1 isoform X24.7e-13796.43Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        M IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSE+ERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTK PGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEKISAGTSL+SDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IMKNRYVMSGTSWV D FNKVAKAAGEVGQKTKEKVVV+EEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

A0A6J1CV14 binding partner of ACD11 1-like isoform X12.1e-12992.86Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA
        MSIKTVKVSNVSLGAS+RD+KEFFSFSGDIEYLEMQSESERSQ AYVTFKD QGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT APGAA
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVAT DKKIGFTEKISAGT L+SDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ
        IM NR+VMSGTSWV DAFNKVAKAAGEVGQKTKEK V SEEEQKKKTVEDFA+VHLSESPKAA+APP EPQQRPKPEPAQ
Subjt:  IMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQ

SwissProt top hitse value%identityAlignment
Q9LFD5 Binding partner of ACD11 14.7e-7058.33Show/hide
Query:  IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AE
        +++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + AE
Subjt:  IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK
        MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.2e-9668.88Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP-PPAPGTKAPGA
        M++ TVKVSNVSLGA++RD+KEFFSFSGDI YLE QSE+ER+++AYVTFKD QGAETAVLLSGATIVD SV +++ PDY+L PEA A   P    K+P A
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP-PPAPGTKAPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS
         +S  RKAEDVVS MLAKGFILGKDA+  AK+ DEKHQL+STASAKVA+ DKKIGFT+KI+ GT ++ +KVREVDQK+QVSEKTKSA A AE+ VSNAGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS

Query:  AIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPE---EPQQRPKPEPAQES
        AIMKNRYV++G +WVT AFNKVAKAA EVGQK KEKV ++EEE K+K V++FA+VHLSESPKAAS+  E   E +    PE  ++S
Subjt:  AIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPE---EPQQRPKPEPAQES

AT5G16840.1 binding partner of acd11 13.4e-7158.33Show/hide
Query:  IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AE
        +++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + AE
Subjt:  IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK
        MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK

AT5G16840.2 binding partner of acd11 11.8e-7258.33Show/hide
Query:  IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AE
        +++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + AE
Subjt:  IKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK
        MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK

AT5G16840.3 binding partner of acd11 18.9e-7258.27Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-
        M++++VKV N+S GA+E DIKEFFSFSG++E +++QS +E S  AYVTFK+TQGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + 
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGA-

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++K++AGTSL+++K++ VDQ FQV+E+TKS +A AE+ VS+AGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS

Query:  AIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK
        A+MKNRYV++G SW   AFN+VA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  AIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVSEEEQ----KKKTVEDFAKVHLSESPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.8e-8863.64Show/hide
Query:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP----PPAPGTKA
        MS+ TVKVSNVSL A+ERD+KEFFSFSGDI YLE QSE++ S++AYVTFKD QGAETAVLL+G+TIVD SV +T+ PDY+LPP+A A       +  + +
Subjt:  MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP----PPAPGTKA

Query:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVS
        P   + S FRKAEDVVSGM++KGF+LGKDA+  AK+ DEKHQL+STASA+V + DK+IGFTEKI+ GT+++S+KV+EVDQKFQV+EKTKSA A AE+ VS
Subjt:  PGAAE-SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVS

Query:  NAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVS--EEEQKKKTVEDFAKVHLSESPKAASAPPEE---PQQRPKP
        NAGSAIMKNRYV++G +WVT AFN+V+KAA EVGQK KEKV ++  EEE+KKK V++ A VHL+ESPKA     ++   P+ + +P
Subjt:  NAGSAIMKNRYVMSGTSWVTDAFNKVAKAAGEVGQKTKEKVVVS--EEEQKKKTVEDFAKVHLSESPKAASAPPEE---PQQRPKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTAAGACTGTCAAAGTCAGCAATGTCTCCCTGGGAGCGTCTGAACGAGATATCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGAATATCTTGAAATGCAGAG
TGAAAGTGAGCGGTCTCAAATTGCTTATGTAACCTTTAAGGACACGCAAGGAGCAGAGACTGCCGTTCTTTTGTCCGGAGCAACTATAGTGGATCTTTCTGTCAACATCA
CTCTGTGTCCTGATTATGAGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAAAGCACCTGGTGCTGCTGAATCTGCCTTTCGGAAAGCAGAGGATGTG
GTTAGTGGCATGCTAGCCAAGGGCTTTATCTTGGGTAAAGATGCACTCAACTCGGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACGGCTTCAGCTAAAGTTGC
TACATTGGATAAAAAAATTGGATTCACTGAGAAAATTAGTGCTGGTACATCGTTGATGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCGGAGAAGACTA
AATCAGCATTTGCAGTTGCGGAAGAAAAAGTTAGCAATGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTACTGATGCTTTCAATAAG
GTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCGGAAGAAGAACAGAAAAAGAAGACGGTTGAAGATTTTGCTAAGGTTCATCTTTC
AGAATCCCCAAAAGCAGCATCAGCGCCCCCTGAGGAGCCTCAACAACGTCCCAAGCCCGAACCAGCTCAAGAGAGTATATGGTGCTCTAAGCATTGGCATCGGTGTCAGT
CTCTCTCTATAAGAAGAAAAAAAATCAACGGCCACAATGATTCTCCTACATCCATCGGTGATTTTAGCGAACAGAGCGAATTGCAGAGAGAAGGACAAGAAAGTTCTAGA
GAGAGAAAAATGGTGCTATGGGAAATCACTCTAGGAACCGCCTATTTCTTGGGGCTCAAGCGAACTTATCGCCTCGCCCTCAAGCTTCAACGTCGCATCGTTAGCCCAAA
GCTTCCCAAGATCCGTCAGTTTCTTCATCGACGTACCCGTGCTGTATTTGATGTAGCATTAAAGGTTCACTTGAACATACAGCAGAGAGACCTAGAAGTTGGTCGGAATC
TTGGTAACTGGATTCTACGATTGCTCGACAGATATAAACCATCAGCTCAAATTCGTAAACAGGACGGTGGATCGATGACGAATGCAACAAAACAGATTTCCAGCTCCTCC
TTGAAAATTCCAGAGGGCTCCCGGATCCTGAAGAAGCCAAACTCTTCCAGACAACTATTTACCTCATCAACAAATATATGGCCTAAGCAATTTCCTACAATTTCCATGAT
GATGAAGTCTCCAAAGCCAGCCACAAGTATGATCCAGCATAGACATTTTGGCATTTTGACGCCTGCAGCATCGGGGCCGATATATGTAAGAGGATGGCATAGTGGAGTCA
TTAGGGAGGATATAAGGCAATGGATGTTGCAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTAAGACTGTCAAAGTCAGCAATGTCTCCCTGGGAGCGTCTGAACGAGATATCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGAATATCTTGAAATGCAGAG
TGAAAGTGAGCGGTCTCAAATTGCTTATGTAACCTTTAAGGACACGCAAGGAGCAGAGACTGCCGTTCTTTTGTCCGGAGCAACTATAGTGGATCTTTCTGTCAACATCA
CTCTGTGTCCTGATTATGAGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAAAGCACCTGGTGCTGCTGAATCTGCCTTTCGGAAAGCAGAGGATGTG
GTTAGTGGCATGCTAGCCAAGGGCTTTATCTTGGGTAAAGATGCACTCAACTCGGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACGGCTTCAGCTAAAGTTGC
TACATTGGATAAAAAAATTGGATTCACTGAGAAAATTAGTGCTGGTACATCGTTGATGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCGGAGAAGACTA
AATCAGCATTTGCAGTTGCGGAAGAAAAAGTTAGCAATGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTACTGATGCTTTCAATAAG
GTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTCGTGGTGTCGGAAGAAGAACAGAAAAAGAAGACGGTTGAAGATTTTGCTAAGGTTCATCTTTC
AGAATCCCCAAAAGCAGCATCAGCGCCCCCTGAGGAGCCTCAACAACGTCCCAAGCCCGAACCAGCTCAAGAGAGTATATGGTGCTCTAAGCATTGGCATCGGTGTCAGT
CTCTCTCTATAAGAAGAAAAAAAATCAACGGCCACAATGATTCTCCTACATCCATCGGTGATTTTAGCGAACAGAGCGAATTGCAGAGAGAAGGACAAGAAAGTTCTAGA
GAGAGAAAAATGGTGCTATGGGAAATCACTCTAGGAACCGCCTATTTCTTGGGGCTCAAGCGAACTTATCGCCTCGCCCTCAAGCTTCAACGTCGCATCGTTAGCCCAAA
GCTTCCCAAGATCCGTCAGTTTCTTCATCGACGTACCCGTGCTGTATTTGATGTAGCATTAAAGGTTCACTTGAACATACAGCAGAGAGACCTAGAAGTTGGTCGGAATC
TTGGTAACTGGATTCTACGATTGCTCGACAGATATAAACCATCAGCTCAAATTCGTAAACAGGACGGTGGATCGATGACGAATGCAACAAAACAGATTTCCAGCTCCTCC
TTGAAAATTCCAGAGGGCTCCCGGATCCTGAAGAAGCCAAACTCTTCCAGACAACTATTTACCTCATCAACAAATATATGGCCTAAGCAATTTCCTACAATTTCCATGAT
GATGAAGTCTCCAAAGCCAGCCACAAGTATGATCCAGCATAGACATTTTGGCATTTTGACGCCTGCAGCATCGGGGCCGATATATGTAAGAGGATGGCATAGTGGAGTCA
TTAGGGAGGATATAAGGCAATGGATGTTGCAAAACTAGAAACCAAGTTGATTGTTCTCTTCTTCTTTTTTTGTTTTGAGGCTAGATGGTTCCTCTGTACATGCTACAAGA
TCTTAGGAGGTTATGCCAACTGAAAACTGAAGCAGCACAAATGCCTAGATTTGCTGTTCTGCTTCTTGAGGCTTGAAGCTTTGGTCAATAACTGGTTTTCCTGGTGTTTG
TGTACTGTCTTTAGCCAAAATTATTTGCATGAAACCAGAGACTTTGTTAGAGATTGAATCGCCTTTTAGAATTAGAATCATGTATGCTTGTATGCTTTAAAGTTGTACCT
TTTGTCATTATTGAAAAGTAGAGTGGAAAATTTTTGGGTTTAAATTTTAAATCCCATTACATGTCTAGCCTCCAACCTATGTATTTAGCTTCTTGTAAAAGGAGATTTGC
TTTAGAGCCTACCTAGAGAGGTGAAGTGATAGAGATTTAATTTGAAAAGAGTATTTGACAACCACTCAAAATAGCTTTTAGAAAAACGAGTTTATGAAATAAGTTGGTTT
GAGAGACACTTGAAATCAAA
Protein sequenceShow/hide protein sequence
MSIKTVKVSNVSLGASERDIKEFFSFSGDIEYLEMQSESERSQIAYVTFKDTQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKAPGAAESAFRKAEDV
VSGMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTSLMSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVTDAFNK
VAKAAGEVGQKTKEKVVVSEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQESIWCSKHWHRCQSLSIRRKKINGHNDSPTSIGDFSEQSELQREGQESSR
ERKMVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKLPKIRQFLHRRTRAVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSMTNATKQISSSS
LKIPEGSRILKKPNSSRQLFTSSTNIWPKQFPTISMMMKSPKPATSMIQHRHFGILTPAASGPIYVRGWHSGVIREDIRQWMLQN