CuGenDBv2

Gene ID	Lsi07G011860
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Imidazole glycerol phosphate synthase hisHF, chloroplastic
Genome location	chr07:17401685..17402371
RNA-Seq Expression	Lsi07G011860
Synteny	Lsi07G011860
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148742.1 uncharacterized protein LOC101206077 [Cucumis sativus]

8.5e-106

91.23

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
        MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT SSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA

Query:  AIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAW
        AIPFL  RSRFVADS DDCSS+GNSAR SSFWSIF+SKSKK +DGGR+EAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGG  VRPPVKA+ W
Subjt:  AIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAW

Query:  YFPSPIKAFRQSKISKAVLTERSPLHRG
        YFPSPIKAFRQSK+ K VLTERSPLHRG
Subjt:  YFPSPIKAFRQSKISKAVLTERSPLHRG

XP_022923201.1 uncharacterized protein LOC111430968 [Cucurbita moschata]

6.5e-106

90.48

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR
        MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTT   SSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSR
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA
        SLAAIPFLRSRSRFVADS DDCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS G +VR PVKA
Subjt:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA

Query:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG
        +AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Subjt:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG

XP_022965250.1 uncharacterized protein LOC111465171 [Cucurbita maxima]

6.5e-106

90.04

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR
        MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCATTTTT   SSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSR
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA
        SLAAIPFLRSRSRFVADS DDCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS G +VR PVKA
Subjt:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA

Query:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG
        +AWYFPSPIKAFRQSK+SKAVLTERSPLHRG
Subjt:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG

XP_023552753.1 uncharacterized protein LOC111810294 [Cucurbita pepo subsp. pepo]

7.2e-105

89.61

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR
        MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCA+VRPCNCCATTTTT   SSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSR
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA
        SLAAIPFLRSRSRFVADS DDCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS G +VR P KA
Subjt:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA

Query:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG
        +AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Subjt:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG

XP_038905105.1 uncharacterized protein LOC120091238 [Benincasa hispida]

5.2e-111

93.86

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
        MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTT SSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA

Query:  AIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAW
        AIPFLRSRSRFV D+VDDCSS+GNSARASSFWSIFRSKSKKSHDGGR EA VEIDFRRRAKEVAE+EEAMRRKLMIRSRSVAV+DSGG  VRPPVKA+AW
Subjt:  AIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAW

Query:  YFPSPIKAFRQSKISKAVLTERSPLHRG
        YFPSPIK FRQSKISK+VLTERSPLHRG
Subjt:  YFPSPIKAFRQSKISKAVLTERSPLHRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6G5 Uncharacterized protein

4.1e-106

91.23

Show/hide

Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
        MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT SSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA

Query:  AIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAW
        AIPFL  RSRFVADS DDCSS+GNSAR SSFWSIF+SKSKK +DGGR+EAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGG  VRPPVKA+ W
Subjt:  AIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAW

Query:  YFPSPIKAFRQSKISKAVLTERSPLHRG
        YFPSPIKAFRQSK+ K VLTERSPLHRG
Subjt:  YFPSPIKAFRQSKISKAVLTERSPLHRG

A0A1S3CQR3 uncharacterized protein LOC103503260

1.8e-101

89.96

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
        MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT SSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA

Query:  AIPFLRSRSRFVADSVDDCSSAG-NSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARA
        AIPFL  RSRFVADSVDDCSS+G NSAR SSFWSIFRSKSKK +DGG      EIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGG  VRPPVK R 
Subjt:  AIPFLRSRSRFVADSVDDCSSAG-NSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARA

Query:  WYFPSPIKAFRQSKISKAVLTERSPLHRG
        WYFPSPIKAFRQ+KISK VLTERSPLHRG
Subjt:  WYFPSPIKAFRQSKISKAVLTERSPLHRG

A0A5A7UH78 Uncharacterized protein

1.8e-101

89.96

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
        MAFY DEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATT TTTT SSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLA

Query:  AIPFLRSRSRFVADSVDDCSSAG-NSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARA
        AIPFL  RSRFVADSVDDCSS+G NSAR SSFWSIFRSKSKK +DGG      EIDFRRRAKEVAEVEEAMRRKLMIRSRSVAV+DSGG  VRPPVK R 
Subjt:  AIPFLRSRSRFVADSVDDCSSAG-NSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARA

Query:  WYFPSPIKAFRQSKISKAVLTERSPLHRG
        WYFPSPIKAFRQ+KISK VLTERSPLHRG
Subjt:  WYFPSPIKAFRQSKISKAVLTERSPLHRG

A0A6J1E664 uncharacterized protein LOC111430968

3.2e-106

90.48

Show/hide

Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR
        MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTT   SSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSR
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA
        SLAAIPFLRSRSRFVADS DDCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS G +VR PVKA
Subjt:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA

Query:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG
        +AWYFPSPIKAFRQSK+ KAVLTERSPLHRG
Subjt:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG

A0A6J1HN71 uncharacterized protein LOC111465171

3.2e-106

90.04

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Query:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR
        MAFY DEDD+WKCPKHPSKRRRIGICPLCLRDRL++LCPDCANVRPCNCCATTTTT   SSSSSSSSSFSRFSSAD   LGSVGRLSNLIDGEPAFRRSR
Subjt:  MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSAD---LGSVGRLSNLIDGEPAFRRSR

Query:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA
        SLAAIPFLRSRSRFVADS DDCSS+GNSARASSFWSIFRSK+KKS DGGRIEAAVE DF+RRAKEVAEVEEAMRR LMIRSRSVAVSDS G +VR PVKA
Subjt:  SLAAIPFLRSRSRFVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKA

Query:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG
        +AWYFPSPIKAFRQSK+SKAVLTERSPLHRG
Subjt:  RAWYFPSPIKAFRQSKISKAVLTERSPLHRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32690.1 unknown protein

1.4e-29

41.53

Show/hide

Query:  DEDDLWKCPKHPSKRRRI---GICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFS------RFSSADLGSVGRLSNLIDGEPAFRRS
        DED   +C KH SKR      G+CP CL +RL +LCPDCA+  PC+ C++    + S SSSSSSSSFS       F+ + +GSVGR+++LI+ EPAFRRS
Subjt:  DEDDLWKCPKHPSKRRRI---GICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFS------RFSSADLGSVGRLSNLIDGEPAFRRS

Query:  RSLAAIPFLRSRSRFVADSVDDCS-SAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRP--
        +S+ AIP          DSV D     G S + SSFW IF         G R +                     +  +M +SRSVAV+   G    P  
Subjt:  RSLAAIPFLRSRSRFVADSVDDCS-SAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRP--

Query:  -PVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG
           K + W FPSPIK FRQS++SK +  +RSPL+RG
Subjt:  -PVKARAWYFPSPIKAFRQSKISKAVLTERSPLHRG

AT2G35200.1 unknown protein

4.3e-23

36.65

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Query:  KCPKHPSKRRRI-GICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSR
        KC +H  +   + G+CP CL +RL +LCPDCA+  PC+C    T   + SS      SF+R     +GSVGR++NLI+ EPAFRRS S+    F  ++  
Subjt:  KCPKHPSKRRRI-GICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSR

Query:  FVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRP-PV--KARAWYFPSPIK
         + ++  D        R    W +FR   ++     +I+AA                     K+M +S SVA    G +   P PV  K   WYFPSPIK
Subjt:  FVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRP-PV--KARAWYFPSPIK

Query:  AFRQSKISKAVLTERSPLHRG
         FRQS++SK +  +RSPL+RG
Subjt:  AFRQSKISKAVLTERSPLHRG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTTCTATTGCGATGAAGACGACCTATGGAAATGTCCAAAACACCCTTCCAAACGCCGGAGGATCGGAATCTGTCCTCTCTGCCTCCGTGACCGTCTCGTCACTCT
CTGTCCTGACTGCGCCAACGTCCGCCCCTGTAACTGTTGTGCCACCACCACTACTACCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTCGTTTCTCCT
CTGCCGACCTCGGATCCGTCGGCCGTCTCTCCAATCTCATCGACGGCGAACCGGCTTTCCGTCGCTCTCGCTCTCTCGCTGCGATTCCGTTTCTACGATCGAGATCGCGA
TTCGTCGCTGATTCCGTCGATGATTGTTCCTCGGCCGGTAATAGTGCTAGAGCGTCGTCGTTTTGGTCGATTTTCAGGTCGAAGAGTAAGAAGAGCCACGATGGCGGAAG
AATCGAAGCGGCTGTGGAAATCGATTTCAGACGGAGAGCGAAGGAAGTAGCGGAAGTTGAAGAGGCGATGAGACGGAAATTGATGATCCGGTCGAGATCGGTTGCGGTTT
CCGATTCCGGTGGGATGTATGTCCGGCCGCCGGTGAAGGCTAGGGCATGGTACTTTCCGAGTCCGATCAAAGCATTCCGGCAATCGAAGATTTCCAAGGCGGTTCTCACG
GAACGGTCTCCGTTGCACAGAGGTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAFYCDEDDLWKCPKHPSKRRRIGICPLCLRDRLVTLCPDCANVRPCNCCATTTTTTTSSSSSSSSSSFSRFSSADLGSVGRLSNLIDGEPAFRRSRSLAAIPFLRSRSR
FVADSVDDCSSAGNSARASSFWSIFRSKSKKSHDGGRIEAAVEIDFRRRAKEVAEVEEAMRRKLMIRSRSVAVSDSGGMYVRPPVKARAWYFPSPIKAFRQSKISKAVLT
ERSPLHRG

Lsi07G011860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome