; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G011940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G011940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Genome locationchr07:17441679..17442398
RNA-Seq ExpressionLsi07G011940
SyntenyLsi07G011940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650024.1 hypothetical protein Csa_011560 [Cucumis sativus]5.7e-6872.92Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG
        MAILR  LCL+FLL V LGLASAT TLLDYD  T  YGYDRP+PRVGYDP H DESYD AYGGSSSRGHGIGDSALGGSG YEGGG  D GYG R++DRG
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG

Query:  VGYGN-GGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHG
        VGYGN GGGYG V GHGDGYG+NGGG YGDRYGPSLGGSGYGS              G +G  NGY D    G GARDN +GDS G+G RD+GYG GG  
Subjt:  VGYGN-GGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHG

Query:  GGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
         G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Subjt:  GGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

XP_008449165.1 PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo]3.3e-7676.15Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG
        MAILR  LCL+FLL VGLGLASAT TLLDYD  T HYGYDRP+PRVGYDP HRDESYDNAYGGSSSRGHGIGDSALGGSG YEGGG RD GYG RND+RG
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG

Query:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGG
        VGYGNGGGYG V GHGDGYG+NGGGGYGDRYGPSLGGSGYGS              G +G  NGY D   +GYG RDNG+GDS G+  RD+GYG GG   
Subjt:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGG

Query:  GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
        G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Subjt:  GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

XP_011652712.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]5.7e-6872.92Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG
        MAILR  LCL+FLL V LGLASAT TLLDYD  T  YGYDRP+PRVGYDP H DESYD AYGGSSSRGHGIGDSALGGSG YEGGG  D GYG R++DRG
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG

Query:  VGYGN-GGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHG
        VGYGN GGGYG V GHGDGYG+NGGG YGDRYGPSLGGSGYGS              G +G  NGY D    G GARDN +GDS G+G RD+GYG GG  
Subjt:  VGYGN-GGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHG

Query:  GGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
         G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Subjt:  GGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

XP_038903421.1 glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]1.3e-7273.88Show/hide
Query:  LLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNG
        +LC  FL+ V  GLASA  TLLDYD  T HY YDRPTPRVGYDPSHRD SYDNAYG SS RG+GIGDSALGGSG+YEG  G DSGYGGRNDDRGVGYGNG
Subjt:  LLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNG

Query:  GGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGG---SNGYGDS-----RDNGYGARDNGHGDSRGYGARDNGYGVGGH
        GGYG + GHG+GYG NGGG Y +R GPSLGGSGYGSG+GYDQGRD+GVGYGSRGG   SNGYGDS     RDNGYGA DN +G   G G    GYGVGGH
Subjt:  GGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGG---SNGYGDS-----RDNGYGARDNGHGDSRGYGARDNGYGVGGH

Query:  GGGHDN----NGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
        GGG  +    NGGVHGG+YDN+KGSG EGGYDGGYAVK+SIS  N
Subjt:  GGGHDN----NGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

XP_038903641.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]6.7e-7774.61Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG
        MAI R +LC   LL V LGLASA   LLDYD  T HY YDRP+PRVGYDPSHRD SYDN+YGG S+RG+GIGDSALGGSGRYEGGG  +  Y   NDDRG
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG

Query:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGG---SNGYGDSRDNGYGARDNGHGDSRGYGARDN------
        VGYGNGGGYG V GHGDGYGSNGGGGY  RYGPSLGGSGYG+GNGYDQ RD+GVGYGS+GG   SN YGDSR  GYGARDNG+GDSRGYGARDN      
Subjt:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGG---SNGYGDSRDNGYGARDNGHGDSRGYGARDN------

Query:  ----GYGVGGHGG----GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
            GYGVGGHGG    G   NGGVHGG+YDNSKGSGEEGGYDGGYA+KNSIS +N
Subjt:  ----GYGVGGHGG----GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

TrEMBL top hitse value%identityAlignment
A0A0A0L1V3 Glycine-rich protein-12.7e-6872.92Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG
        MAILR  LCL+FLL V LGLASAT TLLDYD  T  YGYDRP+PRVGYDP H DESYD AYGGSSSRGHGIGDSALGGSG YEGGG  D GYG R++DRG
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG

Query:  VGYGN-GGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHG
        VGYGN GGGYG V GHGDGYG+NGGG YGDRYGPSLGGSGYGS              G +G  NGY D    G GARDN +GDS G+G RD+GYG GG  
Subjt:  VGYGN-GGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHG

Query:  GGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
         G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Subjt:  GGHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

A0A1S3BM26 glycine-rich cell wall structural protein 1.0-like2.2e-6255.99Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRD-----------
        MAI R  LC+SFLL V LGLASA  TLLDYD  T  Y YD PTPRVGYDPSHRD+SYDNAYGGSS+RG+G+GDSALGGSGRYEGGGG D           
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRD-----------

Query:  -----------------------------------------------------------SGYGGRNDDRGVGYGNGGGYGSVRGHGDGYGSNGGGGYGDR
                                                                   +GYGGRNDDRGVGYGNGGGYG V GHGDGYG+N GGGYGDR
Subjt:  -----------------------------------------------------------SGYGGRNDDRGVGYGNGGGYGSVRGHGDGYGSNGGGGYGDR

Query:  YGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYA
        Y PSLGGSGYG+              G +G  NGY D    GYG  DNG+GDS G+G RD+GYG GG   G   NGGVHGG+YDNSKGSGE GG DGGYA
Subjt:  YGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYA

Query:  VKNSISKEN
        VKNSISKEN
Subjt:  VKNSISKEN

A0A1S3BMC4 glycine-rich cell wall structural protein 1.8-like1.6e-7676.15Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG
        MAILR  LCL+FLL VGLGLASAT TLLDYD  T HYGYDRP+PRVGYDP HRDESYDNAYGGSSSRGHGIGDSALGGSG YEGGG RD GYG RND+RG
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG

Query:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGG
        VGYGNGGGYG V GHGDGYG+NGGGGYGDRYGPSLGGSGYGS              G +G  NGY D   +GYG RDNG+GDS G+  RD+GYG GG   
Subjt:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGG

Query:  GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
        G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Subjt:  GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

A0A5A7UEU3 Glycine-rich cell wall structural protein 1.0-like2.2e-6255.99Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRD-----------
        MAI R  LC+SFLL V LGLASA  TLLDYD  T  Y YD PTPRVGYDPSHRD+SYDNAYGGSS+RG+G+GDSALGGSGRYEGGGG D           
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRD-----------

Query:  -----------------------------------------------------------SGYGGRNDDRGVGYGNGGGYGSVRGHGDGYGSNGGGGYGDR
                                                                   +GYGGRNDDRGVGYGNGGGYG V GHGDGYG+N GGGYGDR
Subjt:  -----------------------------------------------------------SGYGGRNDDRGVGYGNGGGYGSVRGHGDGYGSNGGGGYGDR

Query:  YGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYA
        Y PSLGGSGYG+              G +G  NGY D    GYG  DNG+GDS G+G RD+GYG GG   G   NGGVHGG+YDNSKGSGE GG DGGYA
Subjt:  YGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDGGYA

Query:  VKNSISKEN
        VKNSISKEN
Subjt:  VKNSISKEN

A0A5A7UHU2 Glycine-rich cell wall structural protein 1.8-like1.6e-7676.15Show/hide
Query:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG
        MAILR  LCL+FLL VGLGLASAT TLLDYD  T HYGYDRP+PRVGYDP HRDESYDNAYGGSSSRGHGIGDSALGGSG YEGGG RD GYG RND+RG
Subjt:  MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRG

Query:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGG
        VGYGNGGGYG V GHGDGYG+NGGGGYGDRYGPSLGGSGYGS              G +G  NGY D   +GYG RDNG+GDS G+  RD+GYG GG   
Subjt:  VGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGG

Query:  GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN
        G   NGGVHGG+YDNSKGSGEEGGYDGGYAVKNSISK N
Subjt:  GHDNNGGVHGGQYDNSKGSGEEGGYDGGYAVKNSISKEN

SwissProt top hitse value%identityAlignment
P10496 Glycine-rich cell wall structural protein 1.82.7e-0442.86Show/hide
Query:  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPS-------LGGSGYGSGNGYDQGRDNG
        YG     G G G    GG+G   G GG   G GG     G G G GGGY +V  HG GYG   GGG G  YG          GG G G+G GY  G ++G
Subjt:  YGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYGSVRGHGDGYGSNGGGGYGDRYGPS-------LGGSGYGSGNGYDQGRDNG

Query:  VGY-GSRGGSNGYGDSRDN---GYGARDNGHGDSRG----YGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDG
         GY G +GG  GYG   D+   GYG  + G G S G     GA   GYG G  GGG    GG HGG Y    G G  GG+ G
Subjt:  VGY-GSRGGSNGYGDSRDN---GYGARDNGHGDSRG----YGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSGEEGGYDG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCCTTAGAGGGTTATTGTGCCTTTCATTTCTTCTCTTGGTTGGGTTAGGTTTAGCTTCGGCTACCGGAACTCTTCTTGATTATGATTCCCATACACCTCACTA
TGGTTATGATCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGTTCTAGTAGAGGACATGGAATTGGAGACT
CCGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATACGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGA
AGTGTAAGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCTATGGAGATCGTTATGGGCCTTCCCTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGA
CCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGCTATGGTGATTCACGTGACAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCAC
GTGGATATGGAGCACGTGATAATGGCTATGGAGTCGGAGGTCATGGTGGTGGTCATGATAATAATGGAGGTGTTCATGGAGGACAATATGATAATAGCAAAGGAAGTGGA
GAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCCTTAGAGGGTTATTGTGCCTTTCATTTCTTCTCTTGGTTGGGTTAGGTTTAGCTTCGGCTACCGGAACTCTTCTTGATTATGATTCCCATACACCTCACTA
TGGTTATGATCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGTTCTAGTAGAGGACATGGAATTGGAGACT
CCGCTCTTGGAGGTTCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTGGATACGGAGGTCGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGA
AGTGTAAGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCTATGGAGATCGTTATGGGCCTTCCCTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGA
CCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGCTATGGTGATTCACGTGACAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCAC
GTGGATATGGAGCACGTGATAATGGCTATGGAGTCGGAGGTCATGGTGGTGGTCATGATAATAATGGAGGTGTTCATGGAGGACAATATGATAATAGCAAAGGAAGTGGA
GAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA
Protein sequenceShow/hide protein sequence
MAILRGLLCLSFLLLVGLGLASATGTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSRGHGIGDSALGGSGRYEGGGGRDSGYGGRNDDRGVGYGNGGGYG
SVRGHGDGYGSNGGGGYGDRYGPSLGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSRDNGYGARDNGHGDSRGYGARDNGYGVGGHGGGHDNNGGVHGGQYDNSKGSG
EEGGYDGGYAVKNSISKEN