; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G011950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G011950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Genome locationchr07:17445518..17451672
RNA-Seq ExpressionLsi07G011950
SyntenyLsi07G011950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577707.1 hypothetical protein SDJN03_25281, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4289.04Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG
        LA AARTLVAYD NV  PVLG VS+GYGGGEGGGSGYGV+ GY GGGGGGRGGGGGS  GGVGYG+GGGEGSGAGYGGGE+RGYGNGGGGGG   G GGG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG

Query:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG
        SG GYGPGGGYGSGGGAGSGGGYGSGG GYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSG GGHGGGGGGGSGGGYGGGG NGGGYGSGGGEG
Subjt:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG

Query:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQ
        G SG GAGGHGGGGGGGSGGGY GGGA+
Subjt:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQ

XP_022923391.1 glycine-rich cell wall structural protein 1.8-like isoform X1 [Cucurbita moschata]6.9e-4689.21Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGY-GGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGG
        LA AARTLVAYD NV  PVLG VS+GYGGGEGGGSGYGV+ GY GGGGGGGRGGGGGS  GGVGYG+GGGEGSGAGYGGGE+RGYGNGGGGGG   G GG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGY-GGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGG

Query:  GSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGE
        GSG GYGPGGGYGSGGGAGSGGGYGSGG GYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGG NGGGYGSGGG 
Subjt:  GSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGE

Query:  GGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR
        GG SG GAGGHGGGGGGGSGGGY GGGAQGGGYGAGGG G+
Subjt:  GGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR

XP_023007588.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima]2.9e-4486.99Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG
        LA AARTLVAYD NV  PVLG VSIGYGGGEGGGSGYGV+ GY GGGGGGRGGGGGS  GGVGYG+GGGEGSGAGYGGGE+RGYGNGGGGGG   G GGG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG

Query:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGAN------GGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYG
        SG GYGPGGGYGSGGGAGSGGGYGSGG GYGGGGGGGSGGGGGYGAGGAN      GGGYGSGGGQGG SGSGAGGHGGGGGGGSGGGYGGGG NGGGYG
Subjt:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGAN------GGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYG

Query:  SGGGEGGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR
        SGGGEGG SG GAGGHGGG GGGSGGGY GGGAQGGGYGAGGG G+
Subjt:  SGGGEGGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR

XP_023552301.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]4.9e-4487.92Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG
        LA AARTLVAYDGNV  PVLG VS+    G GGGSGYGV+ GY GGGGGGRGGGGGS  GGVGYG+GGGEGSGAGYGGGE+RGYGNGGGGGG   G GGG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG

Query:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG
        SG GYGPGGGYGSGGGAGSGGGYGSGG GYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGG NGGGYGSGGGEG
Subjt:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG

Query:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR
        G SG GAGGHGGGGGGGSGGGY GGGAQGGGYGAGGG G+
Subjt:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR

XP_038903688.1 glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]9.0e-5492.89Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG
        LA AARTL+AYDGNVHAPVLGHVSIGYGGGEG G GYGV+ GYGGGGGGGRGGGGGST+GGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG

Query:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG
         GVGYGPGGGYG+GGGAGSGGGYG+GGSGYGGGGGGG+GGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGG+G
Subjt:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG

Query:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGG
        G SG GAGG GGGGGGGSGGGY GGGAQGGGYGAGGG G
Subjt:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L3Y5 Uncharacterized protein2.5e-4186.59Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGS--GGG
        LA AARTL+AYDG+VHAPVLGH S+GYGGGEG GSGYGVS GYGGGGGGGRGGGGGSTNGGVGYG+GGGEGSGAGYGGGEERGYGNGGGGGGGGS  GGG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGS--GGG

Query:  GGSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGG----SGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYG
        GGSGV YGP GGYGSG G GSGGGYG GGSGYGGGGGGG     GG GGYGAG A+GGGYGSGGGQGGGSGSG GGHGGGGGGG GGGYG GG NGGGYG
Subjt:  GGSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGG----SGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYG

Query:  SGGGEGGSSGGGAGGHGGGGGGGSGGGY-DGGGAQGGGYGAGGGGG
        SGGGEGG SG GAGGHGGGGGGGSGGGY  GGGAQGGGYG GGG G
Subjt:  SGGGEGGSSGGGAGGHGGGGGGGSGGGY-DGGGAQGGGYGAGGGGG

A0A1S4DY03 glycine-rich cell wall structural protein 1.8-like1.0e-2367.36Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG
        LA AARTL+AYDG+V  PVLGH S+GYGGGEGGGSGYG+S GYGGGGGGG GGGGGSTNGG GYG+GGGEGS                            
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG

Query:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG
                                  GSGYGGGGGGG+GGGGGYGAG A+GGGYGSGGGQGGGSGSG GGHGGGGGGG GGGYG GG NGGGYGSGGGEG
Subjt:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEG

Query:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGG
        G SG GAGGHGGGGGGGSGGGY GGGAQGGGYG GGG G
Subjt:  GSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGG

A0A6J1E5Z3 glycine-rich cell wall structural protein 1.8-like isoform X13.3e-4689.21Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGY-GGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGG
        LA AARTLVAYD NV  PVLG VS+GYGGGEGGGSGYGV+ GY GGGGGGGRGGGGGS  GGVGYG+GGGEGSGAGYGGGE+RGYGNGGGGGG   G GG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGY-GGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGG

Query:  GSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGE
        GSG GYGPGGGYGSGGGAGSGGGYGSGG GYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGG NGGGYGSGGG 
Subjt:  GSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGE

Query:  GGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR
        GG SG GAGGHGGGGGGGSGGGY GGGAQGGGYGAGGG G+
Subjt:  GGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR

A0A6J1E9J4 glycine-rich cell wall structural protein 1.8-like isoform X21.0e-3183.18Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGY-GGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGG
        LA AARTLVAYD NV  PVLG VS+GYGGGEGGGSGYGV+ GY GGGGGGGRGGGGGS  GGVGYG+GGGEGSGAGYGGGE+RGYGNGGGGGG   G GG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGY-GGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGG

Query:  GSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQ------GGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGY
        GSG GYGPGGGYGSGGGAGSGGGYGSGG GYGGGGGGGSGGGGGYGAGGANGGGYGSGGG       GGGSGSGAGGHGGGGGGGSGGGYGGGG  GGGY
Subjt:  GSGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQ------GGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGY

Query:  GSGGGEGGSSGGGAGGHGGG
        G+GGG      G  GGHGGG
Subjt:  GSGGGEGGSSGGGAGGHGGG

A0A6J1L823 glycine-rich cell wall structural protein 1.8-like1.4e-4486.99Show/hide
Query:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG
        LA AARTLVAYD NV  PVLG VSIGYGGGEGGGSGYGV+ GY GGGGGGRGGGGGS  GGVGYG+GGGEGSGAGYGGGE+RGYGNGGGGGG   G GGG
Subjt:  LAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGG

Query:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGAN------GGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYG
        SG GYGPGGGYGSGGGAGSGGGYGSGG GYGGGGGGGSGGGGGYGAGGAN      GGGYGSGGGQGG SGSGAGGHGGGGGGGSGGGYGGGG NGGGYG
Subjt:  SGVGYGPGGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGAN------GGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYG

Query:  SGGGEGGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR
        SGGGEGG SG GAGGHGGG GGGSGGGY GGGAQGGGYGAGGG G+
Subjt:  SGGGEGGSSGGGAGGHGGGGGGGSGGGYDGGGAQGGGYGAGGGGGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGTTAGCTTTTGCAGCTAGAACCCTTGTTGCCTATGATGGCAATGTCCATGCCCCAGTATTAGGGCATGTTTCTATTGGATATGGTGGTGGAGAAGGCGGTGG
TAGTGGATATGGAGTTTCCGGTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGCTCTACAAATGGAGGTGTTGGATATGGAAGTGGTGGAGGTGAAG
GAAGTGGCGCTGGATATGGAGGTGGAGAAGAACGTGGTTATGGCAATGGTGGTGGTGGTGGAGGAGGAGGAAGTGGTGGTGGTGGTGGAAGCGGTGTCGGATATGGCCCG
GGCGGTGGTTATGGAAGTGGAGGTGGAGCTGGGTCTGGTGGTGGTTATGGTAGTGGGGGATCGGGTTATGGAGGTGGTGGTGGTGGTGGAAGTGGAGGCGGTGGTGGTTA
TGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGTGGTGGTGGACAAGGAGGCGGCTCAGGGAGTGGAGCGGGAGGGCATGGAGGTGGTGGAGGAGGTGGCTCAGGAG
GTGGCTATGGTGGAGGAGGAGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGTAGCTCAGGAGGTGGTGCAGGAGGGCACGGAGGTGGCGGAGGAGGTGGC
TCCGGTGGCGGATATGATGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGGGTGGAAGATATACAAATATCAAAAAGGTGTACCAAATTCAAAACAGCAC
AAGATCTATGATCAATCTAAATATAACTCAACTAAGTATATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGGTTAGCTTTTGCAGCTAGAACCCTTGTTGCCTATGATGGCAATGTCCATGCCCCAGTATTAGGGCATGTTTCTATTGGATATGGTGGTGGAGAAGGCGGTGG
TAGTGGATATGGAGTTTCCGGTGGATATGGCGGTGGTGGCGGAGGAGGACGTGGAGGTGGAGGTGGCTCTACAAATGGAGGTGTTGGATATGGAAGTGGTGGAGGTGAAG
GAAGTGGCGCTGGATATGGAGGTGGAGAAGAACGTGGTTATGGCAATGGTGGTGGTGGTGGAGGAGGAGGAAGTGGTGGTGGTGGTGGAAGCGGTGTCGGATATGGCCCG
GGCGGTGGTTATGGAAGTGGAGGTGGAGCTGGGTCTGGTGGTGGTTATGGTAGTGGGGGATCGGGTTATGGAGGTGGTGGTGGTGGTGGAAGTGGAGGCGGTGGTGGTTA
TGGTGCAGGAGGAGCAAATGGAGGTGGATATGGAAGTGGTGGTGGACAAGGAGGCGGCTCAGGGAGTGGAGCGGGAGGGCATGGAGGTGGTGGAGGAGGTGGCTCAGGAG
GTGGCTATGGTGGAGGAGGAGAAAATGGTGGTGGATATGGAAGTGGCGGAGGAGAAGGAGGTAGCTCAGGAGGTGGTGCAGGAGGGCACGGAGGTGGCGGAGGAGGTGGC
TCCGGTGGCGGATATGATGGTGGAGGTGCACAAGGAGGGGGATATGGAGCTGGCGGAGGGGGTGGAAGATATACAAATATCAAAAAGGTGTACCAAATTCAAAACAGCAC
AAGATCTATGATCAATCTAAATATAACTCAACTAAGTATATCATAA
Protein sequenceShow/hide protein sequence
MKRLAFAARTLVAYDGNVHAPVLGHVSIGYGGGEGGGSGYGVSGGYGGGGGGGRGGGGGSTNGGVGYGSGGGEGSGAGYGGGEERGYGNGGGGGGGGSGGGGGSGVGYGP
GGGYGSGGGAGSGGGYGSGGSGYGGGGGGGSGGGGGYGAGGANGGGYGSGGGQGGGSGSGAGGHGGGGGGGSGGGYGGGGENGGGYGSGGGEGGSSGGGAGGHGGGGGGG
SGGGYDGGGAQGGGYGAGGGGGRYTNIKKVYQIQNSTRSMINLNITQLSIS