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Lsi07G011990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G011990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:17492151..17492483
RNA-Seq ExpressionLsi07G011990
SyntenyLsi07G011990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650028.1 hypothetical protein Csa_011525 [Cucumis sativus]6.5e-3574.55Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEF-ESERSWSGNLSFRPHDRQIRG--------GFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRD
        MSLNCLSCQ+LQRTDSERHRD+QVQTYY SDEF  SERSWSGNL  RP+     G        GFRG+A+ KVAPI HRRA+SFGGKEPRL+RSSGMRRD
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEF-ESERSWSGNLSFRPHDRQIRG--------GFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRD

Query:  WSFEDLRTIR
        WSFEDLR IR
Subjt:  WSFEDLRTIR

XP_008448684.1 PREDICTED: uncharacterized protein LOC103490783 [Cucumis melo]2.3e-4081.25Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGG-FRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLR
        MSLNCLSCQLLQRTDSERHRD+Q+QTYY SDEF+ S+RSWSGNLS     RQ RGG FRG+A+ KVAP+ HRRA+SFGGKEPRLVRSSGMRRDWSFEDLR
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGG-FRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLR

Query:  TIREEREPSANS
        TIREE+EPS NS
Subjt:  TIREEREPSANS

XP_023007608.1 uncharacterized protein LOC111500186 [Cucurbita maxima]4.2e-2662.39Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRR-----AMSFGGKEPRLVRSSGMRRDWSFE
        M+LNCLSCQLLQRTDSER  D Q+Q YY+     S RSWSGNLSFRP DR  +   R L E +  P++ RR      +S G KEP+LVRSSGMRRDWSFE
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRR-----AMSFGGKEPRLVRSSGMRRDWSFE

Query:  DLRTIREER
        DLR IREE+
Subjt:  DLRTIREER

XP_031737872.1 uncharacterized protein LOC116402546 [Cucumis sativus]1.6e-3873.95Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEF-ESERSWSGNLSFRPHDRQIRG--------GFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRD
        MSLNCLSCQ+LQRTDSERHRD+QVQTYY SDEF  SERSWSGNL  RP+     G        GFRG+A+ KVAPI HRRA+SFGGKEPRL+RSSGMRRD
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEF-ESERSWSGNLSFRPHDRQIRG--------GFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRD

Query:  WSFEDLRTIREEREPSANS
        WSFEDLR IREE++PS NS
Subjt:  WSFEDLRTIREEREPSANS

XP_038905810.1 uncharacterized protein LOC120091761 [Benincasa hispida]3.9e-4891.74Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLRT
        MSLNCLSCQ+LQRTDSERHRDQQ+QTYYASDEF+ SERSWSGNLSFRPHDR  RGGFRGL E KVAPISHRRA+SFGGKEPRLVRSSGMRRDWSFEDLRT
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLRT

Query:  IREEREPSA
        IREEREPSA
Subjt:  IREEREPSA

TrEMBL top hitse value%identityAlignment
A0A0A0L198 Uncharacterized protein2.7e-3976.52Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEF-ESERSWSGNLSFRPHDRQIRG----GFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFE
        MSLNCLSCQ+LQRTDSERHRD+QVQTYY SDEF  SERSWSGNL  RP+     G    GFRG+A+ KVAPI HRRA+SFGGKEPRL+RSSGMRRDWSFE
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEF-ESERSWSGNLSFRPHDRQIRG----GFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFE

Query:  DLRTIREEREPSANS
        DLR IREE++PS NS
Subjt:  DLRTIREEREPSANS

A0A1S3BJN6 uncharacterized protein LOC1034907831.1e-4081.25Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGG-FRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLR
        MSLNCLSCQLLQRTDSERHRD+Q+QTYY SDEF+ S+RSWSGNLS     RQ RGG FRG+A+ KVAP+ HRRA+SFGGKEPRLVRSSGMRRDWSFEDLR
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGG-FRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLR

Query:  TIREEREPSANS
        TIREE+EPS NS
Subjt:  TIREEREPSANS

A0A5A7UAS3 Uncharacterized protein1.1e-4081.25Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGG-FRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLR
        MSLNCLSCQLLQRTDSERHRD+Q+QTYY SDEF+ S+RSWSGNLS     RQ RGG FRG+A+ KVAP+ HRRA+SFGGKEPRLVRSSGMRRDWSFEDLR
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFE-SERSWSGNLSFRPHDRQIRGG-FRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLR

Query:  TIREEREPSANS
        TIREE+EPS NS
Subjt:  TIREEREPSANS

A0A6J1GL99 uncharacterized protein LOC1114549682.3e-2560.17Show/hide
Query:  MSLNCLSCQL-LQRTDSERHRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRR-----AMSFG--GKEPRLVRSSGMRRDW
        MSLNCLSCQL LQR+DS+  +D +   Y+       +RSWSGNLSFRP  RQ   GFR   E KVAP+ HRR     A++FG  GKEPRL+RS+GMRRDW
Subjt:  MSLNCLSCQL-LQRTDSERHRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRR-----AMSFG--GKEPRLVRSSGMRRDW

Query:  SFEDLRTIREEREPSANS
        SFEDLR IRE++E S NS
Subjt:  SFEDLRTIREEREPSANS

A0A6J1L834 uncharacterized protein LOC1115001862.0e-2662.39Show/hide
Query:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRR-----AMSFGGKEPRLVRSSGMRRDWSFE
        M+LNCLSCQLLQRTDSER  D Q+Q YY+     S RSWSGNLSFRP DR  +   R L E +  P++ RR      +S G KEP+LVRSSGMRRDWSFE
Subjt:  MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRR-----AMSFGGKEPRLVRSSGMRRDWSFE

Query:  DLRTIREER
        DLR IREE+
Subjt:  DLRTIREER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein3.1e-1140.74Show/hide
Query:  MSLNCLSCQLLQRTDSER----HRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRRAMSFGG-KEPRLVRSSGMRRDWSFE
        MSLNCL+C +LQRTDS+R     +D   +  +A+  FE       N S  P  R++  G R L    +        M +G   EP+LVRSSG+RRDWSFE
Subjt:  MSLNCLSCQLLQRTDSER----HRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRRAMSFGG-KEPRLVRSSGMRRDWSFE

Query:  DLRTIREE
        DL+  +++
Subjt:  DLRTIREE

AT5G46770.1 unknown protein6.5e-0939.69Show/hide
Query:  MSLNCLSCQLLQRTDSERHRD-----------QQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAE--KKVAPISHRRAMSFGG----------
        MSLNCLSCQ L RTDS +  D             V            R+WSGNLS R +++  R G   LA   KKV  I H R     G          
Subjt:  MSLNCLSCQLLQRTDSERHRD-----------QQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAE--KKVAPISHRRAMSFGG----------

Query:  KEPRLVRSSGMRRDWSFEDLR---TIREERE
        ++P+LVRS+G+RR+WSFE+LR    I E+R+
Subjt:  KEPRLVRSSGMRRDWSFEDLR---TIREERE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGAACGGACTCCGAGAGACACCGCGACCAGCAGGTCCAAACTTACTATGCCTCCGATGAGTTCGAATCGGAGAG
AAGCTGGTCCGGCAATCTCTCATTCCGCCCTCACGATCGCCAGATTAGAGGAGGGTTTCGGGGTCTGGCGGAGAAAAAGGTGGCTCCGATCAGTCACCGCCGCGCCATGT
CGTTCGGCGGGAAGGAGCCGAGGTTGGTTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTGAGAACTATTCGAGAAGAAAGGGAACCATCAGCCAATTCC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTGAATTGCCTCTCATGTCAACTCTTACAGAGAACGGACTCCGAGAGACACCGCGACCAGCAGGTCCAAACTTACTATGCCTCCGATGAGTTCGAATCGGAGAG
AAGCTGGTCCGGCAATCTCTCATTCCGCCCTCACGATCGCCAGATTAGAGGAGGGTTTCGGGGTCTGGCGGAGAAAAAGGTGGCTCCGATCAGTCACCGCCGCGCCATGT
CGTTCGGCGGGAAGGAGCCGAGGTTGGTTAGAAGCTCAGGGATGAGGAGGGATTGGAGCTTTGAGGATCTGAGAACTATTCGAGAAGAAAGGGAACCATCAGCCAATTCC
TGA
Protein sequenceShow/hide protein sequence
MSLNCLSCQLLQRTDSERHRDQQVQTYYASDEFESERSWSGNLSFRPHDRQIRGGFRGLAEKKVAPISHRRAMSFGGKEPRLVRSSGMRRDWSFEDLRTIREEREPSANS