; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G012130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G012130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein 6
Genome locationchr07:17698024..17698311
RNA-Seq ExpressionLsi07G012130
SyntenyLsi07G012130
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577696.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2576.09Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI
        +V+KAS KT EERKI EERRKAA AEAKRELHEAKARHAAQKLR R+S VLG  LH HQPP+EG +A     ANVPAYPIA+PEGYYPGH+I
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI

XP_004148757.1 late embryogenesis abundant protein 6 [Cucumis sativus]3.7e-3186.02Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGA-NVPAYPIATPEGYYPGHKI
        +VEKASVKT EERKI+EERRKAATAEAKRELHEAKARHAAQKLRNRKS VLGGH H HQ PMEG AAT LGGA NVPAYPI +PEGY+PGHKI
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGA-NVPAYPIATPEGYYPGHKI

XP_008448704.1 PREDICTED: uncharacterized protein LOC103490795 [Cucumis melo]1.4e-3086.17Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVL-GGHLHYHQPPMEGAAATQLGG-ANVPAYPIATPEGYYPGHKI
        +VEKASVKT EERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKS VL GGHLH+H  P+EG AAT LGG  NVPAYPIA+PEGYYPGHKI
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVL-GGHLHYHQPPMEGAAATQLGG-ANVPAYPIATPEGYYPGHKI

XP_023553167.1 late embryogenesis abundant protein 6-like [Cucurbita pepo subsp. pepo]2.4e-2578.02Show/hide
Query:  VEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI
        V+KASVKT EERKI EERRKAA AEAKRELHEAKARHAAQKLR R+S VLG  LH HQPP+EG +A     ANVPAYPIA+PEGYYPGH+I
Subjt:  VEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI

XP_038906206.1 late embryogenesis abundant protein 6-like [Benincasa hispida]1.4e-3086.02Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVP-AYPIATPEGYYPGHKI
        +VEKASVKT EERKI EERRKAATAEAKRELHEAKARHAAQKLR++KS VLGGHLH+H PPMEGAAAT LG ANVP AYPI T EGYYPGHKI
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVP-AYPIATPEGYYPGHKI

TrEMBL top hitse value%identityAlignment
A0A0A0L1A9 Uncharacterized protein6.2e-3287.1Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGA-NVPAYPIATPEGYYPGHKI
        QVEKASVKT EERKI+EERRKAATAEAKRELHEAKARHAAQKLRNRKS VLGGH H HQ PMEG AAT LGGA NVPAYPI +PEGY+PGHKI
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGA-NVPAYPIATPEGYYPGHKI

A0A1S3BKB4 uncharacterized protein LOC1034907956.9e-3186.17Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVL-GGHLHYHQPPMEGAAATQLGG-ANVPAYPIATPEGYYPGHKI
        +VEKASVKT EERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKS VL GGHLH+H  P+EG AAT LGG  NVPAYPIA+PEGYYPGHKI
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVL-GGHLHYHQPPMEGAAATQLGG-ANVPAYPIATPEGYYPGHKI

A0A5D3CHS9 Seed maturation protein6.9e-3186.17Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVL-GGHLHYHQPPMEGAAATQLGG-ANVPAYPIATPEGYYPGHKI
        +VEKASVKT EERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKS VL GGHLH+H  P+EG AAT LGG  NVPAYPIA+PEGYYPGHKI
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVL-GGHLHYHQPPMEGAAATQLGG-ANVPAYPIATPEGYYPGHKI

A0A6J1E5Y8 late embryogenesis abundant protein 6-like isoform X27.4e-2575Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI
        +V+KAS KT EERKI EERRKAA AEAKRELHEAKARHAAQKLR R+S V+G  LH HQPP+EG +A     ANVPAYPIA+PEGYYPGH+I
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI

A0A6J1E6N7 late embryogenesis abundant protein 6-like isoform X17.4e-2575Show/hide
Query:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI
        +V+KAS KT EERKI EERRKAA AEAKRELHEAKARHAAQKLR R+S V+G  LH HQPP+EG +A     ANVPAYPIA+PEGYYPGH+I
Subjt:  QVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTACAGGTGGAGAAAGCGTCGGTGAAGACGGTGGAGGAGAGGAAGATTGTGGAGGAGAGAAGGAAGGCAGCGACGGCGGAGGCAAAGCGGGAGCTACATGAGGC
GAAAGCTAGACATGCTGCTCAAAAGCTAAGGAATAGGAAATCACAAGTACTTGGCGGCCATTTACACTATCATCAGCCTCCGATGGAAGGTGCCGCCGCCACACAGCTCG
GCGGAGCAAATGTTCCGGCTTATCCTATAGCCACCCCGGAGGGGTACTATCCCGGACATAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTACAGGTGGAGAAAGCGTCGGTGAAGACGGTGGAGGAGAGGAAGATTGTGGAGGAGAGAAGGAAGGCAGCGACGGCGGAGGCAAAGCGGGAGCTACATGAGGC
GAAAGCTAGACATGCTGCTCAAAAGCTAAGGAATAGGAAATCACAAGTACTTGGCGGCCATTTACACTATCATCAGCCTCCGATGGAAGGTGCCGCCGCCACACAGCTCG
GCGGAGCAAATGTTCCGGCTTATCCTATAGCCACCCCGGAGGGGTACTATCCCGGACATAAAATTTAA
Protein sequenceShow/hide protein sequence
MYLQVEKASVKTVEERKIVEERRKAATAEAKRELHEAKARHAAQKLRNRKSQVLGGHLHYHQPPMEGAAATQLGGANVPAYPIATPEGYYPGHKI