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Lsi07G012480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G012480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr07:18222850..18223149
RNA-Seq ExpressionLsi07G012480
SyntenyLsi07G012480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603228.1 hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0665.35Show/hide
Query:  MGRPILGTNGGGLGDVTLFSSGGLFLLSTILLSISLITITIFAC--SHSQNKKKKSDGGIDGGGGGTDGGGTDGGGGGDGGGGGGDGGGGGGCGCGGGGG
        MGR I   +GGGLGDVTLFSSGGL LL+T+LLS+SL+++ IFAC  S S NK+K++ GG  GGGGG  GG   GGGG  GGGGG  G  GGG GCGGGGG
Subjt:  MGRPILGTNGGGLGDVTLFSSGGLFLLSTILLSISLITITIFAC--SHSQNKKKKSDGGIDGGGGGTDGGGTDGGGGGDGGGGGGDGGGGGGCGCGGGGG

Query:  G
        G
Subjt:  G

KAG6603229.1 hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]6.3e-0556.18Show/hide
Query:  MGRPILGTNGGGLGDVTLFSSGGLFLLSTILLSISLITITIFACSHSQNKKKKSDGGIDGGGGGTDGGGTDGGGGGDGGGGGGDGGGGG
        MGRPI   +GGGLGDVTLFSSGGL LL+TIL+S+SL+++ IFAC  S  K K+                 +GGGGG G GGGG GGGGG
Subjt:  MGRPILGTNGGGLGDVTLFSSGGLFLLSTILLSISLITITIFACSHSQNKKKKSDGGIDGGGGGTDGGGTDGGGGGDGGGGGGDGGGGG

KAG6604774.1 hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0462.77Show/hide
Query:  MGRPILGTNGGGLG--DVTLFSSGGLFLLSTILLSISLITITIFACSHSQNKKKKSDGGIDGGGGGTDGGGTDGGGGGDGGGGGGDGGGGGGCG
        MGRPIL   GGG G  DVTL SSGGLFLLS ILLSISL+++ IFAC +S + K+K            DGGG  G GGGDGGGGGG GGG GGCG
Subjt:  MGRPILGTNGGGLG--DVTLFSSGGLFLLSTILLSISLITITIFACSHSQNKKKKSDGGIDGGGGGTDGGGTDGGGGGDGGGGGGDGGGGGGCG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGCCAATTCTTGGCACCAATGGTGGTGGCTTAGGAGATGTCACCTTGTTCAGTTCTGGTGGCTTATTTTTGCTTTCAACCATCCTGCTATCAATCTCTCTCAT
TACAATCACCATATTTGCTTGCAGTCACTCTCAAAACAAAAAGAAAAAATCTGATGGCGGCATCGACGGCGGCGGCGGCGGTACAGACGGTGGCGGCACGGATGGTGGCG
GAGGAGGAGATGGAGGTGGTGGCGGAGGAGATGGAGGCGGTGGTGGTGGTTGTGGCTGCGGAGGTGGAGGTGGAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGCCAATTCTTGGCACCAATGGTGGTGGCTTAGGAGATGTCACCTTGTTCAGTTCTGGTGGCTTATTTTTGCTTTCAACCATCCTGCTATCAATCTCTCTCAT
TACAATCACCATATTTGCTTGCAGTCACTCTCAAAACAAAAAGAAAAAATCTGATGGCGGCATCGACGGCGGCGGCGGCGGTACAGACGGTGGCGGCACGGATGGTGGCG
GAGGAGGAGATGGAGGTGGTGGCGGAGGAGATGGAGGCGGTGGTGGTGGTTGTGGCTGCGGAGGTGGAGGTGGAGGTTAA
Protein sequenceShow/hide protein sequence
MGRPILGTNGGGLGDVTLFSSGGLFLLSTILLSISLITITIFACSHSQNKKKKSDGGIDGGGGGTDGGGTDGGGGGDGGGGGGDGGGGGGCGCGGGGGG