; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi07G013040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi07G013040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHMA domain-containing protein
Genome locationchr07:19011963..19016321
RNA-Seq ExpressionLsi07G013040
SyntenyLsi07G013040
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7828410.1 Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 [Senna tora]9.2e-1769.32Show/hide
Query:  TSMKRFAGKSSRLENRLRSSSS--SDSFAASPLMISVFCSTLTFTSSLLSPGMSIRRYRALSSSLTSQPLLDPAPTPREAARNGSSMN
        +S+    G SS LEN L  SSS  SDSF  SP  I VFCST T TSSL SPG+SIRR RA SSSLTS PLLDPAPTPR+AARNG SMN
Subjt:  TSMKRFAGKSSRLENRLRSSSS--SDSFAASPLMISVFCSTLTFTSSLLSPGMSIRRYRALSSSLTSQPLLDPAPTPREAARNGSSMN

KGN55871.1 hypothetical protein Csa_010412 [Cucumis sativus]1.7e-1056.98Show/hide
Query:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSVKDFITKYFLKSPTNFHETIRNIQEVKNQRDT-RSQSRTNTSMK
        M+QSLLFSENLTPP F+VIVINANMSCNGCRQRVSQIVSKMS    +T    K        ++   + KNQ +T  SQ     S+K
Subjt:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSVKDFITKYFLKSPTNFHETIRNIQEVKNQRDT-RSQSRTNTSMK

XP_022965234.1 uncharacterized protein LOC111465148 isoform X1 [Cucurbita maxima]3.4e-1153.41Show/hide
Query:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS----------VKDFITKYFLKSPTNFHETIRNIQEVKNQRDTRSQS
        MEQSLLFSE+LTPPSFQVIVINANMSCNGCRQRVSQ++SK+S           K  + K  +K     HE      +  N    +SQS
Subjt:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS----------VKDFITKYFLKSPTNFHETIRNIQEVKNQRDTRSQS

XP_023553457.1 uncharacterized protein LOC111810871 [Cucurbita pepo subsp. pepo]1.5e-1152.75Show/hide
Query:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS----------VKDFITKYFLKSPTNFHETIRNIQEVKNQRDTRSQSRTN
        MEQSLLFSE+LTPPSFQVIVINANMSCNGCRQRVSQ++SK+S           K  + K  +K     HE      +  N +  +SQS T+
Subjt:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS----------VKDFITKYFLKSPTNFHETIRNIQEVKNQRDTRSQSRTN

XP_038903445.1 copper transport protein ATX1 [Benincasa hispida]8.9e-1295.24Show/hide
Query:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS
        MEQSLLFSENLTPPSFQVIVINANMSC GCRQRVSQIV KMS
Subjt:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS

TrEMBL top hitse value%identityAlignment
A0A0A0L6W5 HMA domain-containing protein8.2e-1156.98Show/hide
Query:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSVKDFITKYFLKSPTNFHETIRNIQEVKNQRDT-RSQSRTNTSMK
        M+QSLLFSENLTPP F+VIVINANMSCNGCRQRVSQIVSKMS    +T    K        ++   + KNQ +T  SQ     S+K
Subjt:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSVKDFITKYFLKSPTNFHETIRNIQEVKNQRDT-RSQSRTNTSMK

A0A2P5EQQ1 Uncharacterized protein9.0e-1064.79Show/hide
Query:  SSSSDSFAASPLMISVFCSTLTFTSSLLSPGMSIRRYRALSSSLTSQPLLDPAPTPRE----AARNGSSMN
        SS   SF+ SPLM+SVFCST TFTSS  SPGMS RR RA S SL SQP   P PTPRE    A R G SMN
Subjt:  SSSSDSFAASPLMISVFCSTLTFTSSLLSPGMSIRRYRALSSSLTSQPLLDPAPTPRE----AARNGSSMN

A0A6J1DJ58 uncharacterized protein LOC111021388 isoform X11.5e-0983.33Show/hide
Query:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS
        M+QSLLF ENLTPP FQVIVINANM CN CRQRVSQ++SKMS
Subjt:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS

A0A6J1HQF9 uncharacterized protein LOC111465148 isoform X11.6e-1153.41Show/hide
Query:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS----------VKDFITKYFLKSPTNFHETIRNIQEVKNQRDTRSQS
        MEQSLLFSE+LTPPSFQVIVINANMSCNGCRQRVSQ++SK+S           K  + K  +K     HE      +  N    +SQS
Subjt:  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS----------VKDFITKYFLKSPTNFHETIRNIQEVKNQRDTRSQS

A0A7J6GSP4 Uncharacterized protein1.2e-0957.5Show/hide
Query:  FAGKSSRLENRLRSSSSSDSFAASPLMISVFCSTLTFTSSLLSPGMSIRRYRALSSSLTSQPLLDPAPTPREAARNGSSM
        F+G+S  L      SSS  S   SPLM+ VFCST TFTSSLLSPGMS RR+ A S S  S P   P P PREA R+G SM
Subjt:  FAGKSSRLENRLRSSSSSDSFAASPLMISVFCSTLTFTSSLLSPGMSIRRYRALSSSLTSQPLLDPAPTPREAARNGSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35730.1 Heavy metal transport/detoxification superfamily protein2.5e-0431.18Show/hide
Query:  QSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS-VKDFIT---KYFLKSPTNFHETI----RNIQEVKNQRDTRSQSRTNTSMKRF
        ++L+  E L+ PSFQVI INA++ C  C+ RVS+IVSKM+ +++++    K  + +  +F   +    + +++V +Q  +++  R    +K F
Subjt:  QSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS-VKDFIT---KYFLKSPTNFHETI----RNIQEVKNQRDTRSQSRTNTSMKRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCTTCGTTTCAGGTGATTGTTATAAATGCAAATATGAGTTGCAATGGATGTCGTCAAAGAGTTTCTCAAAT
TGTCTCTAAAATGTCTGTCAAAGATTTCATCACAAAATACTTTCTCAAATCTCCAACCAACTTCCATGAAACTATCAGAAACATTCAAGAGGTCAAGAACCAGAGAGACA
CTAGAAGCCAAAGCAGAACAAACACCTCCATGAAAAGATTTGCAGGCAAATCGAGTCGGCTTGAGAATCGTCTGCGATCCTCCTCGTCTTCGGATTCTTTTGCTGCCTCG
CCTTTGATGATCAGTGTGTTCTGCTCCACACTCACCTTCACGTCGTCTTTGCTCAGTCCAGGCATGTCCATTCGTAGATACAGGGCATTGTCGTCTTCTCTCACGTCCCA
GCCCCTCCTTGATCCTGCTCCTACTCCTCGTGAAGCTGCCAGAAACGGATCCTCCATGAACTGA
mRNA sequenceShow/hide mRNA sequence
CTAACTAGAGAGAGAAATATAGAAAGAGAAACCCAAAAACTTTGAAAAAAACAAACAGAGTTGAAAATTTTCCATCTTTTTCACCAAATAAAAACCTCCATGGCTGCTTA
ACCACAAACACAGAGAGAGGAAATACAAGCCAAAAATGGAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCTTCGTTTCAGGTGATTGTTATAAATGCAAATATG
AGTTGCAATGGATGTCGTCAAAGAGTTTCTCAAATTGTCTCTAAAATGTCTGTCAAAGATTTCATCACAAAATACTTTCTCAAATCTCCAACCAACTTCCATGAAACTAT
CAGAAACATTCAAGAGGTCAAGAACCAGAGAGACACTAGAAGCCAAAGCAGAACAAACACCTCCATGAAAAGATTTGCAGGCAAATCGAGTCGGCTTGAGAATCGTCTGC
GATCCTCCTCGTCTTCGGATTCTTTTGCTGCCTCGCCTTTGATGATCAGTGTGTTCTGCTCCACACTCACCTTCACGTCGTCTTTGCTCAGTCCAGGCATGTCCATTCGT
AGATACAGGGCATTGTCGTCTTCTCTCACGTCCCAGCCCCTCCTTGATCCTGCTCCTACTCCTCGTGAAGCTGCCAGAAACGGATCCTCCATGAACTGA
Protein sequenceShow/hide protein sequence
MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSVKDFITKYFLKSPTNFHETIRNIQEVKNQRDTRSQSRTNTSMKRFAGKSSRLENRLRSSSSSDSFAAS
PLMISVFCSTLTFTSSLLSPGMSIRRYRALSSSLTSQPLLDPAPTPREAARNGSSMN